RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 RTF1Q92541 710 aaKnown RBP18.47■□□□□ 0.55
RPP40-203ENST00000464646 PIM2Q9P1W9 311 aa18.47■□□□□ 0.55
RPP40-203ENST00000464646 SOS1Q07889 1333 aaPredicted RBP18.47■□□□□ 0.55
RPP40-203ENST00000464646 KIF13BQ9NQT8 1826 aa18.46■□□□□ 0.55
RPP40-203ENST00000464646 MRC1P22897 1456 aa18.46■□□□□ 0.55
RPP40-203ENST00000464646 PPP2R1AP30153 589 aa18.46■□□□□ 0.55
RPP40-203ENST00000464646 DDR1Q08345 913 aa18.46■□□□□ 0.55
RPP40-203ENST00000464646 IL17REQ8NFR9 667 aa18.46■□□□□ 0.55
RPP40-203ENST00000464646 BTBD11A6QL63 1104 aa18.45■□□□□ 0.54
RPP40-203ENST00000464646 NEFMP07197 916 aa18.45■□□□□ 0.54
RPP40-203ENST00000464646 CHRNA5P30532 468 aa18.45■□□□□ 0.54
RPP40-203ENST00000464646 VSIG10Q8N0Z9 540 aa18.45■□□□□ 0.54
RPP40-203ENST00000464646 PHACTR3Q96KR7 559 aa18.45■□□□□ 0.54
RPP40-203ENST00000464646 NARFQ9UHQ1 456 aa18.45■□□□□ 0.54
RPP40-203ENST00000464646 KCPQ6ZWJ8 1503 aa18.44■□□□□ 0.54
RPP40-203ENST00000464646 NPHP1O15259 732 aa18.44■□□□□ 0.54
RPP40-203ENST00000464646 DALRD3Q5D0E6 543 aaKnown RBP18.44■□□□□ 0.54
RPP40-203ENST00000464646 ZNF790Q6PG37 636 aa18.44■□□□□ 0.54
RPP40-203ENST00000464646 ZNF496Q96IT1 587 aaPredicted RBP18.44■□□□□ 0.54
RPP40-203ENST00000464646 POLRMTO00411 1230 aaKnown RBP18.43■□□□□ 0.54
RPP40-203ENST00000464646 FMNL2Q96PY5 1086 aa18.43■□□□□ 0.54
RPP40-203ENST00000464646 TEX13AQ9BXU3 409 aaPredicted RBP18.43■□□□□ 0.54
RPP40-203ENST00000464646 RSPH6AQ9H0K4 717 aa18.43■□□□□ 0.54
RPP40-203ENST00000464646 A0A087WZG4 1122 aa18.42■□□□□ 0.54
RPP40-203ENST00000464646 TM4SF1P30408 202 aa18.42■□□□□ 0.54
RPP40-203ENST00000464646 NFIXQ14938 502 aa18.42■□□□□ 0.54
RPP40-203ENST00000464646 HEG1Q9ULI3 1381 aa18.42■□□□□ 0.54
RPP40-203ENST00000464646 KIAA1551Q9HCM1 1747 aa18.41■□□□□ 0.54
RPP40-203ENST00000464646 SERPINB2P05120 415 aa18.41■□□□□ 0.54
RPP40-203ENST00000464646 TBC1D2BQ9UPU7 963 aa18.41■□□□□ 0.54
RPP40-203ENST00000464646 MCM10Q7L590 875 aa18.4■□□□□ 0.54
RPP40-203ENST00000464646 ADAMTS7Q9UKP4 1686 aa18.4■□□□□ 0.54
RPP40-203ENST00000464646 KCNQ3O43525 872 aa18.39■□□□□ 0.53
RPP40-203ENST00000464646 A1BGP04217 495 aa18.39■□□□□ 0.53
RPP40-203ENST00000464646 KCNA3P22001 575 aa18.39■□□□□ 0.53
RPP40-203ENST00000464646 DCTN1Q14203 1278 aa18.39■□□□□ 0.53
RPP40-203ENST00000464646 UBR2Q8IWV8 1755 aa18.39■□□□□ 0.53
RPP40-203ENST00000464646 ADCY9O60503 1353 aa18.39■□□□□ 0.53
RPP40-203ENST00000464646 AFDNP55196 1824 aaKnown RBP18.38■□□□□ 0.53
RPP40-203ENST00000464646 C9orf131Q5VYM1 1079 aa18.38■□□□□ 0.53
RPP40-203ENST00000464646 GOLGB1Q14789 3259 aaKnown RBP18.37■□□□□ 0.53
RPP40-203ENST00000464646 PIP4K2AP48426 406 aaPredicted RBP18.37■□□□□ 0.53
RPP40-203ENST00000464646 BCL2L12Q9HB09 334 aa18.37■□□□□ 0.53
RPP40-203ENST00000464646 BRCA1P38398 1863 aaKnown RBP18.37■□□□□ 0.53
RPP40-203ENST00000464646 SIPA1L3O60292 1781 aaPredicted RBP18.36■□□□□ 0.53
RPP40-203ENST00000464646 EIF5P55010 431 aaKnown RBP18.36■□□□□ 0.53
RPP40-203ENST00000464646 TBC1D9BQ66K14 1250 aa18.36■□□□□ 0.53
RPP40-203ENST00000464646 C2CD5Q86YS7 1000 aa18.36■□□□□ 0.53
RPP40-203ENST00000464646 CCDC24Q8N4L8 307 aa18.36■□□□□ 0.53
RPP40-203ENST00000464646 RNF181Q9P0P0 153 aa18.36■□□□□ 0.53
RPP40-203ENST00000464646 ARFGEF1Q9Y6D6 1849 aa18.35■□□□□ 0.53
RPP40-203ENST00000464646 H0YIN7 160 aa18.35■□□□□ 0.53
RPP40-203ENST00000464646 IL6STP40189 918 aaPredicted RBP18.35■□□□□ 0.53
RPP40-203ENST00000464646 C16orf71Q8IYS4 520 aaPredicted RBP18.35■□□□□ 0.53
RPP40-203ENST00000464646 ZNF622Q969S3 477 aaKnown RBP eCLIP18.35■□□□□ 0.53
RPP40-203ENST00000464646 ZNF219Q9P2Y4 722 aaPredicted RBP18.35■□□□□ 0.53
RPP40-203ENST00000464646 DZIP3Q86Y13 1208 aaKnown RBP18.34■□□□□ 0.53
RPP40-203ENST00000464646 USP16Q9Y5T5 823 aa18.34■□□□□ 0.53
RPP40-203ENST00000464646 CEMIPQ8WUJ3 1361 aa18.33■□□□□ 0.53
RPP40-203ENST00000464646 SETDB2Q96T68 719 aa18.33■□□□□ 0.52
RPP40-203ENST00000464646 PRAMEF22A3QJZ6 481 aa18.32■□□□□ 0.52
RPP40-203ENST00000464646 SNRPA1P09661 255 aaKnown RBP18.32■□□□□ 0.52
RPP40-203ENST00000464646 RASSF7Q02833 373 aa18.32■□□□□ 0.52
RPP40-203ENST00000464646 TTLL6Q8N841 843 aa18.32■□□□□ 0.52
RPP40-203ENST00000464646 MIS18AQ9NYP9 233 aa18.32■□□□□ 0.52
RPP40-203ENST00000464646 MAPK8IP3Q9UPT6 1336 aa18.31■□□□□ 0.52
RPP40-203ENST00000464646 KIF3CO14782 793 aa18.31■□□□□ 0.52
RPP40-203ENST00000464646 NMRK2Q9NPI5 230 aa18.31■□□□□ 0.52
RPP40-203ENST00000464646 HTATSF1O43719 755 aaKnown RBP18.3■□□□□ 0.52
RPP40-203ENST00000464646 ST5P78524 1137 aa18.3■□□□□ 0.52
RPP40-203ENST00000464646 TAF7Q15545 349 aaPredicted RBP18.3■□□□□ 0.52
RPP40-203ENST00000464646 NGEFQ8N5V2 710 aa18.3■□□□□ 0.52
RPP40-203ENST00000464646 CARMIL3Q8ND23 1372 aa18.3■□□□□ 0.52
RPP40-203ENST00000464646 FAM177BA6PVY3 158 aa18.29■□□□□ 0.52
RPP40-203ENST00000464646 HSPA6P17066 643 aa18.29■□□□□ 0.52
RPP40-203ENST00000464646 PDE6BP35913 854 aa18.29■□□□□ 0.52
RPP40-203ENST00000464646 CNBD1Q8NA66 436 aa18.29■□□□□ 0.52
RPP40-203ENST00000464646 PNNQ9H307 717 aaKnown RBP18.29■□□□□ 0.52
RPP40-203ENST00000464646 KDM2BQ8NHM5 1336 aa18.28■□□□□ 0.52
RPP40-203ENST00000464646 CAMTA2O94983 1202 aa18.28■□□□□ 0.52
RPP40-203ENST00000464646 PRR5LQ6MZQ0 368 aa18.28■□□□□ 0.52
RPP40-203ENST00000464646 ZNF652Q9Y2D9 606 aa18.28■□□□□ 0.52
RPP40-203ENST00000464646 NRXN2Q9P2S2 1712 aa18.27■□□□□ 0.52
RPP40-203ENST00000464646 NBPF5PQ86XG9 351 aaPredicted RBP18.27■□□□□ 0.52
RPP40-203ENST00000464646 RRAGCQ9HB90 399 aa18.27■□□□□ 0.52
RPP40-203ENST00000464646 SCN7AQ01118 1682 aa18.27■□□□□ 0.52
RPP40-203ENST00000464646 DLG5Q8TDM6 1919 aa18.27■□□□□ 0.51
RPP40-203ENST00000464646 TOMM70O94826 608 aa18.26■□□□□ 0.51
RPP40-203ENST00000464646 DDX10Q13206 875 aaKnown RBP18.26■□□□□ 0.51
RPP40-203ENST00000464646 PNISRQ8TF01 805 aaKnown RBP18.26■□□□□ 0.51
RPP40-203ENST00000464646 BRIP1Q9BX63 1249 aa18.26■□□□□ 0.51
RPP40-203ENST00000464646 SBF1O95248 1867 aa18.25■□□□□ 0.51
RPP40-203ENST00000464646 CCDC88AQ3V6T2 1871 aa18.25■□□□□ 0.51
RPP40-203ENST00000464646 C21orf2O43822 256 aa18.25■□□□□ 0.51
RPP40-203ENST00000464646 GTF2E1P29083 439 aaPredicted RBP18.25■□□□□ 0.51
RPP40-203ENST00000464646 THUMPD2Q9BTF0 503 aaKnown RBP18.25■□□□□ 0.51
RPP40-203ENST00000464646 CACNA1SQ13698 1873 aa18.24■□□□□ 0.51
RPP40-203ENST00000464646 LMNB1P20700 586 aa18.24■□□□□ 0.51
RPP40-203ENST00000464646 NFE2L2Q16236 605 aa18.24■□□□□ 0.51
RPP40-203ENST00000464646 PDZRN3Q9UPQ7 1066 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms