RNA–Protein interactions for RNA: ENST00000461720.5

COL11A1-206, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-206ENST00000461720 ZBTB1Q9Y2K1 713 aa16.79■□□□□ 0.28
COL11A1-206ENST00000461720 FCHSD2O94868 740 aa16.78■□□□□ 0.28
COL11A1-206ENST00000461720 CANXP27824 592 aaKnown RBP16.78■□□□□ 0.28
COL11A1-206ENST00000461720 NPM2Q86SE8 214 aaKnown RBP16.78■□□□□ 0.28
COL11A1-206ENST00000461720 RTF1Q92541 710 aaKnown RBP16.78■□□□□ 0.28
COL11A1-206ENST00000461720 PHACTR3Q96KR7 559 aa16.78■□□□□ 0.28
COL11A1-206ENST00000461720 N4BP2Q86UW6 1770 aaPredicted RBP16.78■□□□□ 0.28
COL11A1-206ENST00000461720 A0A087WZG4 1122 aa16.77■□□□□ 0.28
COL11A1-206ENST00000461720 NEFMP07197 916 aa16.77■□□□□ 0.28
COL11A1-206ENST00000461720 TM4SF1P30408 202 aa16.77■□□□□ 0.28
COL11A1-206ENST00000461720 DDR1Q08345 913 aa16.77■□□□□ 0.28
COL11A1-206ENST00000461720 ZNF496Q96IT1 587 aaPredicted RBP16.77■□□□□ 0.28
COL11A1-206ENST00000461720 FMNL2Q96PY5 1086 aa16.77■□□□□ 0.28
COL11A1-206ENST00000461720 PIM2Q9P1W9 311 aa16.77■□□□□ 0.28
COL11A1-206ENST00000461720 SENP3-EIF4A1A0A087X0R7 540 aa16.76■□□□□ 0.27
COL11A1-206ENST00000461720 BTBD11A6QL63 1104 aa16.76■□□□□ 0.27
COL11A1-206ENST00000461720 POLRMTO00411 1230 aaKnown RBP16.76■□□□□ 0.27
COL11A1-206ENST00000461720 ARHGAP27Q6ZUM4 889 aa16.76■□□□□ 0.27
COL11A1-206ENST00000461720 GOLGB1Q14789 3259 aaKnown RBP16.76■□□□□ 0.27
COL11A1-206ENST00000461720 UBR2Q8IWV8 1755 aa16.76■□□□□ 0.27
COL11A1-206ENST00000461720 CEMIPQ8WUJ3 1361 aa16.76■□□□□ 0.27
COL11A1-206ENST00000461720 HEG1Q9ULI3 1381 aa16.76■□□□□ 0.27
COL11A1-206ENST00000461720 POTEDQ86YR6 584 aa16.75■□□□□ 0.27
COL11A1-206ENST00000461720 ZNF526Q8TF50 670 aaPredicted RBP16.75■□□□□ 0.27
COL11A1-206ENST00000461720 ADCY9O60503 1353 aa16.75■□□□□ 0.27
COL11A1-206ENST00000461720 KIAA1551Q9HCM1 1747 aa16.74■□□□□ 0.27
COL11A1-206ENST00000461720 DALRD3Q5D0E6 543 aaKnown RBP16.74■□□□□ 0.27
COL11A1-206ENST00000461720 ZNF330Q9Y3S2 320 aaPredicted RBP16.74■□□□□ 0.27
COL11A1-206ENST00000461720 EIF5P55010 431 aaKnown RBP16.73■□□□□ 0.27
COL11A1-206ENST00000461720 NFIXQ14938 502 aa16.73■□□□□ 0.27
COL11A1-206ENST00000461720 SIPA1L3O60292 1781 aaPredicted RBP16.72■□□□□ 0.27
COL11A1-206ENST00000461720 HTATSF1O43719 755 aaKnown RBP16.72■□□□□ 0.27
COL11A1-206ENST00000461720 KCNA3P22001 575 aa16.72■□□□□ 0.27
COL11A1-206ENST00000461720 SERPINB2P05120 415 aa16.71■□□□□ 0.27
COL11A1-206ENST00000461720 CHRNA5P30532 468 aa16.71■□□□□ 0.27
COL11A1-206ENST00000461720 IL6STP40189 918 aaPredicted RBP16.71■□□□□ 0.27
COL11A1-206ENST00000461720 MCM10Q7L590 875 aa16.71■□□□□ 0.27
COL11A1-206ENST00000461720 BICDL1Q6ZP65 573 aa16.7■□□□□ 0.26
COL11A1-206ENST00000461720 PNNQ9H307 717 aaKnown RBP16.7■□□□□ 0.26
COL11A1-206ENST00000461720 BCL2L12Q9HB09 334 aa16.7■□□□□ 0.26
COL11A1-206ENST00000461720 BRCA1P38398 1863 aaKnown RBP16.69■□□□□ 0.26
COL11A1-206ENST00000461720 KCNQ3O43525 872 aa16.68■□□□□ 0.26
COL11A1-206ENST00000461720 A1BGP04217 495 aa16.68■□□□□ 0.26
COL11A1-206ENST00000461720 SNRPA1P09661 255 aaKnown RBP16.68■□□□□ 0.26
COL11A1-206ENST00000461720 TBC1D2BQ9UPU7 963 aa16.68■□□□□ 0.26
COL11A1-206ENST00000461720 ARFGEF1Q9Y6D6 1849 aa16.68■□□□□ 0.26
COL11A1-206ENST00000461720 H0YIN7 160 aa16.67■□□□□ 0.26
COL11A1-206ENST00000461720 NPHP1O15259 732 aa16.67■□□□□ 0.26
COL11A1-206ENST00000461720 TAF7Q15545 349 aaPredicted RBP16.67■□□□□ 0.26
COL11A1-206ENST00000461720 AFDNP55196 1824 aaKnown RBP16.66■□□□□ 0.26
COL11A1-206ENST00000461720 DCTN1Q14203 1278 aa16.66■□□□□ 0.26
COL11A1-206ENST00000461720 C9orf131Q5VYM1 1079 aa16.66■□□□□ 0.26
COL11A1-206ENST00000461720 TBC1D9BQ66K14 1250 aa16.66■□□□□ 0.26
COL11A1-206ENST00000461720 USP16Q9Y5T5 823 aa16.66■□□□□ 0.26
COL11A1-206ENST00000461720 CARMIL3Q8ND23 1372 aa16.65■□□□□ 0.26
COL11A1-206ENST00000461720 DZIP3Q86Y13 1208 aaKnown RBP16.65■□□□□ 0.26
COL11A1-206ENST00000461720 C2CD5Q86YS7 1000 aa16.65■□□□□ 0.26
COL11A1-206ENST00000461720 TTLL6Q8N841 843 aa16.65■□□□□ 0.26
COL11A1-206ENST00000461720 PNISRQ8TF01 805 aaKnown RBP16.65■□□□□ 0.26
COL11A1-206ENST00000461720 SETDB2Q96T68 719 aa16.65■□□□□ 0.26
COL11A1-206ENST00000461720 PDZRN3Q9UPQ7 1066 aa16.65■□□□□ 0.26
COL11A1-206ENST00000461720 MAPK8IP3Q9UPT6 1336 aa16.65■□□□□ 0.26
COL11A1-206ENST00000461720 NRXN2Q9P2S2 1712 aa16.65■□□□□ 0.26
COL11A1-206ENST00000461720 PDE6BP35913 854 aa16.64■□□□□ 0.25
COL11A1-206ENST00000461720 RALBP1Q15311 655 aa16.64■□□□□ 0.25
COL11A1-206ENST00000461720 BRIP1Q9BX63 1249 aa16.63■□□□□ 0.25
COL11A1-206ENST00000461720 RNF181Q9P0P0 153 aa16.63■□□□□ 0.25
COL11A1-206ENST00000461720 ZNF652Q9Y2D9 606 aa16.63■□□□□ 0.25
COL11A1-206ENST00000461720 SCN7AQ01118 1682 aa16.62■□□□□ 0.25
COL11A1-206ENST00000461720 CAMTA2O94983 1202 aa16.62■□□□□ 0.25
COL11A1-206ENST00000461720 NFE2L2Q16236 605 aa16.62■□□□□ 0.25
COL11A1-206ENST00000461720 CNBD1Q8NA66 436 aa16.62■□□□□ 0.25
COL11A1-206ENST00000461720 PRAMEF22A3QJZ6 481 aa16.61■□□□□ 0.25
COL11A1-206ENST00000461720 KIF3CO14782 793 aa16.61■□□□□ 0.25
COL11A1-206ENST00000461720 PIP4K2AP48426 406 aaPredicted RBP16.61■□□□□ 0.25
COL11A1-206ENST00000461720 ST5P78524 1137 aa16.61■□□□□ 0.25
COL11A1-206ENST00000461720 PRR5LQ6MZQ0 368 aa16.61■□□□□ 0.25
COL11A1-206ENST00000461720 CLEC4GQ6UXB4 293 aa16.61■□□□□ 0.25
COL11A1-206ENST00000461720 ZNF622Q969S3 477 aaKnown RBP eCLIP16.61■□□□□ 0.25
COL11A1-206ENST00000461720 PLEKHF1Q96S99 279 aa16.61■□□□□ 0.25
COL11A1-206ENST00000461720 KDM2BQ8NHM5 1336 aa16.61■□□□□ 0.25
COL11A1-206ENST00000461720 MIS18AQ9NYP9 233 aa16.6■□□□□ 0.25
COL11A1-206ENST00000461720 TOMM70O94826 608 aa16.59■□□□□ 0.25
COL11A1-206ENST00000461720 HSPA6P17066 643 aa16.59■□□□□ 0.25
COL11A1-206ENST00000461720 NBPF5PQ86XG9 351 aaPredicted RBP16.59■□□□□ 0.25
COL11A1-206ENST00000461720 C16orf71Q8IYS4 520 aaPredicted RBP16.59■□□□□ 0.25
COL11A1-206ENST00000461720 DLEC1Q9Y238 1755 aa16.59■□□□□ 0.25
COL11A1-206ENST00000461720 RGL2O15211 777 aa16.58■□□□□ 0.24
COL11A1-206ENST00000461720 LMNB1P20700 586 aa16.58■□□□□ 0.24
COL11A1-206ENST00000461720 DDX10Q13206 875 aaKnown RBP16.58■□□□□ 0.24
COL11A1-206ENST00000461720 CCDC24Q8N4L8 307 aa16.58■□□□□ 0.24
COL11A1-206ENST00000461720 RASSF7Q02833 373 aa16.57■□□□□ 0.24
COL11A1-206ENST00000461720 CNKSR1Q969H4 720 aa16.57■□□□□ 0.24
COL11A1-206ENST00000461720 NMRK2Q9NPI5 230 aa16.57■□□□□ 0.24
COL11A1-206ENST00000461720 DLG5Q8TDM6 1919 aa16.57■□□□□ 0.24
COL11A1-206ENST00000461720 BCORQ6W2J9 1755 aa16.56■□□□□ 0.24
COL11A1-206ENST00000461720 ZC3H4Q9UPT8 1303 aaKnown RBP16.56■□□□□ 0.24
COL11A1-206ENST00000461720 NBPF26B4DH59 902 aa16.56■□□□□ 0.24
COL11A1-206ENST00000461720 NBPF10Q6P3W6 841 aaKnown RBP16.56■□□□□ 0.24
COL11A1-206ENST00000461720 TPTE2Q6XPS3 522 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms