RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 PARP4Q9UKK3 1724 aaKnown RBP12.62□□□□□ -0.39
MSH5-211ENST00000463144 TOM1L2Q6ZVM7 507 aa12.62□□□□□ -0.39
MSH5-211ENST00000463144 SSH3Q8TE77 659 aa12.62□□□□□ -0.39
MSH5-211ENST00000463144 ZNF496Q96IT1 587 aaPredicted RBP12.62□□□□□ -0.39
MSH5-211ENST00000463144 DDX21Q9NR30 783 aaKnown RBP eCLIP12.62□□□□□ -0.39
MSH5-211ENST00000463144 MAP3K2Q9Y2U5 619 aa12.62□□□□□ -0.39
MSH5-211ENST00000463144 RBM25P49756 843 aaKnown RBP12.61□□□□□ -0.39
MSH5-211ENST00000463144 KSR2Q6VAB6 950 aa12.61□□□□□ -0.39
MSH5-211ENST00000463144 TBC1D2Q9BYX2 928 aa12.61□□□□□ -0.39
MSH5-211ENST00000463144 HYPKQ9NX55 129 aa12.61□□□□□ -0.39
MSH5-211ENST00000463144 IBTKQ9P2D0 1353 aaPredicted RBP12.61□□□□□ -0.39
MSH5-211ENST00000463144 SALL3Q9BXA9 1300 aa12.6□□□□□ -0.39
MSH5-211ENST00000463144 CDC45O75419 566 aa12.6□□□□□ -0.39
MSH5-211ENST00000463144 BECN1Q14457 450 aa12.6□□□□□ -0.39
MSH5-211ENST00000463144 PPP1R42Q7Z4L9 355 aa12.6□□□□□ -0.39
MSH5-211ENST00000463144 HSP90AB1P08238 724 aaKnown RBP12.59□□□□□ -0.39
MSH5-211ENST00000463144 SDSP20132 328 aa12.59□□□□□ -0.39
MSH5-211ENST00000463144 POLA2Q14181 598 aa12.59□□□□□ -0.39
MSH5-211ENST00000463144 ZCRB1Q8TBF4 217 aaKnown RBP12.59□□□□□ -0.39
MSH5-211ENST00000463144 LRRCC1Q9C099 1032 aa12.59□□□□□ -0.39
MSH5-211ENST00000463144 OSBPL3Q9H4L5 887 aa12.59□□□□□ -0.39
MSH5-211ENST00000463144 USP16Q9Y5T5 823 aa12.59□□□□□ -0.39
MSH5-211ENST00000463144 SHANK3Q9BYB0 1731 aa12.59□□□□□ -0.39
MSH5-211ENST00000463144 PDE1AP54750 535 aa12.59□□□□□ -0.39
MSH5-211ENST00000463144 CABP4P57796 275 aa12.59□□□□□ -0.39
MSH5-211ENST00000463144 LARP1Q6PKG0 1096 aaKnown RBP12.59□□□□□ -0.39
MSH5-211ENST00000463144 CARD10Q9BWT7 1032 aa12.59□□□□□ -0.39
MSH5-211ENST00000463144 GLI3P10071 1580 aa12.59□□□□□ -0.39
MSH5-211ENST00000463144 MYT1Q01538 1121 aa12.58□□□□□ -0.4
MSH5-211ENST00000463144 AIMP1Q12904 312 aaKnown RBP12.58□□□□□ -0.4
MSH5-211ENST00000463144 CWF19L2Q2TBE0 894 aaKnown RBP12.58□□□□□ -0.4
MSH5-211ENST00000463144 TUBGCP6Q96RT7 1819 aa12.58□□□□□ -0.4
MSH5-211ENST00000463144 ALDH1L1O75891 902 aa12.58□□□□□ -0.4
MSH5-211ENST00000463144 LRP10Q7Z4F1 713 aa12.58□□□□□ -0.4
MSH5-211ENST00000463144 KIF2CQ99661 725 aa12.58□□□□□ -0.4
MSH5-211ENST00000463144 STRN4Q9NRL3 753 aa12.58□□□□□ -0.4
MSH5-211ENST00000463144 MYL6BP14649 208 aa12.57□□□□□ -0.4
MSH5-211ENST00000463144 TTC5Q8N0Z6 440 aa12.57□□□□□ -0.4
MSH5-211ENST00000463144 PCDH11XQ9BZA7 1347 aa12.57□□□□□ -0.4
MSH5-211ENST00000463144 PCDH11YQ9BZA8 1340 aa12.57□□□□□ -0.4
MSH5-211ENST00000463144 SRGAP3O43295 1099 aa12.57□□□□□ -0.4
MSH5-211ENST00000463144 SNRPA1P09661 255 aaKnown RBP12.57□□□□□ -0.4
MSH5-211ENST00000463144 IL2RBP14784 551 aa12.57□□□□□ -0.4
MSH5-211ENST00000463144 TSHZ3Q63HK5 1081 aa12.57□□□□□ -0.4
MSH5-211ENST00000463144 FMNL2Q96PY5 1086 aa12.57□□□□□ -0.4
MSH5-211ENST00000463144 PIP4K2AP48426 406 aaPredicted RBP12.56□□□□□ -0.4
MSH5-211ENST00000463144 NKX1-1Q15270 411 aaPredicted RBP12.56□□□□□ -0.4
MSH5-211ENST00000463144 LINS1Q8NG48 757 aa12.56□□□□□ -0.4
MSH5-211ENST00000463144 SURF6O75683 361 aaKnown RBP12.55□□□□□ -0.4
MSH5-211ENST00000463144 IGKV5-2P06315 115 aa12.55□□□□□ -0.4
MSH5-211ENST00000463144 EVA1CP58658 441 aa12.55□□□□□ -0.4
MSH5-211ENST00000463144 COPS6Q7L5N1 327 aa12.55□□□□□ -0.4
MSH5-211ENST00000463144 CERKQ8TCT0 537 aa12.55□□□□□ -0.4
MSH5-211ENST00000463144 XAGE3Q8WTP9 111 aa12.55□□□□□ -0.4
MSH5-211ENST00000463144 ANTXR1Q9H6X2 564 aa12.55□□□□□ -0.4
MSH5-211ENST00000463144 DDX58O95786 925 aaKnown RBP12.55□□□□□ -0.4
MSH5-211ENST00000463144 MTX1Q13505 466 aa12.55□□□□□ -0.4
MSH5-211ENST00000463144 KAZALD1Q96I82 304 aa12.55□□□□□ -0.4
MSH5-211ENST00000463144 C9orf78Q9NZ63 289 aaPredicted RBP12.55□□□□□ -0.4
MSH5-211ENST00000463144 STAP2Q9UGK3 403 aa12.55□□□□□ -0.4
MSH5-211ENST00000463144 UTYO14607 1347 aa12.54□□□□□ -0.4
MSH5-211ENST00000463144 RAB11FIP3O75154 756 aa12.54□□□□□ -0.4
MSH5-211ENST00000463144 MX1P20591 662 aa12.54□□□□□ -0.4
MSH5-211ENST00000463144 NFKBIBQ15653 356 aa12.54□□□□□ -0.4
MSH5-211ENST00000463144 DDX54Q8TDD1 881 aaKnown RBP12.54□□□□□ -0.4
MSH5-211ENST00000463144 IL1RAPL2Q9NP60 686 aa12.54□□□□□ -0.4
MSH5-211ENST00000463144 ROBO1Q9Y6N7 1651 aa12.54□□□□□ -0.4
MSH5-211ENST00000463144 LAMB4A4D0S4 1761 aa12.54□□□□□ -0.4
MSH5-211ENST00000463144 UBR2Q8IWV8 1755 aa12.54□□□□□ -0.4
MSH5-211ENST00000463144 ERVV-2B6SEH9 535 aa12.54□□□□□ -0.4
MSH5-211ENST00000463144 RIC3Q7Z5B4 369 aa12.54□□□□□ -0.4
MSH5-211ENST00000463144 GRM8O00222 908 aa12.53□□□□□ -0.4
MSH5-211ENST00000463144 RHPN1Q8TCX5 695 aa12.53□□□□□ -0.4
MSH5-211ENST00000463144 SUCLG2Q96I99 432 aa12.53□□□□□ -0.4
MSH5-211ENST00000463144 SLKQ9H2G2 1235 aaPredicted RBP12.53□□□□□ -0.4
MSH5-211ENST00000463144 PAPPAQ13219 1627 aa12.53□□□□□ -0.4
MSH5-211ENST00000463144 USP26Q9BXU7 913 aa12.53□□□□□ -0.4
MSH5-211ENST00000463144 BTG4Q9NY30 223 aa12.53□□□□□ -0.4
MSH5-211ENST00000463144 KCPQ6ZWJ8 1503 aa12.52□□□□□ -0.4
MSH5-211ENST00000463144 TOGARAM1Q9Y4F4 1720 aa12.52□□□□□ -0.4
MSH5-211ENST00000463144 NEURL1BA8MQ27 555 aa12.52□□□□□ -0.41
MSH5-211ENST00000463144 ANKRD13DQ6ZTN6 518 aa12.52□□□□□ -0.41
MSH5-211ENST00000463144 NUTM1Q86Y26 1132 aa12.52□□□□□ -0.41
MSH5-211ENST00000463144 METTL22Q9BUU2 404 aaPredicted RBP12.52□□□□□ -0.41
MSH5-211ENST00000463144 USP35Q9P2H5 1018 aa12.52□□□□□ -0.41
MSH5-211ENST00000463144 NBPF26B4DH59 902 aa12.51□□□□□ -0.41
MSH5-211ENST00000463144 NBPF14Q5TI25 921 aa12.51□□□□□ -0.41
MSH5-211ENST00000463144 NBPF10Q6P3W6 841 aaKnown RBP12.51□□□□□ -0.41
MSH5-211ENST00000463144 NBPF15Q8N660 670 aa12.51□□□□□ -0.41
MSH5-211ENST00000463144 SNX21Q969T3 373 aa12.51□□□□□ -0.41
MSH5-211ENST00000463144 RBM42Q9BTD8 480 aaKnown RBP12.51□□□□□ -0.41
MSH5-211ENST00000463144 RTL5Q5HYW3 569 aaPredicted RBP12.51□□□□□ -0.41
MSH5-211ENST00000463144 SPRYD3Q8NCJ5 442 aa12.51□□□□□ -0.41
MSH5-211ENST00000463144 KIF1BPQ96EK5 621 aa12.51□□□□□ -0.41
MSH5-211ENST00000463144 MYD88Q99836 296 aa12.51□□□□□ -0.41
MSH5-211ENST00000463144 ARFGEF2Q9Y6D5 1785 aa12.51□□□□□ -0.41
MSH5-211ENST00000463144 AHDC1Q5TGY3 1603 aaPredicted RBP12.51□□□□□ -0.41
MSH5-211ENST00000463144 GCKRQ14397 625 aa12.5□□□□□ -0.41
MSH5-211ENST00000463144 UNC5CLQ8IV45 518 aa12.5□□□□□ -0.41
MSH5-211ENST00000463144 BICC1Q9H694 974 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms