RNA–Protein interactions for RNA: ENST00000462410.5

TRAF5-204, Transcript of TNF receptor associated factor 5, human

TSL 2

Gene TRAF5, Length 4,958 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAF5-204	ENST00000462410	TFCP2L1	Q9NZI6	479 aa		11.77	□□□□□ -0.53
TRAF5-204	ENST00000462410	SUPT20H	Q8NEM7	779 aa		11.77	□□□□□ -0.53
TRAF5-204	ENST00000462410	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
TRAF5-204	ENST00000462410	DHX8	Q14562	1220 aa	Known RBP	11.76	□□□□□ -0.53
TRAF5-204	ENST00000462410	TTC37	Q6PGP7	1564 aa		11.76	□□□□□ -0.53
TRAF5-204	ENST00000462410	ANKAR	Q7Z5J8	1434 aa		11.76	□□□□□ -0.53
TRAF5-204	ENST00000462410	SLK	Q9H2G2	1235 aa	Predicted RBP	11.76	□□□□□ -0.53
TRAF5-204	ENST00000462410		A0A1W2PP64	1363 aa		11.76	□□□□□ -0.53
TRAF5-204	ENST00000462410	ZFY	P08048	801 aa	Predicted RBP	11.76	□□□□□ -0.53
TRAF5-204	ENST00000462410	HSP90AB2P	Q58FF8	381 aa		11.76	□□□□□ -0.53
TRAF5-204	ENST00000462410	TRAPPC3L	Q5T215	181 aa		11.76	□□□□□ -0.53
TRAF5-204	ENST00000462410	SPRYD3	Q8NCJ5	442 aa		11.76	□□□□□ -0.53
TRAF5-204	ENST00000462410	CDK5RAP3	Q96JB5	506 aa		11.76	□□□□□ -0.53
TRAF5-204	ENST00000462410	SIL1	Q9H173	461 aa		11.76	□□□□□ -0.53
TRAF5-204	ENST00000462410	PLCG2	P16885	1265 aa		11.76	□□□□□ -0.53
TRAF5-204	ENST00000462410	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.76	□□□□□ -0.53
TRAF5-204	ENST00000462410	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.76	□□□□□ -0.53
TRAF5-204	ENST00000462410	POLK	Q9UBT6	870 aa		11.76	□□□□□ -0.53
TRAF5-204	ENST00000462410	CHD1L	Q86WJ1	897 aa		11.76	□□□□□ -0.53
TRAF5-204	ENST00000462410	HOOK2	Q96ED9	719 aa		11.76	□□□□□ -0.53
TRAF5-204	ENST00000462410	POLR3D	P05423	398 aa	Predicted RBP	11.75	□□□□□ -0.53
TRAF5-204	ENST00000462410	PDE6B	P35913	854 aa		11.75	□□□□□ -0.53
TRAF5-204	ENST00000462410	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
TRAF5-204	ENST00000462410	ZNF622	Q969S3	477 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
TRAF5-204	ENST00000462410	ERVV-2	B6SEH9	535 aa		11.75	□□□□□ -0.53
TRAF5-204	ENST00000462410	KSR2	Q6VAB6	950 aa		11.75	□□□□□ -0.53
TRAF5-204	ENST00000462410	ZNF804A	Q7Z570	1209 aa		11.75	□□□□□ -0.53
TRAF5-204	ENST00000462410	LDHAL6A	Q6ZMR3	332 aa		11.75	□□□□□ -0.53
TRAF5-204	ENST00000462410	CABP5	Q9NP86	173 aa		11.75	□□□□□ -0.53
TRAF5-204	ENST00000462410	PDZRN3	Q9UPQ7	1066 aa		11.75	□□□□□ -0.53
TRAF5-204	ENST00000462410	IDH1	O75874	414 aa	Known RBP	11.74	□□□□□ -0.53
TRAF5-204	ENST00000462410	OGFOD1	Q8N543	542 aa		11.74	□□□□□ -0.53
TRAF5-204	ENST00000462410	JDP2	Q8WYK2	163 aa		11.74	□□□□□ -0.53
TRAF5-204	ENST00000462410	CDCA7L	Q96GN5	454 aa		11.74	□□□□□ -0.53
TRAF5-204	ENST00000462410	RARS	P54136	660 aa	Known RBP	11.74	□□□□□ -0.53
TRAF5-204	ENST00000462410	NAT10	Q9H0A0	1025 aa	Known RBP	11.74	□□□□□ -0.53
TRAF5-204	ENST00000462410	INSR	P06213	1382 aa		11.74	□□□□□ -0.53
TRAF5-204	ENST00000462410	ERBB4	Q15303	1308 aa		11.74	□□□□□ -0.53
TRAF5-204	ENST00000462410	MAP3K19	Q56UN5	1328 aa		11.74	□□□□□ -0.53
TRAF5-204	ENST00000462410	RRP12	Q5JTH9	1297 aa	Known RBP	11.74	□□□□□ -0.53
TRAF5-204	ENST00000462410	BICD2	Q8TD16	824 aa		11.74	□□□□□ -0.53
TRAF5-204	ENST00000462410	RBM17	Q96I25	401 aa	Known RBP	11.74	□□□□□ -0.53
TRAF5-204	ENST00000462410	LETM1	O95202	739 aa	Predicted RBP	11.74	□□□□□ -0.53
TRAF5-204	ENST00000462410	BLOC1S2	Q6QNY1	142 aa		11.74	□□□□□ -0.53
TRAF5-204	ENST00000462410	MAP3K2	Q9Y2U5	619 aa		11.74	□□□□□ -0.53
TRAF5-204	ENST00000462410	LINS1	Q8NG48	757 aa		11.73	□□□□□ -0.53
TRAF5-204	ENST00000462410	ZBTB3	Q9H5J0	574 aa		11.73	□□□□□ -0.53
TRAF5-204	ENST00000462410	ABCF2	Q9UG63	623 aa		11.73	□□□□□ -0.53
TRAF5-204	ENST00000462410	PTPRT	O14522	1441 aa		11.73	□□□□□ -0.53
TRAF5-204	ENST00000462410	ABCA9	Q8IUA7	1624 aa		11.73	□□□□□ -0.53
TRAF5-204	ENST00000462410	PARD3	Q8TEW0	1356 aa		11.73	□□□□□ -0.53
TRAF5-204	ENST00000462410	ATP2B2	Q01814	1243 aa		11.73	□□□□□ -0.53
TRAF5-204	ENST00000462410	IQCA1	Q86XH1	822 aa		11.73	□□□□□ -0.53
TRAF5-204	ENST00000462410	DZIP3	Q86Y13	1208 aa	Known RBP	11.73	□□□□□ -0.53
TRAF5-204	ENST00000462410	TESK2	Q96S53	571 aa		11.73	□□□□□ -0.53
TRAF5-204	ENST00000462410	RNMT	O43148	476 aa	Known RBP	11.73	□□□□□ -0.53
TRAF5-204	ENST00000462410	IL15	P40933	162 aa	Predicted RBP	11.73	□□□□□ -0.53
TRAF5-204	ENST00000462410	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.73	□□□□□ -0.53
TRAF5-204	ENST00000462410	CCDC87	Q9NVE4	849 aa		11.73	□□□□□ -0.53
TRAF5-204	ENST00000462410	ABCC3	O15438	1527 aa		11.73	□□□□□ -0.53
TRAF5-204	ENST00000462410	ATP7B	P35670	1465 aa		11.73	□□□□□ -0.53
TRAF5-204	ENST00000462410	VPS37C	A5D8V6	355 aa	Predicted RBP	11.72	□□□□□ -0.53
TRAF5-204	ENST00000462410		B4DLN1	442 aa		11.72	□□□□□ -0.53
TRAF5-204	ENST00000462410	MRPL12	P52815	198 aa	Known RBP	11.72	□□□□□ -0.53
TRAF5-204	ENST00000462410	CCNL1	Q9UK58	526 aa	Predicted RBP	11.72	□□□□□ -0.53
TRAF5-204	ENST00000462410	TET3	O43151	1660 aa		11.72	□□□□□ -0.53
TRAF5-204	ENST00000462410	ZNF444	Q8N0Y2	327 aa	Predicted RBP	11.72	□□□□□ -0.53
TRAF5-204	ENST00000462410	SSH1	Q8WYL5	1049 aa		11.72	□□□□□ -0.53
TRAF5-204	ENST00000462410	MKNK2	Q9HBH9	465 aa		11.72	□□□□□ -0.53
TRAF5-204	ENST00000462410	MPHOSPH10	O00566	681 aa	Known RBP	11.72	□□□□□ -0.53
TRAF5-204	ENST00000462410	NAPB	Q9H115	298 aa		11.72	□□□□□ -0.53
TRAF5-204	ENST00000462410	THRAP3	Q9Y2W1	955 aa	Known RBP	11.72	□□□□□ -0.53
TRAF5-204	ENST00000462410	MX1	P20591	662 aa		11.72	□□□□□ -0.53
TRAF5-204	ENST00000462410	LTK	P29376	864 aa		11.72	□□□□□ -0.53
TRAF5-204	ENST00000462410	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.72	□□□□□ -0.53
TRAF5-204	ENST00000462410	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.71	□□□□□ -0.53
TRAF5-204	ENST00000462410	SEC63	Q9UGP8	760 aa	Known RBP	11.71	□□□□□ -0.53
TRAF5-204	ENST00000462410	MAST3	O60307	1309 aa		11.71	□□□□□ -0.53
TRAF5-204	ENST00000462410	SYNM	O15061	1565 aa		11.71	□□□□□ -0.53
TRAF5-204	ENST00000462410	TSPOAP1	O95153	1857 aa		11.71	□□□□□ -0.53
TRAF5-204	ENST00000462410	TRIM21	P19474	475 aa	Known RBP	11.71	□□□□□ -0.53
TRAF5-204	ENST00000462410	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.71	□□□□□ -0.53
TRAF5-204	ENST00000462410	PHAX	Q9H814	394 aa	Known RBP	11.71	□□□□□ -0.53
TRAF5-204	ENST00000462410	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.71	□□□□□ -0.53
TRAF5-204	ENST00000462410	RBM19	Q9Y4C8	960 aa	Known RBP	11.71	□□□□□ -0.53
TRAF5-204	ENST00000462410	LMOD1	P29536	600 aa	Predicted RBP	11.71	□□□□□ -0.53
TRAF5-204	ENST00000462410	OLFM4	Q6UX06	510 aa		11.71	□□□□□ -0.53
TRAF5-204	ENST00000462410	TMEM57	Q8N5G2	664 aa		11.71	□□□□□ -0.53
TRAF5-204	ENST00000462410	CRNKL1	Q9BZJ0	848 aa	Known RBP	11.71	□□□□□ -0.53
TRAF5-204	ENST00000462410	MBIP	Q9NS73	344 aa		11.71	□□□□□ -0.53
TRAF5-204	ENST00000462410	GOLGA6L3	A6NEY3	463 aa		11.71	□□□□□ -0.54
TRAF5-204	ENST00000462410	PDE4B	Q07343	736 aa		11.71	□□□□□ -0.54
TRAF5-204	ENST00000462410	CNKSR2	Q8WXI2	1034 aa		11.71	□□□□□ -0.54
TRAF5-204	ENST00000462410	EVI5L	Q96CN4	794 aa		11.71	□□□□□ -0.54
TRAF5-204	ENST00000462410	CEP131	Q9UPN4	1083 aa		11.71	□□□□□ -0.54
TRAF5-204	ENST00000462410	TTLL12	Q14166	644 aa	Predicted RBP	11.7	□□□□□ -0.54
TRAF5-204	ENST00000462410	EYA1	Q99502	592 aa		11.7	□□□□□ -0.54
TRAF5-204	ENST00000462410	PES1	O00541	588 aa	Known RBP	11.7	□□□□□ -0.54
TRAF5-204	ENST00000462410	TNNI2	P48788	182 aa		11.7	□□□□□ -0.54
TRAF5-204	ENST00000462410	FAM196A	Q6ZSG2	479 aa		11.7	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms