RNA–Protein interactions for RNA: ENST00000460625.1

UPK1B-202, Transcript of uroplakin 1B, humanhuman

TSL 1 (best) BASIC

Gene UPK1B, Length 1,937 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1B-202ENST00000460625 PDIA6Q15084 440 aa13.83□□□□□ -0.2
UPK1B-202ENST00000460625 SYTL4Q96C24 671 aaPredicted RBP13.83□□□□□ -0.2
UPK1B-202ENST00000460625 ATG3Q9NT62 314 aa13.83□□□□□ -0.2
UPK1B-202ENST00000460625 PCDHB15Q9Y5E8 787 aa13.83□□□□□ -0.2
UPK1B-202ENST00000460625 A0A0G2JS52 829 aa13.82□□□□□ -0.2
UPK1B-202ENST00000460625 MYT1Q01538 1121 aa13.82□□□□□ -0.2
UPK1B-202ENST00000460625 FKBP5Q13451 457 aaPredicted RBP13.82□□□□□ -0.2
UPK1B-202ENST00000460625 ACSBG1Q96GR2 724 aa13.82□□□□□ -0.2
UPK1B-202ENST00000460625 DBF4Q9UBU7 674 aaPredicted RBP13.82□□□□□ -0.2
UPK1B-202ENST00000460625 ZBTB7BO15156 539 aaPredicted RBP13.82□□□□□ -0.2
UPK1B-202ENST00000460625 TRPC5Q9UL62 973 aaPredicted RBP13.82□□□□□ -0.2
UPK1B-202ENST00000460625 LAMB4A4D0S4 1761 aa13.82□□□□□ -0.2
UPK1B-202ENST00000460625 PIP4K2AP48426 406 aaPredicted RBP13.81□□□□□ -0.2
UPK1B-202ENST00000460625 INTS3Q68E01 1043 aaKnown RBP13.81□□□□□ -0.2
UPK1B-202ENST00000460625 ZBTB40Q9NUA8 1239 aa13.81□□□□□ -0.2
UPK1B-202ENST00000460625 SLC4A10Q6U841 1118 aa13.8□□□□□ -0.2
UPK1B-202ENST00000460625 KDM2BQ8NHM5 1336 aa13.8□□□□□ -0.2
UPK1B-202ENST00000460625 IGHDP01880 384 aa13.8□□□□□ -0.2
UPK1B-202ENST00000460625 CHMP4AQ9BY43 222 aa13.8□□□□□ -0.2
UPK1B-202ENST00000460625 QTRT2Q9H974 415 aaKnown RBP13.8□□□□□ -0.2
UPK1B-202ENST00000460625 DDX21Q9NR30 783 aaKnown RBP eCLIP13.8□□□□□ -0.2
UPK1B-202ENST00000460625 KCNQ2O43526 872 aa13.79□□□□□ -0.2
UPK1B-202ENST00000460625 MYL6BP14649 208 aa13.79□□□□□ -0.2
UPK1B-202ENST00000460625 AAMPQ13685 434 aa13.79□□□□□ -0.2
UPK1B-202ENST00000460625 FAM182BQ5T319 152 aa13.79□□□□□ -0.2
UPK1B-202ENST00000460625 LRP10Q7Z4F1 713 aa13.79□□□□□ -0.2
UPK1B-202ENST00000460625 SLC4A9Q96Q91 983 aa13.78□□□□□ -0.2
UPK1B-202ENST00000460625 C1orf115Q9H7X2 142 aa13.78□□□□□ -0.2
UPK1B-202ENST00000460625 ADCY9O60503 1353 aa13.78□□□□□ -0.2
UPK1B-202ENST00000460625 EP400Q96L91 3159 aa13.78□□□□□ -0.2
UPK1B-202ENST00000460625 ONECUT3O60422 494 aaPredicted RBP13.78□□□□□ -0.2
UPK1B-202ENST00000460625 RBM42Q9BTD8 480 aaKnown RBP13.78□□□□□ -0.2
UPK1B-202ENST00000460625 HYPKQ9NX55 129 aa13.78□□□□□ -0.2
UPK1B-202ENST00000460625 PI4KAP2A4QPH2 592 aa13.77□□□□□ -0.21
UPK1B-202ENST00000460625 NBPF26B4DH59 902 aa13.77□□□□□ -0.21
UPK1B-202ENST00000460625 NBPF14Q5TI25 921 aa13.77□□□□□ -0.21
UPK1B-202ENST00000460625 NBPF10Q6P3W6 841 aaKnown RBP13.77□□□□□ -0.21
UPK1B-202ENST00000460625 PTF1AQ7RTS3 328 aa13.77□□□□□ -0.21
UPK1B-202ENST00000460625 NBPF15Q8N660 670 aa13.77□□□□□ -0.21
UPK1B-202ENST00000460625 PI4KAP1Q8N8J0 262 aa13.77□□□□□ -0.21
UPK1B-202ENST00000460625 N4BP2Q86UW6 1770 aaPredicted RBP13.77□□□□□ -0.21
UPK1B-202ENST00000460625 A1BGP04217 495 aa13.76□□□□□ -0.21
UPK1B-202ENST00000460625 AIMP1Q12904 312 aaKnown RBP13.76□□□□□ -0.21
UPK1B-202ENST00000460625 DNAJC10Q8IXB1 793 aa13.76□□□□□ -0.21
UPK1B-202ENST00000460625 SEPT12Q8IYM1 358 aa13.76□□□□□ -0.21
UPK1B-202ENST00000460625 CCT4P50991 539 aaKnown RBP13.76□□□□□ -0.21
UPK1B-202ENST00000460625 SKAP1Q86WV1 359 aa13.76□□□□□ -0.21
UPK1B-202ENST00000460625 MEIS3Q99687 375 aa13.76□□□□□ -0.21
UPK1B-202ENST00000460625 PXDNLA1KZ92 1463 aa13.75□□□□□ -0.21
UPK1B-202ENST00000460625 COPS6Q7L5N1 327 aa13.75□□□□□ -0.21
UPK1B-202ENST00000460625 XAGE3Q8WTP9 111 aa13.75□□□□□ -0.21
UPK1B-202ENST00000460625 CENPQQ7L2Z9 268 aaPredicted RBP13.74□□□□□ -0.21
UPK1B-202ENST00000460625 VSIG10Q8N0Z9 540 aa13.74□□□□□ -0.21
UPK1B-202ENST00000460625 DNAAF4Q8WXU2 420 aa13.74□□□□□ -0.21
UPK1B-202ENST00000460625 MAP3K2Q9Y2U5 619 aa13.74□□□□□ -0.21
UPK1B-202ENST00000460625 TJP1Q07157 1748 aa13.74□□□□□ -0.21
UPK1B-202ENST00000460625 KSR2Q6VAB6 950 aa13.74□□□□□ -0.21
UPK1B-202ENST00000460625 BEND3Q5T5X7 828 aa13.73□□□□□ -0.21
UPK1B-202ENST00000460625 FBXO41Q8TF61 875 aa13.73□□□□□ -0.21
UPK1B-202ENST00000460625 BRWD3Q6RI45 1802 aa13.73□□□□□ -0.21
UPK1B-202ENST00000460625 ERBB4Q15303 1308 aa13.72□□□□□ -0.21
UPK1B-202ENST00000460625 SIRT2Q8IXJ6 389 aa13.72□□□□□ -0.21
UPK1B-202ENST00000460625 CHMP4BQ9H444 224 aaKnown RBP13.72□□□□□ -0.21
UPK1B-202ENST00000460625 SBF2Q86WG5 1849 aa13.72□□□□□ -0.21
UPK1B-202ENST00000460625 NHSQ6T4R5 1651 aa13.71□□□□□ -0.21
UPK1B-202ENST00000460625 ATP10DQ9P241 1426 aa13.71□□□□□ -0.21
UPK1B-202ENST00000460625 CYP19A1P11511 503 aaPredicted RBP13.71□□□□□ -0.21
UPK1B-202ENST00000460625 HDAC1Q13547 482 aaPredicted RBP13.71□□□□□ -0.21
UPK1B-202ENST00000460625 TTLL7Q6ZT98 887 aa13.71□□□□□ -0.21
UPK1B-202ENST00000460625 TEX13AQ9BXU3 409 aaPredicted RBP13.71□□□□□ -0.21
UPK1B-202ENST00000460625 SRCIN1Q9C0H9 1055 aa13.71□□□□□ -0.21
UPK1B-202ENST00000460625 USP44Q9H0E7 712 aa13.71□□□□□ -0.21
UPK1B-202ENST00000460625 PALLDQ8WX93 1383 aa13.71□□□□□ -0.21
UPK1B-202ENST00000460625 BTAF1O14981 1849 aa13.71□□□□□ -0.22
UPK1B-202ENST00000460625 LOC102724428A0A0B4J2F2 783 aa13.7□□□□□ -0.22
UPK1B-202ENST00000460625 DDX58O95786 925 aaKnown RBP13.7□□□□□ -0.22
UPK1B-202ENST00000460625 SIK1P57059 783 aa13.7□□□□□ -0.22
UPK1B-202ENST00000460625 ZNF772Q68DY9 489 aaPredicted RBP13.7□□□□□ -0.22
UPK1B-202ENST00000460625 RIC3Q7Z5B4 369 aa13.7□□□□□ -0.22
UPK1B-202ENST00000460625 RWDD1Q9H446 243 aaPredicted RBP13.7□□□□□ -0.22
UPK1B-202ENST00000460625 ARFGEF2Q9Y6D5 1785 aa13.7□□□□□ -0.22
UPK1B-202ENST00000460625 STARD3NLO95772 234 aa13.7□□□□□ -0.22
UPK1B-202ENST00000460625 ITPK1Q13572 414 aa13.7□□□□□ -0.22
UPK1B-202ENST00000460625 CWF19L2Q2TBE0 894 aaKnown RBP13.7□□□□□ -0.22
UPK1B-202ENST00000460625 ANKRD13DQ6ZTN6 518 aa13.7□□□□□ -0.22
UPK1B-202ENST00000460625 ATP6V1AP38606 617 aa13.69□□□□□ -0.22
UPK1B-202ENST00000460625 IGKV5-2P06315 115 aa13.68□□□□□ -0.22
UPK1B-202ENST00000460625 RBM6P78332 1123 aaKnown RBP13.68□□□□□ -0.22
UPK1B-202ENST00000460625 RGS17Q9UGC6 210 aaPredicted RBP13.68□□□□□ -0.22
UPK1B-202ENST00000460625 ZBTB1Q9Y2K1 713 aa13.68□□□□□ -0.22
UPK1B-202ENST00000460625 NUP188Q5SRE5 1749 aa13.68□□□□□ -0.22
UPK1B-202ENST00000460625 NBPF7P0C2Y1 421 aaPredicted RBP13.68□□□□□ -0.22
UPK1B-202ENST00000460625 CEP85Q6P2H3 762 aa13.68□□□□□ -0.22
UPK1B-202ENST00000460625 MYD88Q99836 296 aa13.68□□□□□ -0.22
UPK1B-202ENST00000460625 METTL22Q9BUU2 404 aaPredicted RBP13.68□□□□□ -0.22
UPK1B-202ENST00000460625 ZNF330Q9Y3S2 320 aaPredicted RBP13.68□□□□□ -0.22
UPK1B-202ENST00000460625 KCNQ4P56696 695 aa13.67□□□□□ -0.22
UPK1B-202ENST00000460625 LINS1Q8NG48 757 aa13.67□□□□□ -0.22
UPK1B-202ENST00000460625 PLBD2Q8NHP8 589 aa13.67□□□□□ -0.22
UPK1B-202ENST00000460625 SMARCC1Q92922 1105 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms