RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 MCM4P33991 863 aa19.71■□□□□ 0.75
CMTM3-203ENST00000460097 PROM2Q8N271 834 aa19.71■□□□□ 0.75
CMTM3-203ENST00000460097 ATG3Q9NT62 314 aa19.71■□□□□ 0.75
CMTM3-203ENST00000460097 LMOD3Q0VAK6 560 aa19.7■□□□□ 0.74
CMTM3-203ENST00000460097 TXNRD1Q16881 649 aa19.7■□□□□ 0.74
CMTM3-203ENST00000460097 GLIPR1L2Q4G1C9 344 aa19.7■□□□□ 0.74
CMTM3-203ENST00000460097 RWDD1Q9H446 243 aaPredicted RBP19.7■□□□□ 0.74
CMTM3-203ENST00000460097 CHMP5Q9NZZ3 219 aa19.7■□□□□ 0.74
CMTM3-203ENST00000460097 ADAMTS7Q9UKP4 1686 aa19.69■□□□□ 0.74
CMTM3-203ENST00000460097 PALLDQ8WX93 1383 aa19.69■□□□□ 0.74
CMTM3-203ENST00000460097 XRCC6P12956 609 aaKnown RBP eCLIP19.69■□□□□ 0.74
CMTM3-203ENST00000460097 MRE11P49959 708 aa19.69■□□□□ 0.74
CMTM3-203ENST00000460097 RARSP54136 660 aaKnown RBP19.69■□□□□ 0.74
CMTM3-203ENST00000460097 CT47B1P0C2W7 299 aaPredicted RBP19.67■□□□□ 0.74
CMTM3-203ENST00000460097 CANXP27824 592 aaKnown RBP19.67■□□□□ 0.74
CMTM3-203ENST00000460097 SLC27A3Q5K4L6 730 aa19.67■□□□□ 0.74
CMTM3-203ENST00000460097 COG6Q9Y2V7 657 aa19.67■□□□□ 0.74
CMTM3-203ENST00000460097 DLG5Q8TDM6 1919 aa19.67■□□□□ 0.74
CMTM3-203ENST00000460097 MRC1P22897 1456 aa19.67■□□□□ 0.74
CMTM3-203ENST00000460097 SLKQ9H2G2 1235 aaPredicted RBP19.67■□□□□ 0.74
CMTM3-203ENST00000460097 TAF7Q15545 349 aaPredicted RBP19.66■□□□□ 0.74
CMTM3-203ENST00000460097 THUMPD2Q9BTF0 503 aaKnown RBP19.66■□□□□ 0.74
CMTM3-203ENST00000460097 CCNL1Q9UK58 526 aaPredicted RBP19.66■□□□□ 0.74
CMTM3-203ENST00000460097 TRIM35Q9UPQ4 493 aa19.66■□□□□ 0.74
CMTM3-203ENST00000460097 RGPD3A6NKT7 1758 aaPredicted RBP19.65■□□□□ 0.74
CMTM3-203ENST00000460097 RGPD4Q7Z3J3 1758 aa19.65■□□□□ 0.74
CMTM3-203ENST00000460097 BTBD11A6QL63 1104 aa19.65■□□□□ 0.74
CMTM3-203ENST00000460097 DDX11L8A8MPP1 907 aa19.65■□□□□ 0.74
CMTM3-203ENST00000460097 SLC39A6Q13433 755 aa19.65■□□□□ 0.74
CMTM3-203ENST00000460097 PANK1Q8TE04 598 aa19.65■□□□□ 0.74
CMTM3-203ENST00000460097 LOC102724428A0A0B4J2F2 783 aa19.65■□□□□ 0.74
CMTM3-203ENST00000460097 SIK1P57059 783 aa19.65■□□□□ 0.74
CMTM3-203ENST00000460097 RBM42Q9BTD8 480 aaKnown RBP19.65■□□□□ 0.74
CMTM3-203ENST00000460097 LRRC4BQ9NT99 713 aa19.65■□□□□ 0.74
CMTM3-203ENST00000460097 PDZRN3Q9UPQ7 1066 aa19.65■□□□□ 0.74
CMTM3-203ENST00000460097 KCNQ4P56696 695 aa19.64■□□□□ 0.73
CMTM3-203ENST00000460097 PTCD1O75127 700 aaKnown RBP19.63■□□□□ 0.73
CMTM3-203ENST00000460097 PTMSP20962 102 aa19.63■□□□□ 0.73
CMTM3-203ENST00000460097 TTC5Q8N0Z6 440 aa19.63■□□□□ 0.73
CMTM3-203ENST00000460097 PCDHB15Q9Y5E8 787 aa19.63■□□□□ 0.73
CMTM3-203ENST00000460097 RRP9O43818 475 aaKnown RBP19.62■□□□□ 0.73
CMTM3-203ENST00000460097 HMGB2P26583 209 aaKnown RBP19.62■□□□□ 0.73
CMTM3-203ENST00000460097 NBPF14Q5TI25 921 aa19.62■□□□□ 0.73
CMTM3-203ENST00000460097 ZNF790Q6PG37 636 aa19.62■□□□□ 0.73
CMTM3-203ENST00000460097 ATP6V1AP38606 617 aa19.62■□□□□ 0.73
CMTM3-203ENST00000460097 LY75O60449 1722 aa19.61■□□□□ 0.73
CMTM3-203ENST00000460097 MIS18AQ9NYP9 233 aa19.6■□□□□ 0.73
CMTM3-203ENST00000460097 CIZ1Q9ULV3 898 aaPredicted RBP19.6■□□□□ 0.73
CMTM3-203ENST00000460097 RREB1Q92766 1687 aa19.6■□□□□ 0.73
CMTM3-203ENST00000460097 TRAK2O60296 914 aa19.6■□□□□ 0.73
CMTM3-203ENST00000460097 HDAC1Q13547 482 aaPredicted RBP19.6■□□□□ 0.73
CMTM3-203ENST00000460097 SIPA1L3O60292 1781 aaPredicted RBP19.59■□□□□ 0.73
CMTM3-203ENST00000460097 SNX21Q969T3 373 aa19.59■□□□□ 0.73
CMTM3-203ENST00000460097 SLC4A9Q96Q91 983 aa19.59■□□□□ 0.73
CMTM3-203ENST00000460097 KCNQ3O43525 872 aa19.58■□□□□ 0.73
CMTM3-203ENST00000460097 DDIT3P35638 169 aa19.58■□□□□ 0.73
CMTM3-203ENST00000460097 CALD1Q05682 793 aaKnown RBP19.58■□□□□ 0.73
CMTM3-203ENST00000460097 MVPQ14764 893 aaKnown RBP19.58■□□□□ 0.73
CMTM3-203ENST00000460097 C22orf23Q9BZE7 217 aa19.58■□□□□ 0.73
CMTM3-203ENST00000460097 FMNL2Q96PY5 1086 aa19.57■□□□□ 0.72
CMTM3-203ENST00000460097 MYH16Q9H6N6 1097 aa19.57■□□□□ 0.72
CMTM3-203ENST00000460097 BABAM1Q9NWV8 329 aa19.57■□□□□ 0.72
CMTM3-203ENST00000460097 ITPK1Q13572 414 aa19.57■□□□□ 0.72
CMTM3-203ENST00000460097 VSIG10Q8N0Z9 540 aa19.57■□□□□ 0.72
CMTM3-203ENST00000460097 ZNF496Q96IT1 587 aaPredicted RBP19.57■□□□□ 0.72
CMTM3-203ENST00000460097 STK32BQ9NY57 414 aa19.57■□□□□ 0.72
CMTM3-203ENST00000460097 TSPYL4Q9UJ04 414 aa19.57■□□□□ 0.72
CMTM3-203ENST00000460097 NUP188Q5SRE5 1749 aa19.56■□□□□ 0.72
CMTM3-203ENST00000460097 SLC15A2Q16348 729 aa19.55■□□□□ 0.72
CMTM3-203ENST00000460097 PAPPAQ13219 1627 aa19.55■□□□□ 0.72
CMTM3-203ENST00000460097 CHL1O00533 1208 aa19.55■□□□□ 0.72
CMTM3-203ENST00000460097 RLBP1P12271 317 aa19.55■□□□□ 0.72
CMTM3-203ENST00000460097 LINC00116Q8NCU8 138 aa19.55■□□□□ 0.72
CMTM3-203ENST00000460097 AKT1S1Q96B36 256 aa19.55■□□□□ 0.72
CMTM3-203ENST00000460097 KCPQ6ZWJ8 1503 aa19.54■□□□□ 0.72
CMTM3-203ENST00000460097 RBM25P49756 843 aaKnown RBP19.54■□□□□ 0.72
CMTM3-203ENST00000460097 SKOR2Q2VWA4 1001 aaPredicted RBP19.54■□□□□ 0.72
CMTM3-203ENST00000460097 CFAP44Q96MT7 982 aa19.54■□□□□ 0.72
CMTM3-203ENST00000460097 GRPEL1Q9HAV7 217 aa19.54■□□□□ 0.72
CMTM3-203ENST00000460097 HSP90AA1P07900 732 aaKnown RBP19.53■□□□□ 0.72
CMTM3-203ENST00000460097 R3HDM1Q15032 1099 aaKnown RBP19.53■□□□□ 0.72
CMTM3-203ENST00000460097 HEG1Q9ULI3 1381 aa19.53■□□□□ 0.72
CMTM3-203ENST00000460097 ZNF827Q17R98 1081 aa19.52■□□□□ 0.72
CMTM3-203ENST00000460097 ZKSCAN2Q63HK3 967 aa19.52■□□□□ 0.72
CMTM3-203ENST00000460097 HSCBQ8IWL3 235 aa19.52■□□□□ 0.72
CMTM3-203ENST00000460097 DNAJC10Q8IXB1 793 aa19.52■□□□□ 0.72
CMTM3-203ENST00000460097 SMC5Q8IY18 1101 aa19.52■□□□□ 0.72
CMTM3-203ENST00000460097 TEX13AQ9BXU3 409 aaPredicted RBP19.52■□□□□ 0.72
CMTM3-203ENST00000460097 TFCP2L1Q9NZI6 479 aa19.52■□□□□ 0.72
CMTM3-203ENST00000460097 EIF4A1P60842 406 aaKnown RBP19.52■□□□□ 0.71
CMTM3-203ENST00000460097 GNAI1P63096 354 aa19.52■□□□□ 0.71
CMTM3-203ENST00000460097 AK7Q96M32 723 aa19.52■□□□□ 0.71
CMTM3-203ENST00000460097 IFT57Q9NWB7 429 aa19.52■□□□□ 0.71
CMTM3-203ENST00000460097 ZNF831Q5JPB2 1677 aa19.51■□□□□ 0.71
CMTM3-203ENST00000460097 SNRPA1P09661 255 aaKnown RBP19.51■□□□□ 0.71
CMTM3-203ENST00000460097 ZNF853P0CG23 659 aa19.51■□□□□ 0.71
CMTM3-203ENST00000460097 UBR2Q8IWV8 1755 aa19.51■□□□□ 0.71
CMTM3-203ENST00000460097 PSDA5PKW4 1024 aaPredicted RBP19.5■□□□□ 0.71
CMTM3-203ENST00000460097 RC3H1Q5TC82 1133 aaKnown RBP19.5■□□□□ 0.71
CMTM3-203ENST00000460097 C5P01031 1676 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms