RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 TTC21BQ7Z4L5 1316 aa10.72□□□□□ -0.69
HPS4-208ENST00000464362 BIN1O00499 593 aa10.72□□□□□ -0.69
HPS4-208ENST00000464362 IDH1O75874 414 aaKnown RBP10.72□□□□□ -0.69
HPS4-208ENST00000464362 SLC39A6Q13433 755 aa10.72□□□□□ -0.69
HPS4-208ENST00000464362 ISM2Q6H9L7 571 aa10.72□□□□□ -0.69
HPS4-208ENST00000464362 USP26Q9BXU7 913 aa10.72□□□□□ -0.69
HPS4-208ENST00000464362 OLFM4Q6UX06 510 aa10.72□□□□□ -0.69
HPS4-208ENST00000464362 UBE3BQ7Z3V4 1068 aa10.72□□□□□ -0.69
HPS4-208ENST00000464362 HAND2P61296 217 aa10.72□□□□□ -0.69
HPS4-208ENST00000464362 PKP1Q13835 747 aa10.72□□□□□ -0.69
HPS4-208ENST00000464362 CCDC158Q5M9N0 1113 aa10.72□□□□□ -0.69
HPS4-208ENST00000464362 ZNF396Q96N95 335 aaPredicted RBP10.72□□□□□ -0.69
HPS4-208ENST00000464362 CLASP1Q7Z460 1538 aa10.71□□□□□ -0.69
HPS4-208ENST00000464362 DNM1Q05193 864 aaKnown RBP10.71□□□□□ -0.69
HPS4-208ENST00000464362 CCDC57Q2TAC2 916 aa10.71□□□□□ -0.69
HPS4-208ENST00000464362 NUP133Q8WUM0 1156 aa10.71□□□□□ -0.69
HPS4-208ENST00000464362 A0A087WZG4 1122 aa10.71□□□□□ -0.7
HPS4-208ENST00000464362 FAM173BQ6P4H8 233 aa10.71□□□□□ -0.7
HPS4-208ENST00000464362 LRSAM1Q6UWE0 723 aa10.71□□□□□ -0.7
HPS4-208ENST00000464362 DDX46Q7L014 1031 aaKnown RBP10.71□□□□□ -0.7
HPS4-208ENST00000464362 DBF4Q9UBU7 674 aaPredicted RBP10.71□□□□□ -0.7
HPS4-208ENST00000464362 PHF8Q9UPP1 1060 aa10.71□□□□□ -0.7
HPS4-208ENST00000464362 LRRC59Q96AG4 307 aaKnown RBP10.7□□□□□ -0.7
HPS4-208ENST00000464362 PRDM11Q9NQV5 511 aa10.7□□□□□ -0.7
HPS4-208ENST00000464362 ABCC10Q5T3U5 1492 aa10.7□□□□□ -0.7
HPS4-208ENST00000464362 CWF19L2Q2TBE0 894 aaKnown RBP10.7□□□□□ -0.7
HPS4-208ENST00000464362 MTERF4Q7Z6M4 381 aaKnown RBP10.7□□□□□ -0.7
HPS4-208ENST00000464362 RBSNQ9H1K0 784 aa10.7□□□□□ -0.7
HPS4-208ENST00000464362 ZBTB3Q9H5J0 574 aa10.7□□□□□ -0.7
HPS4-208ENST00000464362 TBC1D2BQ9UPU7 963 aa10.7□□□□□ -0.7
HPS4-208ENST00000464362 ADGRL2O95490 1459 aa10.7□□□□□ -0.7
HPS4-208ENST00000464362 SPDYE4A6NLX3 237 aa10.7□□□□□ -0.7
HPS4-208ENST00000464362 ZNF521Q96K83 1311 aa10.7□□□□□ -0.7
HPS4-208ENST00000464362 RBM25P49756 843 aaKnown RBP10.7□□□□□ -0.7
HPS4-208ENST00000464362 MAPK8IP2Q13387 824 aaPredicted RBP10.7□□□□□ -0.7
HPS4-208ENST00000464362 SAMD1Q6SPF0 538 aaPredicted RBP10.7□□□□□ -0.7
HPS4-208ENST00000464362 PDCL2Q8N4E4 241 aa10.7□□□□□ -0.7
HPS4-208ENST00000464362 CFAP45Q9UL16 551 aa10.7□□□□□ -0.7
HPS4-208ENST00000464362 PPIP5K1Q6PFW1 1433 aa10.69□□□□□ -0.7
HPS4-208ENST00000464362 GOLIM4O00461 696 aa10.69□□□□□ -0.7
HPS4-208ENST00000464362 IPO7O95373 1038 aaKnown RBP10.69□□□□□ -0.7
HPS4-208ENST00000464362 CD2BP2O95400 341 aaKnown RBP10.69□□□□□ -0.7
HPS4-208ENST00000464362 EYA1Q99502 592 aa10.69□□□□□ -0.7
HPS4-208ENST00000464362 HOOK1Q9UJC3 728 aaKnown RBP10.69□□□□□ -0.7
HPS4-208ENST00000464362 PTPRTO14522 1441 aa10.69□□□□□ -0.7
HPS4-208ENST00000464362 GAS2L3Q86XJ1 694 aa10.69□□□□□ -0.7
HPS4-208ENST00000464362 CEP57L1Q8IYX8 460 aa10.69□□□□□ -0.7
HPS4-208ENST00000464362 G3V3G9 751 aa10.69□□□□□ -0.7
HPS4-208ENST00000464362 POLR3DP05423 398 aaPredicted RBP10.69□□□□□ -0.7
HPS4-208ENST00000464362 ZNF165P49910 485 aa10.69□□□□□ -0.7
HPS4-208ENST00000464362 DCAF8Q5TAQ9 597 aa10.69□□□□□ -0.7
HPS4-208ENST00000464362 ZBTB9Q96C00 473 aa10.69□□□□□ -0.7
HPS4-208ENST00000464362 ERCC6L2Q5T890 1561 aa10.69□□□□□ -0.7
HPS4-208ENST00000464362 MSH6P52701 1360 aa10.68□□□□□ -0.7
HPS4-208ENST00000464362 ATP8B2P98198 1209 aa10.68□□□□□ -0.7
HPS4-208ENST00000464362 CHRNA2Q15822 529 aa10.68□□□□□ -0.7
HPS4-208ENST00000464362 NCBP3Q53F19 620 aaKnown RBP10.68□□□□□ -0.7
HPS4-208ENST00000464362 LARP1Q6PKG0 1096 aaKnown RBP10.68□□□□□ -0.7
HPS4-208ENST00000464362 BRF1Q92994 677 aa10.68□□□□□ -0.7
HPS4-208ENST00000464362 ASXL2Q76L83 1435 aa10.68□□□□□ -0.7
HPS4-208ENST00000464362 SHANK2Q9UPX8 1470 aa10.68□□□□□ -0.7
HPS4-208ENST00000464362 PNMA6EA0A0J9YXQ4 647 aa10.68□□□□□ -0.7
HPS4-208ENST00000464362 ZSCAN22P10073 491 aaPredicted RBP10.68□□□□□ -0.7
HPS4-208ENST00000464362 AK2P54819 239 aa10.68□□□□□ -0.7
HPS4-208ENST00000464362 SCAND2PQ9GZW5 306 aaPredicted RBP10.68□□□□□ -0.7
HPS4-208ENST00000464362 TMX1Q9H3N1 280 aa10.68□□□□□ -0.7
HPS4-208ENST00000464362 ZHX1Q9UKY1 873 aaPredicted RBP10.68□□□□□ -0.7
HPS4-208ENST00000464362 RBM8AQ9Y5S9 174 aaKnown RBP10.68□□□□□ -0.7
HPS4-208ENST00000464362 CHMLP26374 656 aa10.68□□□□□ -0.7
HPS4-208ENST00000464362 CCDC144CPQ8IYA2 1237 aa10.68□□□□□ -0.7
HPS4-208ENST00000464362 C17orf53Q8N3J3 647 aaPredicted RBP10.68□□□□□ -0.7
HPS4-208ENST00000464362 IFIT1P09914 478 aaKnown RBP10.67□□□□□ -0.7
HPS4-208ENST00000464362 HSP90AA4PQ58FG1 418 aa10.67□□□□□ -0.7
HPS4-208ENST00000464362 TRMT2AQ8IZ69 625 aaKnown RBP10.67□□□□□ -0.7
HPS4-208ENST00000464362 ANKRD20A12PQ8NF67 263 aa10.67□□□□□ -0.7
HPS4-208ENST00000464362 SH2B1Q9NRF2 756 aaPredicted RBP10.67□□□□□ -0.7
HPS4-208ENST00000464362 CLIP2Q9UDT6 1046 aa10.67□□□□□ -0.7
HPS4-208ENST00000464362 MAP3K19Q56UN5 1328 aa10.67□□□□□ -0.7
HPS4-208ENST00000464362 DENND4BO75064 1496 aaPredicted RBP10.67□□□□□ -0.7
HPS4-208ENST00000464362 GSPT1P15170 499 aaKnown RBP10.67□□□□□ -0.7
HPS4-208ENST00000464362 UBE2HP62256 183 aa10.67□□□□□ -0.7
HPS4-208ENST00000464362 KRT32Q14532 448 aa10.67□□□□□ -0.7
HPS4-208ENST00000464362 CFAP100Q494V2 611 aa10.67□□□□□ -0.7
HPS4-208ENST00000464362 CHST3Q7LGC8 479 aa10.67□□□□□ -0.7
HPS4-208ENST00000464362 ANKLE2Q86XL3 938 aa10.67□□□□□ -0.7
HPS4-208ENST00000464362 ERICH4A6NGS2 130 aa10.67□□□□□ -0.7
HPS4-208ENST00000464362 ARGLU1Q9NWB6 273 aaPredicted RBP10.67□□□□□ -0.7
HPS4-208ENST00000464362 DACT1Q9NYF0 836 aa10.67□□□□□ -0.7
HPS4-208ENST00000464362 IGSF3O75054 1194 aa10.67□□□□□ -0.7
HPS4-208ENST00000464362 IL13P35225 146 aa10.67□□□□□ -0.7
HPS4-208ENST00000464362 KLHDC4Q8TBB5 520 aa10.67□□□□□ -0.7
HPS4-208ENST00000464362 NPC1L1Q9UHC9 1359 aa10.66□□□□□ -0.7
HPS4-208ENST00000464362 TNNT1P13805 278 aa10.66□□□□□ -0.7
HPS4-208ENST00000464362 GPTP24298 496 aa10.66□□□□□ -0.7
HPS4-208ENST00000464362 ABCF2Q9UG63 623 aa10.66□□□□□ -0.7
HPS4-208ENST00000464362 NAP1L1P55209 391 aaKnown RBP10.66□□□□□ -0.7
HPS4-208ENST00000464362 KIF6Q6ZMV9 814 aa10.66□□□□□ -0.7
HPS4-208ENST00000464362 FSIP1Q8NA03 581 aa10.66□□□□□ -0.7
HPS4-208ENST00000464362 EVI5LQ96CN4 794 aa10.66□□□□□ -0.7
HPS4-208ENST00000464362 ZKSCAN5Q9Y2L8 839 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms