RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 USPL1Q5W0Q7 1092 aa21.13■□□□□ 0.97
APP-211ENST00000462267 CHADLQ6NUI6 762 aa21.13■□□□□ 0.97
APP-211ENST00000462267 NFIXQ14938 502 aa21.12■□□□□ 0.97
APP-211ENST00000462267 NFATC2IPQ8NCF5 419 aa21.12■□□□□ 0.97
APP-211ENST00000462267 CTCFP49711 727 aaPredicted RBP21.11■□□□□ 0.97
APP-211ENST00000462267 TIAM2Q8IVF5 1701 aa21.11■□□□□ 0.97
APP-211ENST00000462267 CNTNAP1P78357 1384 aa21.1■□□□□ 0.97
APP-211ENST00000462267 H0YIN7 160 aa21.1■□□□□ 0.97
APP-211ENST00000462267 C2CD5Q86YS7 1000 aa21.1■□□□□ 0.97
APP-211ENST00000462267 AIDAQ96BJ3 306 aa21.1■□□□□ 0.97
APP-211ENST00000462267 SOS1Q07889 1333 aaPredicted RBP21.09■□□□□ 0.97
APP-211ENST00000462267 ADAMTS7Q9UKP4 1686 aa21.09■□□□□ 0.97
APP-211ENST00000462267 SERPINB2P05120 415 aa21.09■□□□□ 0.97
APP-211ENST00000462267 C1orf141Q5JVX7 400 aa21.09■□□□□ 0.97
APP-211ENST00000462267 NARFQ9UHQ1 456 aa21.09■□□□□ 0.97
APP-211ENST00000462267 TJP1Q07157 1748 aa21.08■□□□□ 0.97
APP-211ENST00000462267 ERFEQ4G0M1 354 aa21.08■□□□□ 0.97
APP-211ENST00000462267 DLEC1Q9Y238 1755 aa21.08■□□□□ 0.96
APP-211ENST00000462267 NRXN2Q9P2S2 1712 aa21.07■□□□□ 0.96
APP-211ENST00000462267 CCDC88AQ3V6T2 1871 aa21.07■□□□□ 0.96
APP-211ENST00000462267 DNAJC10Q8IXB1 793 aa21.06■□□□□ 0.96
APP-211ENST00000462267 AFDNP55196 1824 aaKnown RBP21.06■□□□□ 0.96
APP-211ENST00000462267 BCL2L12Q9HB09 334 aa21.04■□□□□ 0.96
APP-211ENST00000462267 PDZRN3Q9UPQ7 1066 aa21.04■□□□□ 0.96
APP-211ENST00000462267 PASKQ96RG2 1323 aa21.04■□□□□ 0.96
APP-211ENST00000462267 COL15A1P39059 1388 aa21.03■□□□□ 0.96
APP-211ENST00000462267 POTEIP0CG38 1075 aa21.03■□□□□ 0.96
APP-211ENST00000462267 POTEJP0CG39 1038 aa21.03■□□□□ 0.96
APP-211ENST00000462267 CYP19A1P11511 503 aaPredicted RBP21.03■□□□□ 0.96
APP-211ENST00000462267 TNNT2P45379 298 aaPredicted RBP21.03■□□□□ 0.96
APP-211ENST00000462267 PCDH10Q9P2E7 1040 aa21.03■□□□□ 0.96
APP-211ENST00000462267 VEGFBP49765 207 aa21.02■□□□□ 0.96
APP-211ENST00000462267 WBP1LQ9NX94 342 aa21.02■□□□□ 0.96
APP-211ENST00000462267 LTBP3Q9NS15 1303 aa21.02■□□□□ 0.95
APP-211ENST00000462267 CARMIL3Q8ND23 1372 aa21.01■□□□□ 0.95
APP-211ENST00000462267 IQCA1LA6NCM1 817 aa21.01■□□□□ 0.95
APP-211ENST00000462267 C21orf2O43822 256 aa21.01■□□□□ 0.95
APP-211ENST00000462267 LBX1P52954 281 aa21.01■□□□□ 0.95
APP-211ENST00000462267 FAM161AQ3B820 660 aa21.01■□□□□ 0.95
APP-211ENST00000462267 LDHDQ86WU2 507 aa21.01■□□□□ 0.95
APP-211ENST00000462267 ZNF622Q969S3 477 aaKnown RBP eCLIP21.01■□□□□ 0.95
APP-211ENST00000462267 ABHD8Q96I13 439 aa21.01■□□□□ 0.95
APP-211ENST00000462267 TMEM88BA6NKF7 163 aa21■□□□□ 0.95
APP-211ENST00000462267 DDNO94850 711 aaPredicted RBP21■□□□□ 0.95
APP-211ENST00000462267 DICER1Q9UPY3 1922 aaKnown RBP21■□□□□ 0.95
APP-211ENST00000462267 PDE6BP35913 854 aa20.99■□□□□ 0.95
APP-211ENST00000462267 AEBP1Q8IUX7 1158 aa20.99■□□□□ 0.95
APP-211ENST00000462267 BRIP1Q9BX63 1249 aa20.99■□□□□ 0.95
APP-211ENST00000462267 TAOK3Q9H2K8 898 aa20.99■□□□□ 0.95
APP-211ENST00000462267 ZBTB1Q9Y2K1 713 aa20.99■□□□□ 0.95
APP-211ENST00000462267 ZNF219Q9P2Y4 722 aaPredicted RBP20.98■□□□□ 0.95
APP-211ENST00000462267 L3MBTL3Q96JM7 780 aaPredicted RBP20.97■□□□□ 0.95
APP-211ENST00000462267 SLC52A2Q9HAB3 445 aa20.97■□□□□ 0.95
APP-211ENST00000462267 FER1L6Q2WGJ9 1857 aa20.96■□□□□ 0.95
APP-211ENST00000462267 ITGBL1O95965 494 aaPredicted RBP20.96■□□□□ 0.95
APP-211ENST00000462267 TAF1DQ9H5J8 278 aaPredicted RBP20.96■□□□□ 0.95
APP-211ENST00000462267 HSPA8P11142 646 aaKnown RBP20.95■□□□□ 0.94
APP-211ENST00000462267 AKAP4Q5JQC9 854 aa20.95■□□□□ 0.94
APP-211ENST00000462267 BICDL1Q6ZP65 573 aa20.95■□□□□ 0.94
APP-211ENST00000462267 VSIG10Q8N0Z9 540 aa20.95■□□□□ 0.94
APP-211ENST00000462267 A0A087WZG4 1122 aa20.94■□□□□ 0.94
APP-211ENST00000462267 SOGA3Q5TF21 947 aa20.94■□□□□ 0.94
APP-211ENST00000462267 SULT6B1Q6IMI4 303 aa20.94■□□□□ 0.94
APP-211ENST00000462267 SCN11AQ9UI33 1791 aa20.94■□□□□ 0.94
APP-211ENST00000462267 MAP2K1Q02750 393 aaPredicted RBP20.93■□□□□ 0.94
APP-211ENST00000462267 MLLT1Q03111 559 aaPredicted RBP20.93■□□□□ 0.94
APP-211ENST00000462267 SLC39A6Q13433 755 aa20.93■□□□□ 0.94
APP-211ENST00000462267 CNKSR1Q969H4 720 aa20.93■□□□□ 0.94
APP-211ENST00000462267 RASSF10A6NK89 507 aa20.92■□□□□ 0.94
APP-211ENST00000462267 CANXP27824 592 aaKnown RBP20.92■□□□□ 0.94
APP-211ENST00000462267 VIRMAQ69YN4 1812 aaKnown RBP20.92■□□□□ 0.94
APP-211ENST00000462267 SCN4AP35499 1836 aa20.91■□□□□ 0.94
APP-211ENST00000462267 RGS19P49795 217 aa20.91■□□□□ 0.94
APP-211ENST00000462267 EIF5P55010 431 aaKnown RBP20.91■□□□□ 0.94
APP-211ENST00000462267 DEFB115Q30KQ5 88 aa20.91■□□□□ 0.94
APP-211ENST00000462267 TBC1D9BQ66K14 1250 aa20.91■□□□□ 0.94
APP-211ENST00000462267 PRR5LQ6MZQ0 368 aa20.91■□□□□ 0.94
APP-211ENST00000462267 LGR6Q9HBX8 967 aa20.91■□□□□ 0.94
APP-211ENST00000462267 ANKRD31Q8N7Z5 1873 aa20.9■□□□□ 0.94
APP-211ENST00000462267 STYK1Q6J9G0 422 aa20.9■□□□□ 0.94
APP-211ENST00000462267 MRC1P22897 1456 aa20.89■□□□□ 0.94
APP-211ENST00000462267 STARD3NLO95772 234 aa20.89■□□□□ 0.93
APP-211ENST00000462267 EAPPQ56P03 285 aaPredicted RBP20.89■□□□□ 0.93
APP-211ENST00000462267 PRPF40BQ6NWY9 871 aaKnown RBP20.89■□□□□ 0.93
APP-211ENST00000462267 WDR33Q9C0J8 1336 aaKnown RBP20.88■□□□□ 0.93
APP-211ENST00000462267 RNMTO43148 476 aaKnown RBP20.88■□□□□ 0.93
APP-211ENST00000462267 HACL1Q9UJ83 578 aa20.88■□□□□ 0.93
APP-211ENST00000462267 CLEC11AQ9Y240 323 aa20.88■□□□□ 0.93
APP-211ENST00000462267 SRGNP10124 158 aa20.87■□□□□ 0.93
APP-211ENST00000462267 PNMA8AQ86V59 439 aaPredicted RBP20.87■□□□□ 0.93
APP-211ENST00000462267 CCDC24Q8N4L8 307 aa20.87■□□□□ 0.93
APP-211ENST00000462267 MASTLQ96GX5 879 aa20.87■□□□□ 0.93
APP-211ENST00000462267 COL11A2P13942 1736 aaPredicted RBP20.87■□□□□ 0.93
APP-211ENST00000462267 CCDC85CA6NKD9 419 aa20.86■□□□□ 0.93
APP-211ENST00000462267 CNTROBQ8N137 903 aa20.86■□□□□ 0.93
APP-211ENST00000462267 CNBD1Q8NA66 436 aa20.86■□□□□ 0.93
APP-211ENST00000462267 NPHP1O15259 732 aa20.85■□□□□ 0.93
APP-211ENST00000462267 EPHX2P34913 555 aa20.85■□□□□ 0.93
APP-211ENST00000462267 IL13P35225 146 aa20.85■□□□□ 0.93
APP-211ENST00000462267 SLX4Q8IY92 1834 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms