RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 PIGBQ92521 554 aa18.99■□□□□ 0.63
RPRD1B-203ENST00000462548 C1orf115Q9H7X2 142 aa18.99■□□□□ 0.63
RPRD1B-203ENST00000462548 DBF4Q9UBU7 674 aaPredicted RBP18.99■□□□□ 0.63
RPRD1B-203ENST00000462548 USP21Q9UK80 565 aa18.99■□□□□ 0.63
RPRD1B-203ENST00000462548 TMOD3Q9NYL9 352 aa18.99■□□□□ 0.63
RPRD1B-203ENST00000462548 FAM98CQ17RN3 349 aaKnown RBP18.98■□□□□ 0.63
RPRD1B-203ENST00000462548 MARCH10Q8NA82 808 aaPredicted RBP18.98■□□□□ 0.63
RPRD1B-203ENST00000462548 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.98■□□□□ 0.63
RPRD1B-203ENST00000462548 CHMP4AQ9BY43 222 aa18.98■□□□□ 0.63
RPRD1B-203ENST00000462548 DDX21Q9NR30 783 aaKnown RBP eCLIP18.96■□□□□ 0.63
RPRD1B-203ENST00000462548 DOT1LQ8TEK3 1739 aa18.96■□□□□ 0.63
RPRD1B-203ENST00000462548 MEX3CQ5U5Q3 659 aaKnown RBP18.96■□□□□ 0.63
RPRD1B-203ENST00000462548 ASAP1Q9ULH1 1129 aa18.96■□□□□ 0.63
RPRD1B-203ENST00000462548 LAMB4A4D0S4 1761 aa18.96■□□□□ 0.63
RPRD1B-203ENST00000462548 PTCD1O75127 700 aaKnown RBP18.95■□□□□ 0.62
RPRD1B-203ENST00000462548 BCL9O00512 1426 aa18.95■□□□□ 0.62
RPRD1B-203ENST00000462548 N4BP2Q86UW6 1770 aaPredicted RBP18.95■□□□□ 0.62
RPRD1B-203ENST00000462548 ADCY9O60503 1353 aa18.95■□□□□ 0.62
RPRD1B-203ENST00000462548 PIP4K2AP48426 406 aaPredicted RBP18.95■□□□□ 0.62
RPRD1B-203ENST00000462548 CCT4P50991 539 aaKnown RBP18.95■□□□□ 0.62
RPRD1B-203ENST00000462548 MEIS3Q99687 375 aa18.95■□□□□ 0.62
RPRD1B-203ENST00000462548 ATG3Q9NT62 314 aa18.95■□□□□ 0.62
RPRD1B-203ENST00000462548 AFF2P51816 1311 aa18.94■□□□□ 0.62
RPRD1B-203ENST00000462548 KAT6BQ8WYB5 2073 aa18.94■□□□□ 0.62
RPRD1B-203ENST00000462548 LRP10Q7Z4F1 713 aa18.94■□□□□ 0.62
RPRD1B-203ENST00000462548 RWDD1Q9H446 243 aaPredicted RBP18.94■□□□□ 0.62
RPRD1B-203ENST00000462548 PXDNLA1KZ92 1463 aa18.94■□□□□ 0.62
RPRD1B-203ENST00000462548 PI4KAP2A4QPH2 592 aa18.93■□□□□ 0.62
RPRD1B-203ENST00000462548 HDAC1Q13547 482 aaPredicted RBP18.93■□□□□ 0.62
RPRD1B-203ENST00000462548 PI4KAP1Q8N8J0 262 aa18.93■□□□□ 0.62
RPRD1B-203ENST00000462548 CHMP4BQ9H444 224 aaKnown RBP18.93■□□□□ 0.62
RPRD1B-203ENST00000462548 HYPKQ9NX55 129 aa18.93■□□□□ 0.62
RPRD1B-203ENST00000462548 MYL6BP14649 208 aa18.93■□□□□ 0.62
RPRD1B-203ENST00000462548 PRIM1P49642 420 aaKnown RBP18.93■□□□□ 0.62
RPRD1B-203ENST00000462548 SIRT2Q8IXJ6 389 aa18.93■□□□□ 0.62
RPRD1B-203ENST00000462548 SYTL4Q96C24 671 aaPredicted RBP18.92■□□□□ 0.62
RPRD1B-203ENST00000462548 DNAAF4Q8WXU2 420 aa18.91■□□□□ 0.62
RPRD1B-203ENST00000462548 TSHZ2Q9NRE2 1034 aa18.91■□□□□ 0.62
RPRD1B-203ENST00000462548 ACSBG1Q96GR2 724 aa18.91■□□□□ 0.62
RPRD1B-203ENST00000462548 THSD7AQ9UPZ6 1657 aa18.9■□□□□ 0.62
RPRD1B-203ENST00000462548 ATP10DQ9P241 1426 aa18.9■□□□□ 0.62
RPRD1B-203ENST00000462548 AIMP1Q12904 312 aaKnown RBP18.9■□□□□ 0.62
RPRD1B-203ENST00000462548 NBPF26B4DH59 902 aa18.9■□□□□ 0.62
RPRD1B-203ENST00000462548 NBPF14Q5TI25 921 aa18.9■□□□□ 0.62
RPRD1B-203ENST00000462548 NBPF10Q6P3W6 841 aaKnown RBP18.9■□□□□ 0.62
RPRD1B-203ENST00000462548 NBPF15Q8N660 670 aa18.9■□□□□ 0.62
RPRD1B-203ENST00000462548 BEND3Q5T5X7 828 aa18.89■□□□□ 0.61
RPRD1B-203ENST00000462548 KSR2Q6VAB6 950 aa18.89■□□□□ 0.61
RPRD1B-203ENST00000462548 XAGE3Q8WTP9 111 aa18.89■□□□□ 0.61
RPRD1B-203ENST00000462548 MAP3K2Q9Y2U5 619 aa18.89■□□□□ 0.61
RPRD1B-203ENST00000462548 SLC4A9Q96Q91 983 aa18.89■□□□□ 0.61
RPRD1B-203ENST00000462548 ATRNO75882 1429 aa18.88■□□□□ 0.61
RPRD1B-203ENST00000462548 A1BGP04217 495 aa18.88■□□□□ 0.61
RPRD1B-203ENST00000462548 COPS6Q7L5N1 327 aa18.88■□□□□ 0.61
RPRD1B-203ENST00000462548 GJD4Q96KN9 370 aaPredicted RBP18.88■□□□□ 0.61
RPRD1B-203ENST00000462548 DNAJC10Q8IXB1 793 aa18.87■□□□□ 0.61
RPRD1B-203ENST00000462548 RBM42Q9BTD8 480 aaKnown RBP18.87■□□□□ 0.61
RPRD1B-203ENST00000462548 SRCIN1Q9C0H9 1055 aa18.87■□□□□ 0.61
RPRD1B-203ENST00000462548 USP44Q9H0E7 712 aa18.87■□□□□ 0.61
RPRD1B-203ENST00000462548 PDZRN3Q9UPQ7 1066 aa18.87■□□□□ 0.61
RPRD1B-203ENST00000462548 A0A0G2JS52 829 aa18.86■□□□□ 0.61
RPRD1B-203ENST00000462548 CEP85Q6P2H3 762 aa18.86■□□□□ 0.61
RPRD1B-203ENST00000462548 SMC5Q8IY18 1101 aa18.86■□□□□ 0.61
RPRD1B-203ENST00000462548 ERBB4Q15303 1308 aa18.86■□□□□ 0.61
RPRD1B-203ENST00000462548 KCNQ2O43526 872 aa18.85■□□□□ 0.61
RPRD1B-203ENST00000462548 VSIG10Q8N0Z9 540 aa18.85■□□□□ 0.61
RPRD1B-203ENST00000462548 ANKRD44Q8N8A2 993 aa18.85■□□□□ 0.61
RPRD1B-203ENST00000462548 RGS3P49796 1198 aa18.84■□□□□ 0.61
RPRD1B-203ENST00000462548 DDX58O95786 925 aaKnown RBP18.84■□□□□ 0.61
RPRD1B-203ENST00000462548 TRPC5Q9UL62 973 aaPredicted RBP18.83■□□□□ 0.61
RPRD1B-203ENST00000462548 TJP1Q07157 1748 aa18.83■□□□□ 0.6
RPRD1B-203ENST00000462548 CWF19L2Q2TBE0 894 aaKnown RBP18.83■□□□□ 0.6
RPRD1B-203ENST00000462548 RIC3Q7Z5B4 369 aa18.83■□□□□ 0.6
RPRD1B-203ENST00000462548 GNAI2P04899 355 aa18.82■□□□□ 0.6
RPRD1B-203ENST00000462548 GNAI3P08754 354 aa18.82■□□□□ 0.6
RPRD1B-203ENST00000462548 NBPF7P0C2Y1 421 aaPredicted RBP18.82■□□□□ 0.6
RPRD1B-203ENST00000462548 FAM182BQ5T319 152 aa18.82■□□□□ 0.6
RPRD1B-203ENST00000462548 TTLL7Q6ZT98 887 aa18.82■□□□□ 0.6
RPRD1B-203ENST00000462548 ANKRD13DQ6ZTN6 518 aa18.82■□□□□ 0.6
RPRD1B-203ENST00000462548 RPAP2Q8IXW5 612 aaPredicted RBP18.82■□□□□ 0.6
RPRD1B-203ENST00000462548 IGKV5-2P06315 115 aa18.81■□□□□ 0.6
RPRD1B-203ENST00000462548 PTF1AQ7RTS3 328 aa18.81■□□□□ 0.6
RPRD1B-203ENST00000462548 LRRFIP2Q9Y608 721 aaKnown RBP18.81■□□□□ 0.6
RPRD1B-203ENST00000462548 ARFGEF2Q9Y6D5 1785 aa18.81■□□□□ 0.6
RPRD1B-203ENST00000462548 ONECUT3O60422 494 aaPredicted RBP18.81■□□□□ 0.6
RPRD1B-203ENST00000462548 QTRT2Q9H974 415 aaKnown RBP18.81■□□□□ 0.6
RPRD1B-203ENST00000462548 ALDH1L1O75891 902 aa18.8■□□□□ 0.6
RPRD1B-203ENST00000462548 TEX13AQ9BXU3 409 aaPredicted RBP18.8■□□□□ 0.6
RPRD1B-203ENST00000462548 UBTFL1P0CB47 393 aaPredicted RBP18.8■□□□□ 0.6
RPRD1B-203ENST00000462548 LINS1Q8NG48 757 aa18.8■□□□□ 0.6
RPRD1B-203ENST00000462548 METTL22Q9BUU2 404 aaPredicted RBP18.8■□□□□ 0.6
RPRD1B-203ENST00000462548 CYP19A1P11511 503 aaPredicted RBP18.79■□□□□ 0.6
RPRD1B-203ENST00000462548 MYD88Q99836 296 aa18.79■□□□□ 0.6
RPRD1B-203ENST00000462548 PDE4AP27815 886 aa18.79■□□□□ 0.6
RPRD1B-203ENST00000462548 NUP188Q5SRE5 1749 aa18.78■□□□□ 0.6
RPRD1B-203ENST00000462548 NUCB1Q02818 461 aa18.78■□□□□ 0.6
RPRD1B-203ENST00000462548 PLBD2Q8NHP8 589 aa18.78■□□□□ 0.6
RPRD1B-203ENST00000462548 GCC1Q96CN9 775 aa18.78■□□□□ 0.6
RPRD1B-203ENST00000462548 STARD3NLO95772 234 aa18.78■□□□□ 0.6
RPRD1B-203ENST00000462548 SEPT12Q8IYM1 358 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms