RNA–Protein interactions for RNA: ENST00000463143.5

DUBR-201, DPPA2 upstream binding RNA, humanhuman

TSL 3

Gene DUBR, Length 801 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-201ENST00000463143 USP16Q9Y5T5 823 aa11.66□□□□□ -0.54
DUBR-201ENST00000463143 GLI3P10071 1580 aa11.66□□□□□ -0.54
DUBR-201ENST00000463143 PTPRCP08575 1304 aa11.65□□□□□ -0.54
DUBR-201ENST00000463143 FAM196AQ6ZSG2 479 aa11.65□□□□□ -0.54
DUBR-201ENST00000463143 G2E3Q7L622 706 aa11.65□□□□□ -0.54
DUBR-201ENST00000463143 HYPKQ9NX55 129 aa11.65□□□□□ -0.54
DUBR-201ENST00000463143 RGS17Q9UGC6 210 aaPredicted RBP11.65□□□□□ -0.54
DUBR-201ENST00000463143 SCN11AQ9UI33 1791 aa11.64□□□□□ -0.55
DUBR-201ENST00000463143 STARD3NLO95772 234 aa11.64□□□□□ -0.55
DUBR-201ENST00000463143 MYCNP04198 464 aaPredicted RBP11.64□□□□□ -0.55
DUBR-201ENST00000463143 DDX21Q9NR30 783 aaKnown RBP eCLIP11.64□□□□□ -0.55
DUBR-201ENST00000463143 TNNQ9UQP3 1299 aa11.64□□□□□ -0.55
DUBR-201ENST00000463143 COG6Q9Y2V7 657 aa11.64□□□□□ -0.55
DUBR-201ENST00000463143 SHANK3Q9BYB0 1731 aa11.63□□□□□ -0.55
DUBR-201ENST00000463143 MYL6BP14649 208 aa11.63□□□□□ -0.55
DUBR-201ENST00000463143 FLIIQ13045 1269 aa11.63□□□□□ -0.55
DUBR-201ENST00000463143 FKBP5Q13451 457 aaPredicted RBP11.63□□□□□ -0.55
DUBR-201ENST00000463143 POTEAQ6S8J7 498 aa11.63□□□□□ -0.55
DUBR-201ENST00000463143 PPP4R2Q9NY27 417 aa11.63□□□□□ -0.55
DUBR-201ENST00000463143 ANXA1P04083 346 aa11.62□□□□□ -0.55
DUBR-201ENST00000463143 RLBP1P12271 317 aa11.62□□□□□ -0.55
DUBR-201ENST00000463143 ATP6V1AP38606 617 aa11.62□□□□□ -0.55
DUBR-201ENST00000463143 ITPRIPQ8IWB1 547 aa11.62□□□□□ -0.55
DUBR-201ENST00000463143 DNAJC10Q8IXB1 793 aa11.62□□□□□ -0.55
DUBR-201ENST00000463143 TMEM57Q8N5G2 664 aa11.62□□□□□ -0.55
DUBR-201ENST00000463143 PHAXQ9H814 394 aaKnown RBP11.62□□□□□ -0.55
DUBR-201ENST00000463143 THSD7AQ9UPZ6 1657 aa11.62□□□□□ -0.55
DUBR-201ENST00000463143 KDM3BQ7LBC6 1761 aa11.62□□□□□ -0.55
DUBR-201ENST00000463143 WNK3Q9BYP7 1800 aa11.61□□□□□ -0.55
DUBR-201ENST00000463143 DDX58O95786 925 aaKnown RBP11.61□□□□□ -0.55
DUBR-201ENST00000463143 A1BGP04217 495 aa11.61□□□□□ -0.55
DUBR-201ENST00000463143 AIMP1Q12904 312 aaKnown RBP11.61□□□□□ -0.55
DUBR-201ENST00000463143 MVPQ14764 893 aaKnown RBP11.61□□□□□ -0.55
DUBR-201ENST00000463143 PROSER3Q2NL68 480 aa11.61□□□□□ -0.55
DUBR-201ENST00000463143 SLC4A10Q6U841 1118 aa11.61□□□□□ -0.55
DUBR-201ENST00000463143 ILDR1Q86SU0 546 aaPredicted RBP11.61□□□□□ -0.55
DUBR-201ENST00000463143 BCL11BQ9C0K0 894 aaPredicted RBP11.61□□□□□ -0.55
DUBR-201ENST00000463143 CHMP4BQ9H444 224 aaKnown RBP11.61□□□□□ -0.55
DUBR-201ENST00000463143 ERBB4Q15303 1308 aa11.6□□□□□ -0.55
DUBR-201ENST00000463143 SIPA1L3O60292 1781 aaPredicted RBP11.6□□□□□ -0.55
DUBR-201ENST00000463143 LOC102724428A0A0B4J2F2 783 aa11.6□□□□□ -0.55
DUBR-201ENST00000463143 SIK1P57059 783 aa11.6□□□□□ -0.55
DUBR-201ENST00000463143 AAMPQ13685 434 aa11.6□□□□□ -0.55
DUBR-201ENST00000463143 PDIA6Q15084 440 aa11.6□□□□□ -0.55
DUBR-201ENST00000463143 PTF1AQ7RTS3 328 aa11.6□□□□□ -0.55
DUBR-201ENST00000463143 SLC4A9Q96Q91 983 aa11.6□□□□□ -0.55
DUBR-201ENST00000463143 DDX19BQ9UMR2 479 aa11.6□□□□□ -0.55
DUBR-201ENST00000463143 PALLDQ8WX93 1383 aa11.59□□□□□ -0.55
DUBR-201ENST00000463143 F6X3S4 739 aa11.59□□□□□ -0.55
DUBR-201ENST00000463143 CYP19A1P11511 503 aaPredicted RBP11.59□□□□□ -0.55
DUBR-201ENST00000463143 PIP4K2AP48426 406 aaPredicted RBP11.59□□□□□ -0.55
DUBR-201ENST00000463143 CCT4P50991 539 aaKnown RBP11.59□□□□□ -0.55
DUBR-201ENST00000463143 INTS3Q68E01 1043 aaKnown RBP11.59□□□□□ -0.55
DUBR-201ENST00000463143 COPS6Q7L5N1 327 aa11.59□□□□□ -0.55
DUBR-201ENST00000463143 NPM2Q86SE8 214 aaKnown RBP11.59□□□□□ -0.55
DUBR-201ENST00000463143 XAGE3Q8WTP9 111 aa11.59□□□□□ -0.55
DUBR-201ENST00000463143 KCPQ6ZWJ8 1503 aa11.59□□□□□ -0.55
DUBR-201ENST00000463143 ABCC4O15439 1325 aa11.59□□□□□ -0.55
DUBR-201ENST00000463143 TOGARAM1Q9Y4F4 1720 aa11.58□□□□□ -0.56
DUBR-201ENST00000463143 PI4KAP2A4QPH2 592 aa11.58□□□□□ -0.56
DUBR-201ENST00000463143 NBPF26B4DH59 902 aa11.58□□□□□ -0.56
DUBR-201ENST00000463143 TRIM37O94972 964 aa11.58□□□□□ -0.56
DUBR-201ENST00000463143 NBPF14Q5TI25 921 aa11.58□□□□□ -0.56
DUBR-201ENST00000463143 NBPF10Q6P3W6 841 aaKnown RBP11.58□□□□□ -0.56
DUBR-201ENST00000463143 KSR2Q6VAB6 950 aa11.58□□□□□ -0.56
DUBR-201ENST00000463143 ANKRD13DQ6ZTN6 518 aa11.58□□□□□ -0.56
DUBR-201ENST00000463143 RIC3Q7Z5B4 369 aa11.58□□□□□ -0.56
DUBR-201ENST00000463143 NBPF15Q8N660 670 aa11.58□□□□□ -0.56
DUBR-201ENST00000463143 PI4KAP1Q8N8J0 262 aa11.58□□□□□ -0.56
DUBR-201ENST00000463143 CCDC136Q96JN2 1154 aa11.58□□□□□ -0.56
DUBR-201ENST00000463143 DNAAF4Q8WXU2 420 aa11.57□□□□□ -0.56
DUBR-201ENST00000463143 ARXQ96QS3 562 aa11.57□□□□□ -0.56
DUBR-201ENST00000463143 MAP3K2Q9Y2U5 619 aa11.57□□□□□ -0.56
DUBR-201ENST00000463143 ZNF330Q9Y3S2 320 aaPredicted RBP11.57□□□□□ -0.56
DUBR-201ENST00000463143 ZBTB7BO15156 539 aaPredicted RBP11.56□□□□□ -0.56
DUBR-201ENST00000463143 ITPK1Q13572 414 aa11.56□□□□□ -0.56
DUBR-201ENST00000463143 SRCIN1Q9C0H9 1055 aa11.56□□□□□ -0.56
DUBR-201ENST00000463143 CCDC87Q9NVE4 849 aa11.56□□□□□ -0.56
DUBR-201ENST00000463143 CCNL1Q9UK58 526 aaPredicted RBP11.56□□□□□ -0.56
DUBR-201ENST00000463143 NEXNQ0ZGT2 675 aa11.55□□□□□ -0.56
DUBR-201ENST00000463143 B4GALNT3Q6L9W6 998 aa11.55□□□□□ -0.56
DUBR-201ENST00000463143 KIF6Q6ZMV9 814 aa11.55□□□□□ -0.56
DUBR-201ENST00000463143 LRP10Q7Z4F1 713 aa11.55□□□□□ -0.56
DUBR-201ENST00000463143 DOT1LQ8TEK3 1739 aa11.55□□□□□ -0.56
DUBR-201ENST00000463143 RGS12O14924 1447 aa11.54□□□□□ -0.56
DUBR-201ENST00000463143 VIRMAQ69YN4 1812 aaKnown RBP11.54□□□□□ -0.56
DUBR-201ENST00000463143 HMGB2P26583 209 aaKnown RBP11.54□□□□□ -0.56
DUBR-201ENST00000463143 IL6STP40189 918 aaPredicted RBP11.54□□□□□ -0.56
DUBR-201ENST00000463143 CRKLP46109 303 aaKnown RBP11.54□□□□□ -0.56
DUBR-201ENST00000463143 KCNQ4P56696 695 aa11.54□□□□□ -0.56
DUBR-201ENST00000463143 INTS5Q6P9B9 1019 aaKnown RBP11.54□□□□□ -0.56
DUBR-201ENST00000463143 TTLL7Q6ZT98 887 aa11.54□□□□□ -0.56
DUBR-201ENST00000463143 PLBD2Q8NHP8 589 aa11.54□□□□□ -0.56
DUBR-201ENST00000463143 ZBTB40Q9NUA8 1239 aa11.54□□□□□ -0.56
DUBR-201ENST00000463143 ZBTB1Q9Y2K1 713 aa11.54□□□□□ -0.56
DUBR-201ENST00000463143 PAPPAQ13219 1627 aa11.53□□□□□ -0.56
DUBR-201ENST00000463143 APBA3O96018 575 aa11.53□□□□□ -0.56
DUBR-201ENST00000463143 BEND3Q5T5X7 828 aa11.53□□□□□ -0.56
DUBR-201ENST00000463143 LINC00116Q8NCU8 138 aa11.53□□□□□ -0.56
DUBR-201ENST00000463143 LINS1Q8NG48 757 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms