RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 SOS1Q07889 1333 aaPredicted RBP19.77■□□□□ 0.76
SMC1A-204ENST00000463684 CYP19A1P11511 503 aaPredicted RBP19.77■□□□□ 0.76
SMC1A-204ENST00000463684 SLC52A2Q9HAB3 445 aa19.77■□□□□ 0.76
SMC1A-204ENST00000463684 TNRC6CQ9HCJ0 1690 aaKnown RBP19.77■□□□□ 0.76
SMC1A-204ENST00000463684 H0YIN7 160 aa19.76■□□□□ 0.75
SMC1A-204ENST00000463684 SERPINB2P05120 415 aa19.76■□□□□ 0.75
SMC1A-204ENST00000463684 PRELPP51888 382 aa19.76■□□□□ 0.75
SMC1A-204ENST00000463684 DPY19L2Q6NUT2 758 aa19.75■□□□□ 0.75
SMC1A-204ENST00000463684 C2CD5Q86YS7 1000 aa19.75■□□□□ 0.75
SMC1A-204ENST00000463684 LGR6Q9HBX8 967 aa19.75■□□□□ 0.75
SMC1A-204ENST00000463684 HSPA1AP0DMV8 641 aaKnown RBP19.74■□□□□ 0.75
SMC1A-204ENST00000463684 HSPA1BP0DMV9 641 aaKnown RBP19.74■□□□□ 0.75
SMC1A-204ENST00000463684 TJP1Q07157 1748 aa19.73■□□□□ 0.75
SMC1A-204ENST00000463684 COL15A1P39059 1388 aa19.73■□□□□ 0.75
SMC1A-204ENST00000463684 IL13P35225 146 aa19.73■□□□□ 0.75
SMC1A-204ENST00000463684 SLC39A6Q13433 755 aa19.73■□□□□ 0.75
SMC1A-204ENST00000463684 RNMTO43148 476 aaKnown RBP19.72■□□□□ 0.75
SMC1A-204ENST00000463684 ZBTB1Q9Y2K1 713 aa19.72■□□□□ 0.75
SMC1A-204ENST00000463684 PCNTO95613 3336 aa19.72■□□□□ 0.75
SMC1A-204ENST00000463684 SBF1O95248 1867 aa19.71■□□□□ 0.75
SMC1A-204ENST00000463684 EIF4G2P78344 907 aaKnown RBP eCLIP19.71■□□□□ 0.75
SMC1A-204ENST00000463684 BCL2L12Q9HB09 334 aa19.71■□□□□ 0.75
SMC1A-204ENST00000463684 CANXP27824 592 aaKnown RBP19.7■□□□□ 0.74
SMC1A-204ENST00000463684 BICDL1Q6ZP65 573 aa19.7■□□□□ 0.74
SMC1A-204ENST00000463684 VSIG10Q8N0Z9 540 aa19.7■□□□□ 0.74
SMC1A-204ENST00000463684 KNSTRNQ9Y448 316 aa19.7■□□□□ 0.74
SMC1A-204ENST00000463684 ADAMTS7Q9UKP4 1686 aa19.69■□□□□ 0.74
SMC1A-204ENST00000463684 NFKBIEO00221 500 aa19.69■□□□□ 0.74
SMC1A-204ENST00000463684 PDZRN3Q9UPQ7 1066 aa19.69■□□□□ 0.74
SMC1A-204ENST00000463684 A0A087WZG4 1122 aa19.68■□□□□ 0.74
SMC1A-204ENST00000463684 STARD3NLO95772 234 aa19.68■□□□□ 0.74
SMC1A-204ENST00000463684 ZNF622Q969S3 477 aaKnown RBP eCLIP19.68■□□□□ 0.743e-8■■■□□ 16.9
SMC1A-204ENST00000463684 POTECB2RU33 542 aa19.67■□□□□ 0.74
SMC1A-204ENST00000463684 HSPA5P11021 654 aaKnown RBP19.67■□□□□ 0.74
SMC1A-204ENST00000463684 PDE6BP35913 854 aa19.67■□□□□ 0.74
SMC1A-204ENST00000463684 TRIM26Q12899 539 aaPredicted RBP19.67■□□□□ 0.74
SMC1A-204ENST00000463684 ERFEQ4G0M1 354 aa19.67■□□□□ 0.74
SMC1A-204ENST00000463684 HMOX1P09601 288 aa19.66■□□□□ 0.74
SMC1A-204ENST00000463684 TTC5Q8N0Z6 440 aa19.66■□□□□ 0.74
SMC1A-204ENST00000463684 ZNF219Q9P2Y4 722 aaPredicted RBP19.66■□□□□ 0.74
SMC1A-204ENST00000463684 SCN11AQ9UI33 1791 aa19.65■□□□□ 0.74
SMC1A-204ENST00000463684 C21orf2O43822 256 aa19.65■□□□□ 0.74
SMC1A-204ENST00000463684 BRIP1Q9BX63 1249 aa19.65■□□□□ 0.74
SMC1A-204ENST00000463684 EIF5P55010 431 aaKnown RBP19.64■□□□□ 0.73
SMC1A-204ENST00000463684 MTHFSDQ2M296 383 aaKnown RBP19.64■□□□□ 0.73
SMC1A-204ENST00000463684 CARMIL3Q8ND23 1372 aa19.64■□□□□ 0.73
SMC1A-204ENST00000463684 NRXN2Q9P2S2 1712 aa19.64■□□□□ 0.73
SMC1A-204ENST00000463684 AFDNP55196 1824 aaKnown RBP19.63■□□□□ 0.73
SMC1A-204ENST00000463684 TBC1D9BQ66K14 1250 aa19.63■□□□□ 0.73
SMC1A-204ENST00000463684 CHADLQ6NUI6 762 aa19.63■□□□□ 0.73
SMC1A-204ENST00000463684 CREBZFQ9NS37 354 aa19.63■□□□□ 0.73
SMC1A-204ENST00000463684 MRC1P22897 1456 aa19.62■□□□□ 0.73
SMC1A-204ENST00000463684 NPHP1O15259 732 aa19.62■□□□□ 0.73
SMC1A-204ENST00000463684 NPM2Q86SE8 214 aaKnown RBP19.62■□□□□ 0.73
SMC1A-204ENST00000463684 TEX13AQ9BXU3 409 aaPredicted RBP19.62■□□□□ 0.73
SMC1A-204ENST00000463684 ZNF330Q9Y3S2 320 aaPredicted RBP19.62■□□□□ 0.73
SMC1A-204ENST00000463684 TAOK3Q9H2K8 898 aa19.61■□□□□ 0.73
SMC1A-204ENST00000463684 MKRN1Q9UHC7 482 aaKnown RBP19.61■□□□□ 0.73
SMC1A-204ENST00000463684 PRR5LQ6MZQ0 368 aa19.6■□□□□ 0.73
SMC1A-204ENST00000463684 CCDC24Q8N4L8 307 aa19.6■□□□□ 0.73
SMC1A-204ENST00000463684 CNKSR1Q969H4 720 aa19.6■□□□□ 0.73
SMC1A-204ENST00000463684 TBC1D2BQ9UPU7 963 aa19.6■□□□□ 0.73
SMC1A-204ENST00000463684 DLEC1Q9Y238 1755 aa19.6■□□□□ 0.73
SMC1A-204ENST00000463684 CLSPNQ9HAW4 1339 aa19.59■□□□□ 0.73
SMC1A-204ENST00000463684 LTBP3Q9NS15 1303 aa19.59■□□□□ 0.73
SMC1A-204ENST00000463684 DIAPH1O60610 1272 aaKnown RBP19.59■□□□□ 0.73
SMC1A-204ENST00000463684 DDNO94850 711 aaPredicted RBP19.59■□□□□ 0.73
SMC1A-204ENST00000463684 SETDB2Q96T68 719 aa19.59■□□□□ 0.73
SMC1A-204ENST00000463684 TIAM2Q8IVF5 1701 aa19.59■□□□□ 0.73
SMC1A-204ENST00000463684 TEFQ10587 303 aa19.58■□□□□ 0.72
SMC1A-204ENST00000463684 SOGA3Q5TF21 947 aa19.58■□□□□ 0.72
SMC1A-204ENST00000463684 ZNF496Q96IT1 587 aaPredicted RBP19.58■□□□□ 0.72
SMC1A-204ENST00000463684 IQCA1LA6NCM1 817 aa19.57■□□□□ 0.72
SMC1A-204ENST00000463684 IL6STP40189 918 aaPredicted RBP19.57■□□□□ 0.72
SMC1A-204ENST00000463684 ST5P78524 1137 aa19.57■□□□□ 0.72
SMC1A-204ENST00000463684 AMER1Q5JTC6 1135 aaPredicted RBP19.57■□□□□ 0.72
SMC1A-204ENST00000463684 STYK1Q6J9G0 422 aa19.57■□□□□ 0.72
SMC1A-204ENST00000463684 ZNF790Q6PG37 636 aa19.57■□□□□ 0.72
SMC1A-204ENST00000463684 CNBD1Q8NA66 436 aa19.57■□□□□ 0.72
SMC1A-204ENST00000463684 POTEIP0CG38 1075 aa19.56■□□□□ 0.72
SMC1A-204ENST00000463684 POTEJP0CG39 1038 aa19.56■□□□□ 0.72
SMC1A-204ENST00000463684 HEG1Q9ULI3 1381 aa19.56■□□□□ 0.72
SMC1A-204ENST00000463684 PRPF40BQ6NWY9 871 aaKnown RBP19.55■□□□□ 0.72
SMC1A-204ENST00000463684 MASTLQ96GX5 879 aa19.55■□□□□ 0.72
SMC1A-204ENST00000463684 PCGF6Q9BYE7 350 aa19.55■□□□□ 0.72
SMC1A-204ENST00000463684 CCDC88AQ3V6T2 1871 aa19.54■□□□□ 0.72
SMC1A-204ENST00000463684 GNAT3A8MTJ3 354 aa19.54■□□□□ 0.72
SMC1A-204ENST00000463684 SRGNP10124 158 aa19.54■□□□□ 0.72
SMC1A-204ENST00000463684 LDHDQ86WU2 507 aa19.54■□□□□ 0.72
SMC1A-204ENST00000463684 AIDAQ96BJ3 306 aa19.54■□□□□ 0.72
SMC1A-204ENST00000463684 FMNL2Q96PY5 1086 aa19.54■□□□□ 0.72
SMC1A-204ENST00000463684 FOXN1O15353 648 aa19.53■□□□□ 0.72
SMC1A-204ENST00000463684 A1BGP04217 495 aa19.53■□□□□ 0.72
SMC1A-204ENST00000463684 IL17REQ8NFR9 667 aa19.53■□□□□ 0.72
SMC1A-204ENST00000463684 CNTNAP1P78357 1384 aa19.53■□□□□ 0.72
SMC1A-204ENST00000463684 GAS2L2Q8NHY3 880 aa19.52■□□□□ 0.72
SMC1A-204ENST00000463684 PRDM10Q9NQV6 1147 aa19.52■□□□□ 0.72
SMC1A-204ENST00000463684 CAMTA2O94983 1202 aa19.51■□□□□ 0.71
SMC1A-204ENST00000463684 DZIP3Q86Y13 1208 aaKnown RBP19.51■□□□□ 0.71
SMC1A-204ENST00000463684 TAF1DQ9H5J8 278 aaPredicted RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms