RNA–Protein interactions for RNA: ENST00000465076.5

SEC24C-203, Transcript of SEC24 homolog C, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24C, Length 4,668 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24C-203ENST00000465076 ATP6V1AP38606 617 aa13.3□□□□□ -0.28
SEC24C-203ENST00000465076 COPS6Q7L5N1 327 aa13.3□□□□□ -0.28
SEC24C-203ENST00000465076 RASSF8Q8NHQ8 419 aa13.3□□□□□ -0.28
SEC24C-203ENST00000465076 ANKRD18BA2A2Z9 1011 aa13.3□□□□□ -0.28
SEC24C-203ENST00000465076 ALDH1L1O75891 902 aa13.3□□□□□ -0.28
SEC24C-203ENST00000465076 CAVIN1Q6NZI2 390 aaKnown RBP13.3□□□□□ -0.28
SEC24C-203ENST00000465076 ACSBG1Q96GR2 724 aa13.3□□□□□ -0.28
SEC24C-203ENST00000465076 CHPF2Q9P2E5 772 aa13.3□□□□□ -0.28
SEC24C-203ENST00000465076 GPTP24298 496 aa13.29□□□□□ -0.28
SEC24C-203ENST00000465076 FKBP4Q02790 459 aaKnown RBP eCLIP13.29□□□□□ -0.28
SEC24C-203ENST00000465076 FOXD4L5Q5VV16 416 aaPredicted RBP13.29□□□□□ -0.28
SEC24C-203ENST00000465076 FOXD4L4Q8WXT5 416 aaPredicted RBP13.29□□□□□ -0.28
SEC24C-203ENST00000465076 DDX17Q92841 729 aaKnown RBP13.29□□□□□ -0.28
SEC24C-203ENST00000465076 CTDP1Q9Y5B0 961 aaPredicted RBP13.29□□□□□ -0.28
SEC24C-203ENST00000465076 RNF123Q5XPI4 1314 aa13.29□□□□□ -0.28
SEC24C-203ENST00000465076 KSR2Q6VAB6 950 aa13.29□□□□□ -0.28
SEC24C-203ENST00000465076 XAGE3Q8WTP9 111 aa13.29□□□□□ -0.28
SEC24C-203ENST00000465076 BCL11BQ9C0K0 894 aaPredicted RBP13.29□□□□□ -0.28
SEC24C-203ENST00000465076 VAMP4O75379 141 aa13.29□□□□□ -0.28
SEC24C-203ENST00000465076 TEX35Q5T0J7 233 aa13.29□□□□□ -0.28
SEC24C-203ENST00000465076 UNC13BO14795 1591 aa13.29□□□□□ -0.28
SEC24C-203ENST00000465076 RAD21O60216 631 aa13.28□□□□□ -0.28
SEC24C-203ENST00000465076 ANXA1P04083 346 aa13.28□□□□□ -0.28
SEC24C-203ENST00000465076 ATP5J2-PTCD1G3V325 749 aa13.28□□□□□ -0.28
SEC24C-203ENST00000465076 DHX16O60231 1041 aaKnown RBP13.28□□□□□ -0.28
SEC24C-203ENST00000465076 NBPF6Q5VWK0 638 aa13.28□□□□□ -0.28
SEC24C-203ENST00000465076 ZNF771Q7L3S4 317 aaPredicted RBP13.28□□□□□ -0.28
SEC24C-203ENST00000465076 UBE3BQ7Z3V4 1068 aa13.28□□□□□ -0.28
SEC24C-203ENST00000465076 NBPF4Q96M43 638 aa13.28□□□□□ -0.28
SEC24C-203ENST00000465076 CAVIN4Q5BKX8 364 aa13.27□□□□□ -0.28
SEC24C-203ENST00000465076 CDC5LQ99459 802 aaKnown RBP13.27□□□□□ -0.28
SEC24C-203ENST00000465076 KDM5CP41229 1560 aa13.27□□□□□ -0.28
SEC24C-203ENST00000465076 HOXB7P09629 217 aa13.27□□□□□ -0.28
SEC24C-203ENST00000465076 MCM5P33992 734 aa13.27□□□□□ -0.28
SEC24C-203ENST00000465076 ATP7BP35670 1465 aa13.27□□□□□ -0.29
SEC24C-203ENST00000465076 PDCP20941 246 aa13.27□□□□□ -0.29
SEC24C-203ENST00000465076 KAT6BQ8WYB5 2073 aa13.27□□□□□ -0.29
SEC24C-203ENST00000465076 MRPL50Q8N5N7 158 aaKnown RBP13.27□□□□□ -0.29
SEC24C-203ENST00000465076 LINS1Q8NG48 757 aa13.27□□□□□ -0.29
SEC24C-203ENST00000465076 LMTK2Q8IWU2 1503 aa13.26□□□□□ -0.29
SEC24C-203ENST00000465076 MX1P20591 662 aa13.26□□□□□ -0.29
SEC24C-203ENST00000465076 SASS6Q6UVJ0 657 aa13.26□□□□□ -0.29
SEC24C-203ENST00000465076 ARGLU1Q9NWB6 273 aaPredicted RBP13.26□□□□□ -0.29
SEC24C-203ENST00000465076 CTNNA3Q9UI47 895 aa13.26□□□□□ -0.29
SEC24C-203ENST00000465076 AATKQ6ZMQ8 1374 aa13.26□□□□□ -0.29
SEC24C-203ENST00000465076 GLI2P10070 1586 aa13.26□□□□□ -0.29
SEC24C-203ENST00000465076 RPGRQ92834 1020 aaKnown RBP13.26□□□□□ -0.29
SEC24C-203ENST00000465076 LRP2BPQ9P2M1 347 aa13.26□□□□□ -0.29
SEC24C-203ENST00000465076 RNF17Q9BXT8 1623 aaKnown RBP13.26□□□□□ -0.29
SEC24C-203ENST00000465076 WDR33Q9C0J8 1336 aaKnown RBP13.26□□□□□ -0.29
SEC24C-203ENST00000465076 SAFBQ15424 915 aaKnown RBP eCLIP13.25□□□□□ -0.29
SEC24C-203ENST00000465076 AGLP35573 1532 aa13.25□□□□□ -0.29
SEC24C-203ENST00000465076 NEK4P51957 841 aa13.25□□□□□ -0.29
SEC24C-203ENST00000465076 LDHAL6AQ6ZMR3 332 aa13.25□□□□□ -0.29
SEC24C-203ENST00000465076 DDX21Q9NR30 783 aaKnown RBP eCLIP13.25□□□□□ -0.29
SEC24C-203ENST00000465076 ZNF790Q6PG37 636 aa13.25□□□□□ -0.29
SEC24C-203ENST00000465076 UBE2Q2Q8WVN8 375 aa13.25□□□□□ -0.29
SEC24C-203ENST00000465076 TBC1D32Q96NH3 1257 aa13.25□□□□□ -0.29
SEC24C-203ENST00000465076 SYNMO15061 1565 aa13.25□□□□□ -0.29
SEC24C-203ENST00000465076 MAP3K4Q9Y6R4 1608 aa13.25□□□□□ -0.29
SEC24C-203ENST00000465076 KDM5AP29375 1690 aaKnown RBP13.25□□□□□ -0.29
SEC24C-203ENST00000465076 CHL1O00533 1208 aa13.25□□□□□ -0.29
SEC24C-203ENST00000465076 NUTM1Q86Y26 1132 aa13.24□□□□□ -0.29
SEC24C-203ENST00000465076 CCDC66A2RUB6 948 aa13.24□□□□□ -0.29
SEC24C-203ENST00000465076 PRPF40AO75400 957 aaKnown RBP13.24□□□□□ -0.29
SEC24C-203ENST00000465076 CLCN1P35523 988 aa13.24□□□□□ -0.29
SEC24C-203ENST00000465076 VPS53Q5VIR6 699 aa13.24□□□□□ -0.29
SEC24C-203ENST00000465076 TBC1D2Q9BYX2 928 aa13.24□□□□□ -0.29
SEC24C-203ENST00000465076 RAI14Q9P0K7 980 aa13.24□□□□□ -0.29
SEC24C-203ENST00000465076 ZNF335Q9H4Z2 1342 aaPredicted RBP13.24□□□□□ -0.29
SEC24C-203ENST00000465076 PRR36Q9H6K5 1346 aa13.24□□□□□ -0.29
SEC24C-203ENST00000465076 SLC5A1P13866 664 aa13.24□□□□□ -0.29
SEC24C-203ENST00000465076 DDX46Q7L014 1031 aaKnown RBP13.24□□□□□ -0.29
SEC24C-203ENST00000465076 ARHGEF25Q86VW2 580 aa13.24□□□□□ -0.29
SEC24C-203ENST00000465076 SETDB2Q96T68 719 aa13.24□□□□□ -0.29
SEC24C-203ENST00000465076 GRM8O00222 908 aa13.23□□□□□ -0.29
SEC24C-203ENST00000465076 NBPF5PQ86XG9 351 aaPredicted RBP13.23□□□□□ -0.29
SEC24C-203ENST00000465076 PDCL3Q9H2J4 239 aa13.23□□□□□ -0.29
SEC24C-203ENST00000465076 USP6P35125 1406 aa13.23□□□□□ -0.29
SEC24C-203ENST00000465076 TSPYL6Q8N831 410 aa13.23□□□□□ -0.29
SEC24C-203ENST00000465076 IDH1O75874 414 aaKnown RBP13.23□□□□□ -0.29
SEC24C-203ENST00000465076 XBP1P17861 261 aa13.23□□□□□ -0.29
SEC24C-203ENST00000465076 USP21Q9UK80 565 aa13.23□□□□□ -0.29
SEC24C-203ENST00000465076 RTCBQ9Y3I0 505 aaKnown RBP13.23□□□□□ -0.29
SEC24C-203ENST00000465076 ANKIB1Q9P2G1 1089 aa13.22□□□□□ -0.29
SEC24C-203ENST00000465076 ABCF2Q9UG63 623 aa13.22□□□□□ -0.29
SEC24C-203ENST00000465076 DIP2CQ9Y2E4 1556 aa13.22□□□□□ -0.29
SEC24C-203ENST00000465076 NAT10Q9H0A0 1025 aaKnown RBP13.22□□□□□ -0.29
SEC24C-203ENST00000465076 CYP46A1Q9Y6A2 500 aa13.22□□□□□ -0.29
SEC24C-203ENST00000465076 ANKARQ7Z5J8 1434 aa13.22□□□□□ -0.29
SEC24C-203ENST00000465076 ANKRD1Q15327 319 aa13.22□□□□□ -0.29
SEC24C-203ENST00000465076 BICD2Q8TD16 824 aa13.22□□□□□ -0.29
SEC24C-203ENST00000465076 KRT32Q14532 448 aa13.22□□□□□ -0.29
SEC24C-203ENST00000465076 CCDC152Q4G0S7 254 aa13.22□□□□□ -0.29
SEC24C-203ENST00000465076 CCDC73Q6ZRK6 1079 aa13.22□□□□□ -0.29
SEC24C-203ENST00000465076 SLC52A2Q9HAB3 445 aa13.22□□□□□ -0.29
SEC24C-203ENST00000465076 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.22□□□□□ -0.292e-6■■□□□ 12.9
SEC24C-203ENST00000465076 CCP110O43303 1012 aa13.21□□□□□ -0.29
SEC24C-203ENST00000465076 KIF24Q5T7B8 1368 aa13.21□□□□□ -0.29
SEC24C-203ENST00000465076 DZIP3Q86Y13 1208 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms