RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 LMOD2Q6P5Q4 547 aa8.89□□□□□ -0.99
CLSTN1-204ENST00000464286 CCDC102AQ96A19 550 aa8.89□□□□□ -0.99
CLSTN1-204ENST00000464286 EMID1Q96A84 441 aaPredicted RBP8.89□□□□□ -0.99
CLSTN1-204ENST00000464286 CWC22Q9HCG8 908 aaKnown RBP8.89□□□□□ -0.99
CLSTN1-204ENST00000464286 INO80Q9ULG1 1556 aaPredicted RBP8.89□□□□□ -0.99
CLSTN1-204ENST00000464286 NSD3Q9BZ95 1437 aa8.88□□□□□ -0.99
CLSTN1-204ENST00000464286 RPGRIP1LQ68CZ1 1315 aa8.88□□□□□ -0.99
CLSTN1-204ENST00000464286 ATP6V1AP38606 617 aa8.88□□□□□ -0.99
CLSTN1-204ENST00000464286 ATF7IPQ6VMQ6 1270 aa8.88□□□□□ -0.99
CLSTN1-204ENST00000464286 SMC4Q9NTJ3 1288 aa8.88□□□□□ -0.99
CLSTN1-204ENST00000464286 ZFYVE16Q7Z3T8 1539 aa8.88□□□□□ -0.99
CLSTN1-204ENST00000464286 TRAPPC8Q9Y2L5 1435 aa8.88□□□□□ -0.99
CLSTN1-204ENST00000464286 QRICH2Q9H0J4 1663 aa8.88□□□□□ -0.99
CLSTN1-204ENST00000464286 K7ELQ4 463 aaPredicted RBP8.87□□□□□ -0.99
CLSTN1-204ENST00000464286 GFRA3O60609 400 aa8.87□□□□□ -0.99
CLSTN1-204ENST00000464286 CD46P15529 392 aa8.87□□□□□ -0.99
CLSTN1-204ENST00000464286 NCLP19338 710 aaKnown RBP8.87□□□□□ -0.99
CLSTN1-204ENST00000464286 BRPF1P55201 1214 aaPredicted RBP8.87□□□□□ -0.99
CLSTN1-204ENST00000464286 ZNF445P59923 1031 aa8.87□□□□□ -0.99
CLSTN1-204ENST00000464286 NUCB1Q02818 461 aa8.87□□□□□ -0.99
CLSTN1-204ENST00000464286 RABEP1Q15276 862 aa8.87□□□□□ -0.99
CLSTN1-204ENST00000464286 CASC1Q6TDU7 716 aa8.87□□□□□ -0.99
CLSTN1-204ENST00000464286 ANKLE1Q8NAG6 615 aa8.87□□□□□ -0.99
CLSTN1-204ENST00000464286 TNPO1Q92973 898 aaKnown RBP8.87□□□□□ -0.99
CLSTN1-204ENST00000464286 SLC6A16Q9GZN6 736 aa8.87□□□□□ -0.99
CLSTN1-204ENST00000464286 ZMYND15Q9H091 742 aa8.87□□□□□ -0.99
CLSTN1-204ENST00000464286 UHRF1BP1LA0JNW5 1464 aa8.87□□□□□ -0.99
CLSTN1-204ENST00000464286 MDM2Q00987 491 aaPredicted RBP8.86□□□□□ -0.99
CLSTN1-204ENST00000464286 ITPRIPQ8IWB1 547 aa8.86□□□□□ -0.99
CLSTN1-204ENST00000464286 ARHGAP45Q92619 1136 aa8.86□□□□□ -0.99
CLSTN1-204ENST00000464286 THAP11Q96EK4 314 aa8.86□□□□□ -0.99
CLSTN1-204ENST00000464286 SPSB2Q99619 263 aa8.86□□□□□ -0.99
CLSTN1-204ENST00000464286 PANK2Q9BZ23 570 aa8.86□□□□□ -0.99
CLSTN1-204ENST00000464286 SLC27A5Q9Y2P5 690 aa8.86□□□□□ -0.99
CLSTN1-204ENST00000464286 LMTK2Q8IWU2 1503 aa8.85□□□□□ -0.99
CLSTN1-204ENST00000464286 EVC2Q86UK5 1308 aa8.85□□□□□ -0.99
CLSTN1-204ENST00000464286 LAPTM4AQ15012 233 aa8.85□□□□□ -0.99
CLSTN1-204ENST00000464286 CHD1LQ86WJ1 897 aa8.85□□□□□ -0.99
CLSTN1-204ENST00000464286 SYAP1Q96A49 352 aaPredicted RBP8.85□□□□□ -0.99
CLSTN1-204ENST00000464286 CCDC39Q9UFE4 941 aa8.85□□□□□ -0.99
CLSTN1-204ENST00000464286 ANKRD26Q9UPS8 1709 aa8.85□□□□□ -0.99
CLSTN1-204ENST00000464286 KIF24Q5T7B8 1368 aa8.85□□□□□ -0.99
CLSTN1-204ENST00000464286 ANKRD36BQ8N2N9 1353 aa8.85□□□□□ -0.99
CLSTN1-204ENST00000464286 ATP7AQ04656 1500 aa8.85□□□□□ -0.99
CLSTN1-204ENST00000464286 EFCAB6Q5THR3 1501 aa8.85□□□□□ -0.99
CLSTN1-204ENST00000464286 MED14O60244 1454 aa8.84□□□□□ -0.99
CLSTN1-204ENST00000464286 DYNC1I1O14576 645 aa8.84□□□□□ -0.99
CLSTN1-204ENST00000464286 ZNF500O60304 480 aaPredicted RBP8.84□□□□□ -0.99
CLSTN1-204ENST00000464286 CDC45O75419 566 aa8.84□□□□□ -0.99
CLSTN1-204ENST00000464286 MBD3O95983 291 aa8.84□□□□□ -0.99
CLSTN1-204ENST00000464286 U2AF1L5P0DN76 240 aaPredicted RBP8.84□□□□□ -0.99
CLSTN1-204ENST00000464286 RLBP1P12271 317 aa8.84□□□□□ -0.99
CLSTN1-204ENST00000464286 SLC19A1P41440 591 aa8.84□□□□□ -0.99
CLSTN1-204ENST00000464286 U2AF1Q01081 240 aaKnown RBP eCLIP8.84□□□□□ -0.99
CLSTN1-204ENST00000464286 Q6ZNB5 142 aa8.84□□□□□ -0.99
CLSTN1-204ENST00000464286 KIAA1211Q6ZU35 1233 aa8.84□□□□□ -0.99
CLSTN1-204ENST00000464286 ASXL2Q76L83 1435 aa8.84□□□□□ -0.99
CLSTN1-204ENST00000464286 CARD14Q9BXL6 1004 aa8.84□□□□□ -0.99
CLSTN1-204ENST00000464286 DDX49Q9Y6V7 483 aaKnown RBP8.84□□□□□ -0.99
CLSTN1-204ENST00000464286 MCM2P49736 904 aa8.83□□□□□ -1
CLSTN1-204ENST00000464286 NEUROD2Q15784 382 aa8.83□□□□□ -1
CLSTN1-204ENST00000464286 LIAT1Q6ZQX7 453 aa8.83□□□□□ -1
CLSTN1-204ENST00000464286 ARXQ96QS3 562 aa8.83□□□□□ -1
CLSTN1-204ENST00000464286 ZBTB40Q9NUA8 1239 aa8.83□□□□□ -1
CLSTN1-204ENST00000464286 NOL7Q9UMY1 257 aaKnown RBP8.83□□□□□ -1
CLSTN1-204ENST00000464286 PPRC1Q5VV67 1664 aaKnown RBP8.83□□□□□ -1
CLSTN1-204ENST00000464286 ZFYVE9O95405 1425 aa8.82□□□□□ -1
CLSTN1-204ENST00000464286 PPIP5K1Q6PFW1 1433 aa8.82□□□□□ -1
CLSTN1-204ENST00000464286 PPLO60437 1756 aa8.82□□□□□ -1
CLSTN1-204ENST00000464286 ADGRB3O60242 1522 aa8.82□□□□□ -1
CLSTN1-204ENST00000464286 ZMYND10O75800 440 aa8.82□□□□□ -1
CLSTN1-204ENST00000464286 TRIM27P14373 513 aa8.82□□□□□ -1
CLSTN1-204ENST00000464286 TNNT2P45379 298 aaPredicted RBP8.82□□□□□ -1
CLSTN1-204ENST00000464286 MTHFSP49914 203 aa8.82□□□□□ -1
CLSTN1-204ENST00000464286 HMGN5P82970 282 aaKnown RBP8.82□□□□□ -1
CLSTN1-204ENST00000464286 PLA2G2CQ5R387 149 aa8.82□□□□□ -1
CLSTN1-204ENST00000464286 BARGINQ6ZT62 677 aa8.82□□□□□ -1
CLSTN1-204ENST00000464286 ZC3H15Q8WU90 426 aaKnown RBP8.82□□□□□ -1
CLSTN1-204ENST00000464286 NOS1P29475 1434 aa8.81□□□□□ -1
CLSTN1-204ENST00000464286 ZCCHC11Q5TAX3 1644 aaKnown RBP8.81□□□□□ -1
CLSTN1-204ENST00000464286 FMNL1O95466 1100 aaPredicted RBP8.81□□□□□ -1
CLSTN1-204ENST00000464286 LMOD3Q0VAK6 560 aa8.81□□□□□ -1
CLSTN1-204ENST00000464286 SPRYD7Q5W111 196 aa8.81□□□□□ -1
CLSTN1-204ENST00000464286 BRICD5Q6PL45 260 aa8.81□□□□□ -1
CLSTN1-204ENST00000464286 FAM160A2Q8N612 972 aaPredicted RBP8.81□□□□□ -1
CLSTN1-204ENST00000464286 GPCPD1Q9NPB8 672 aa8.81□□□□□ -1
CLSTN1-204ENST00000464286 FRMPD1Q5SYB0 1578 aa8.81□□□□□ -1
CLSTN1-204ENST00000464286 ABCA9Q8IUA7 1624 aa8.8□□□□□ -1
CLSTN1-204ENST00000464286 NRG2O14511 850 aaPredicted RBP8.8□□□□□ -1
CLSTN1-204ENST00000464286 LCE2BO14633 110 aa8.8□□□□□ -1
CLSTN1-204ENST00000464286 KDM4AO75164 1064 aa8.8□□□□□ -1
CLSTN1-204ENST00000464286 REC8O95072 547 aa8.8□□□□□ -1
CLSTN1-204ENST00000464286 BAG4O95429 457 aaKnown RBP8.8□□□□□ -1
CLSTN1-204ENST00000464286 EXOSC9Q06265 439 aaKnown RBP8.8□□□□□ -1
CLSTN1-204ENST00000464286 GRIPAP1Q4V328 841 aa8.8□□□□□ -1
CLSTN1-204ENST00000464286 CFAP70Q5T0N1 1121 aa8.8□□□□□ -1
CLSTN1-204ENST00000464286 INTS3Q68E01 1043 aaKnown RBP8.8□□□□□ -1
CLSTN1-204ENST00000464286 SASS6Q6UVJ0 657 aa8.8□□□□□ -1
CLSTN1-204ENST00000464286 SMAP1Q8IYB5 467 aaPredicted RBP8.8□□□□□ -1
CLSTN1-204ENST00000464286 FAM184AQ8NB25 1140 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms