RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 LRRC4BQ9NT99 713 aa7.46□□□□□ -1.22
CLK1-207ENST00000461981 KCNG1Q9UIX4 513 aa7.46□□□□□ -1.22
CLK1-207ENST00000461981 NPC1L1Q9UHC9 1359 aa7.46□□□□□ -1.22
CLK1-207ENST00000461981 THSD7BQ9C0I4 1608 aa7.46□□□□□ -1.22
CLK1-207ENST00000461981 TCERG1O14776 1098 aaKnown RBP7.46□□□□□ -1.22
CLK1-207ENST00000461981 ZBTB7AO95365 584 aa7.46□□□□□ -1.22
CLK1-207ENST00000461981 FAM182BQ5T319 152 aa7.46□□□□□ -1.22
CLK1-207ENST00000461981 HOMEZQ8IX15 550 aa7.46□□□□□ -1.22
CLK1-207ENST00000461981 CHRM1P11229 460 aaPredicted RBP7.45□□□□□ -1.22
CLK1-207ENST00000461981 AMOTQ4VCS5 1084 aa7.45□□□□□ -1.22
CLK1-207ENST00000461981 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.45□□□□□ -1.22
CLK1-207ENST00000461981 NME9Q86XW9 330 aa7.45□□□□□ -1.22
CLK1-207ENST00000461981 GOLGA6L3A6NEY3 463 aa7.45□□□□□ -1.22
CLK1-207ENST00000461981 GPR162Q16538 588 aa7.45□□□□□ -1.22
CLK1-207ENST00000461981 JMYQ8N9B5 988 aa7.45□□□□□ -1.22
CLK1-207ENST00000461981 GZF1Q9H116 711 aaPredicted RBP7.45□□□□□ -1.22
CLK1-207ENST00000461981 RIPK4P57078 832 aa7.45□□□□□ -1.22
CLK1-207ENST00000461981 IRX3P78415 501 aaPredicted RBP7.45□□□□□ -1.22
CLK1-207ENST00000461981 SKAP1Q86WV1 359 aa7.45□□□□□ -1.22
CLK1-207ENST00000461981 AEBP1Q8IUX7 1158 aa7.45□□□□□ -1.22
CLK1-207ENST00000461981 NLGN1Q8N2Q7 840 aa7.45□□□□□ -1.22
CLK1-207ENST00000461981 SIPA1L3O60292 1781 aaPredicted RBP7.45□□□□□ -1.22
CLK1-207ENST00000461981 BCORQ6W2J9 1755 aa7.45□□□□□ -1.22
CLK1-207ENST00000461981 SENP3-EIF4A1A0A087X0R7 540 aa7.44□□□□□ -1.22
CLK1-207ENST00000461981 WWC1Q8IX03 1113 aa7.44□□□□□ -1.22
CLK1-207ENST00000461981 RIC1Q4ADV7 1423 aa7.44□□□□□ -1.22
CLK1-207ENST00000461981 AMPHP49418 695 aa7.44□□□□□ -1.22
CLK1-207ENST00000461981 RGS22Q8NE09 1264 aa7.44□□□□□ -1.22
CLK1-207ENST00000461981 RNF216Q9NWF9 866 aaPredicted RBP7.44□□□□□ -1.22
CLK1-207ENST00000461981 ATF5Q9Y2D1 282 aaPredicted RBP7.44□□□□□ -1.22
CLK1-207ENST00000461981 COL23A1Q86Y22 540 aaPredicted RBP7.43□□□□□ -1.22
CLK1-207ENST00000461981 CCDC87Q9NVE4 849 aa7.43□□□□□ -1.22
CLK1-207ENST00000461981 TFCP2L1Q9NZI6 479 aa7.43□□□□□ -1.22
CLK1-207ENST00000461981 IGSF1Q8N6C5 1336 aa7.43□□□□□ -1.22
CLK1-207ENST00000461981 UTP14CQ5TAP6 766 aaKnown RBP7.43□□□□□ -1.22
CLK1-207ENST00000461981 LTBP3Q9NS15 1303 aa7.43□□□□□ -1.22
CLK1-207ENST00000461981 VIRMAQ69YN4 1812 aaKnown RBP7.43□□□□□ -1.22
CLK1-207ENST00000461981 IFNL2Q8IZJ0 200 aa7.43□□□□□ -1.22
CLK1-207ENST00000461981 TRIM44Q96DX7 344 aaPredicted RBP7.43□□□□□ -1.22
CLK1-207ENST00000461981 MAP7D2Q96T17 732 aa7.43□□□□□ -1.22
CLK1-207ENST00000461981 TIAM2Q8IVF5 1701 aa7.42□□□□□ -1.22
CLK1-207ENST00000461981 ZSCAN20P17040 1043 aaPredicted RBP7.42□□□□□ -1.22
CLK1-207ENST00000461981 CCDC184Q52MB2 194 aa7.42□□□□□ -1.22
CLK1-207ENST00000461981 FYB1O15117 783 aa7.42□□□□□ -1.22
CLK1-207ENST00000461981 AK7Q96M32 723 aa7.42□□□□□ -1.22
CLK1-207ENST00000461981 SBF1O95248 1867 aa7.42□□□□□ -1.22
CLK1-207ENST00000461981 RPS6KA4O75676 772 aa7.41□□□□□ -1.22
CLK1-207ENST00000461981 PRIM1P49642 420 aaKnown RBP7.41□□□□□ -1.22
CLK1-207ENST00000461981 CGNQ9P2M7 1197 aaKnown RBP7.41□□□□□ -1.22
CLK1-207ENST00000461981 TMC1Q8TDI8 760 aa7.41□□□□□ -1.22
CLK1-207ENST00000461981 DCAF5Q96JK2 942 aa7.41□□□□□ -1.22
CLK1-207ENST00000461981 SCN4AP35499 1836 aa7.41□□□□□ -1.22
CLK1-207ENST00000461981 TOMM70O94826 608 aa7.41□□□□□ -1.22
CLK1-207ENST00000461981 GRIPAP1Q4V328 841 aa7.41□□□□□ -1.22
CLK1-207ENST00000461981 MYH16Q9H6N6 1097 aa7.4□□□□□ -1.22
CLK1-207ENST00000461981 BCCIPQ9P287 314 aaKnown RBP eCLIP7.4□□□□□ -1.22
CLK1-207ENST00000461981 KDM2BQ8NHM5 1336 aa7.4□□□□□ -1.22
CLK1-207ENST00000461981 A0A087WZG4 1122 aa7.4□□□□□ -1.23
CLK1-207ENST00000461981 PTF1AQ7RTS3 328 aa7.4□□□□□ -1.23
CLK1-207ENST00000461981 CHMP4CQ96CF2 233 aa7.4□□□□□ -1.23
CLK1-207ENST00000461981 SLC12A5Q9H2X9 1139 aa7.4□□□□□ -1.23
CLK1-207ENST00000461981 PLEKHO1Q53GL0 409 aaPredicted RBP7.39□□□□□ -1.23
CLK1-207ENST00000461981 ZBTB9Q96C00 473 aa7.39□□□□□ -1.23
CLK1-207ENST00000461981 ZBED9Q6R2W3 1325 aa7.39□□□□□ -1.23
CLK1-207ENST00000461981 IBTKQ9P2D0 1353 aaPredicted RBP7.39□□□□□ -1.23
CLK1-207ENST00000461981 LAMB4A4D0S4 1761 aa7.39□□□□□ -1.23
CLK1-207ENST00000461981 KIF3CO14782 793 aa7.39□□□□□ -1.23
CLK1-207ENST00000461981 MYCNP04198 464 aaPredicted RBP7.39□□□□□ -1.23
CLK1-207ENST00000461981 PHKG2P15735 406 aa7.39□□□□□ -1.23
CLK1-207ENST00000461981 YBX3P16989 372 aaKnown RBP eCLIP7.39□□□□□ -1.23
CLK1-207ENST00000461981 NBPF6Q5VWK0 638 aa7.39□□□□□ -1.23
CLK1-207ENST00000461981 NBPF4Q96M43 638 aa7.39□□□□□ -1.23
CLK1-207ENST00000461981 SLKQ9H2G2 1235 aaPredicted RBP7.39□□□□□ -1.23
CLK1-207ENST00000461981 R3HCC1Q9Y3T6 440 aaKnown RBP7.39□□□□□ -1.23
CLK1-207ENST00000461981 LOC102724428A0A0B4J2F2 783 aa7.38□□□□□ -1.23
CLK1-207ENST00000461981 SIK1P57059 783 aa7.38□□□□□ -1.23
CLK1-207ENST00000461981 SOGA3Q5TF21 947 aa7.38□□□□□ -1.23
CLK1-207ENST00000461981 GPBP1L1Q9HC44 474 aaPredicted RBP7.38□□□□□ -1.23
CLK1-207ENST00000461981 FER1L6Q2WGJ9 1857 aa7.38□□□□□ -1.23
CLK1-207ENST00000461981 AFDNP55196 1824 aaKnown RBP7.38□□□□□ -1.23
CLK1-207ENST00000461981 KCPQ6ZWJ8 1503 aa7.38□□□□□ -1.23
CLK1-207ENST00000461981 ADAMTSL1Q8N6G6 1762 aa7.38□□□□□ -1.23
CLK1-207ENST00000461981 KIF20AO95235 890 aa7.38□□□□□ -1.23
CLK1-207ENST00000461981 MS4A1P11836 297 aa7.38□□□□□ -1.23
CLK1-207ENST00000461981 ACSBG1Q96GR2 724 aa7.38□□□□□ -1.23
CLK1-207ENST00000461981 TMOD3Q9NYL9 352 aa7.38□□□□□ -1.23
CLK1-207ENST00000461981 N4BP2Q86UW6 1770 aaPredicted RBP7.38□□□□□ -1.23
CLK1-207ENST00000461981 CYP27B1O15528 508 aa7.37□□□□□ -1.23
CLK1-207ENST00000461981 TEX13AQ9BXU3 409 aaPredicted RBP7.37□□□□□ -1.23
CLK1-207ENST00000461981 PATL2C9JE40 543 aaKnown RBP7.37□□□□□ -1.23
CLK1-207ENST00000461981 APPP05067 770 aa7.37□□□□□ -1.23
CLK1-207ENST00000461981 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.37□□□□□ -1.23
CLK1-207ENST00000461981 NGEFQ8N5V2 710 aa7.37□□□□□ -1.23
CLK1-207ENST00000461981 UQCRHLA0A096LP55 91 aa7.36□□□□□ -1.23
CLK1-207ENST00000461981 IGSF3O75054 1194 aa7.36□□□□□ -1.23
CLK1-207ENST00000461981 UQCRHP07919 91 aa7.36□□□□□ -1.23
CLK1-207ENST00000461981 CBX1P83916 185 aa7.36□□□□□ -1.23
CLK1-207ENST00000461981 EXOC6Q8TAG9 804 aa7.36□□□□□ -1.23
CLK1-207ENST00000461981 HDAC5Q9UQL6 1122 aa7.36□□□□□ -1.23
CLK1-207ENST00000461981 RTCBQ9Y3I0 505 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms