RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 NASPP49321 788 aaPredicted RBP7.47□□□□□ -1.21
UBQLN4-202ENST00000459954 NLRP6P59044 892 aa7.47□□□□□ -1.21
UBQLN4-202ENST00000459954 LMOD2Q6P5Q4 547 aa7.47□□□□□ -1.21
UBQLN4-202ENST00000459954 ZSCAN30Q86W11 494 aa7.47□□□□□ -1.21
UBQLN4-202ENST00000459954 AEBP1Q8IUX7 1158 aa7.47□□□□□ -1.21
UBQLN4-202ENST00000459954 PDLIM2Q96JY6 352 aa7.47□□□□□ -1.21
UBQLN4-202ENST00000459954 ESYT1Q9BSJ8 1104 aa7.47□□□□□ -1.21
UBQLN4-202ENST00000459954 LRRCC1Q9C099 1032 aa7.47□□□□□ -1.21
UBQLN4-202ENST00000459954 MAP3K19Q56UN5 1328 aa7.47□□□□□ -1.21
UBQLN4-202ENST00000459954 CPDO75976 1380 aa7.46□□□□□ -1.21
UBQLN4-202ENST00000459954 SIPA1L3O60292 1781 aaPredicted RBP7.46□□□□□ -1.21
UBQLN4-202ENST00000459954 COL22A1Q8NFW1 1626 aaPredicted RBP7.46□□□□□ -1.21
UBQLN4-202ENST00000459954 GNAT3A8MTJ3 354 aa7.46□□□□□ -1.22
UBQLN4-202ENST00000459954 PLEKHG5O94827 1062 aa7.46□□□□□ -1.22
UBQLN4-202ENST00000459954 GCP02774 474 aa7.46□□□□□ -1.22
UBQLN4-202ENST00000459954 PDIA4P13667 645 aaKnown RBP7.46□□□□□ -1.22
UBQLN4-202ENST00000459954 MTHFSDQ2M296 383 aaKnown RBP7.46□□□□□ -1.22
UBQLN4-202ENST00000459954 HSP90AB2PQ58FF8 381 aa7.46□□□□□ -1.22
UBQLN4-202ENST00000459954 MCM10Q7L590 875 aa7.46□□□□□ -1.22
UBQLN4-202ENST00000459954 NGLY1Q96IV0 654 aa7.46□□□□□ -1.22
UBQLN4-202ENST00000459954 TSPYL4Q9UJ04 414 aa7.46□□□□□ -1.22
UBQLN4-202ENST00000459954 RRP9O43818 475 aaKnown RBP7.45□□□□□ -1.22
UBQLN4-202ENST00000459954 BRD1O95696 1058 aa7.45□□□□□ -1.22
UBQLN4-202ENST00000459954 MX1P20591 662 aa7.45□□□□□ -1.22
UBQLN4-202ENST00000459954 CHMLP26374 656 aa7.45□□□□□ -1.22
UBQLN4-202ENST00000459954 FLIIQ13045 1269 aa7.45□□□□□ -1.22
UBQLN4-202ENST00000459954 ZSCAN23Q3MJ62 389 aa7.45□□□□□ -1.22
UBQLN4-202ENST00000459954 MCTP1Q6DN14 999 aa7.45□□□□□ -1.22
UBQLN4-202ENST00000459954 LRSAM1Q6UWE0 723 aa7.45□□□□□ -1.22
UBQLN4-202ENST00000459954 SSH3Q8TE77 659 aa7.45□□□□□ -1.22
UBQLN4-202ENST00000459954 UBE2Q2Q8WVN8 375 aa7.45□□□□□ -1.22
UBQLN4-202ENST00000459954 DDX17Q92841 729 aaKnown RBP7.45□□□□□ -1.22
UBQLN4-202ENST00000459954 SYAP1Q96A49 352 aaPredicted RBP7.45□□□□□ -1.22
UBQLN4-202ENST00000459954 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.45□□□□□ -1.22
UBQLN4-202ENST00000459954 HDAC5Q9UQL6 1122 aa7.45□□□□□ -1.22
UBQLN4-202ENST00000459954 MAP3K5Q99683 1374 aa7.45□□□□□ -1.22
UBQLN4-202ENST00000459954 ADAMTS7Q9UKP4 1686 aa7.44□□□□□ -1.22
UBQLN4-202ENST00000459954 CAMTA1Q9Y6Y1 1673 aa7.44□□□□□ -1.22
UBQLN4-202ENST00000459954 OVOS2A0A0G2JMS6 1433 aa7.44□□□□□ -1.22
UBQLN4-202ENST00000459954 ZNF500O60304 480 aaPredicted RBP7.44□□□□□ -1.22
UBQLN4-202ENST00000459954 XPCQ01831 940 aaPredicted RBP7.44□□□□□ -1.22
UBQLN4-202ENST00000459954 TAF7Q15545 349 aaPredicted RBP7.44□□□□□ -1.22
UBQLN4-202ENST00000459954 KRT24Q2M2I5 525 aa7.44□□□□□ -1.22
UBQLN4-202ENST00000459954 UVSSAQ2YD98 709 aa7.44□□□□□ -1.22
UBQLN4-202ENST00000459954 HSP90AB4PQ58FF6 505 aa7.44□□□□□ -1.22
UBQLN4-202ENST00000459954 OTUD7AQ8TE49 926 aaPredicted RBP7.44□□□□□ -1.22
UBQLN4-202ENST00000459954 TMX3Q96JJ7 454 aa7.44□□□□□ -1.22
UBQLN4-202ENST00000459954 EYA1Q99502 592 aa7.44□□□□□ -1.22
UBQLN4-202ENST00000459954 TRPC5Q9UL62 973 aaPredicted RBP7.44□□□□□ -1.22
UBQLN4-202ENST00000459954 ZDHHC9Q9Y397 364 aa7.44□□□□□ -1.22
UBQLN4-202ENST00000459954 USP42Q9H9J4 1324 aaKnown RBP7.44□□□□□ -1.22
UBQLN4-202ENST00000459954 CEMIPQ8WUJ3 1361 aa7.44□□□□□ -1.22
UBQLN4-202ENST00000459954 RGPD2P0DJD1 1756 aa7.43□□□□□ -1.22
UBQLN4-202ENST00000459954 ABCC6O95255 1503 aa7.43□□□□□ -1.22
UBQLN4-202ENST00000459954 NUTM2BA6NNL0 878 aaPredicted RBP7.43□□□□□ -1.22
UBQLN4-202ENST00000459954 NUTM2EB1AL46 878 aaPredicted RBP7.43□□□□□ -1.22
UBQLN4-202ENST00000459954 SMARCA5O60264 1052 aaPredicted RBP7.43□□□□□ -1.22
UBQLN4-202ENST00000459954 OFD1O75665 1012 aa7.43□□□□□ -1.22
UBQLN4-202ENST00000459954 HSPA4P34932 840 aa7.43□□□□□ -1.22
UBQLN4-202ENST00000459954 AMPHP49418 695 aa7.43□□□□□ -1.22
UBQLN4-202ENST00000459954 NEK4P51957 841 aa7.43□□□□□ -1.22
UBQLN4-202ENST00000459954 POLA2Q14181 598 aa7.43□□□□□ -1.22
UBQLN4-202ENST00000459954 CSPP1Q1MSJ5 1256 aa7.43□□□□□ -1.22
UBQLN4-202ENST00000459954 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.43□□□□□ -1.22
UBQLN4-202ENST00000459954 G2E3Q7L622 706 aa7.43□□□□□ -1.22
UBQLN4-202ENST00000459954 UNC5CLQ8IV45 518 aa7.43□□□□□ -1.22
UBQLN4-202ENST00000459954 NUTM2AQ8IVF1 878 aaPredicted RBP7.43□□□□□ -1.22
UBQLN4-202ENST00000459954 TMEM87AQ8NBN3 555 aa7.43□□□□□ -1.22
UBQLN4-202ENST00000459954 NAP1L5Q96NT1 182 aaPredicted RBP7.43□□□□□ -1.22
UBQLN4-202ENST00000459954 PRDM11Q9NQV5 511 aa7.43□□□□□ -1.22
UBQLN4-202ENST00000459954 NOL7Q9UMY1 257 aaKnown RBP7.43□□□□□ -1.22
UBQLN4-202ENST00000459954 THRAP3Q9Y2W1 955 aaKnown RBP7.43□□□□□ -1.22
UBQLN4-202ENST00000459954 ERBB4Q15303 1308 aa7.43□□□□□ -1.22
UBQLN4-202ENST00000459954 WDR33Q9C0J8 1336 aaKnown RBP7.43□□□□□ -1.22
UBQLN4-202ENST00000459954 NCAPD2Q15021 1401 aa7.43□□□□□ -1.22
UBQLN4-202ENST00000459954 PRPF40AO75400 957 aaKnown RBP7.42□□□□□ -1.22
UBQLN4-202ENST00000459954 PHF14O94880 888 aa7.42□□□□□ -1.22
UBQLN4-202ENST00000459954 LETM1O95202 739 aaPredicted RBP7.42□□□□□ -1.22
UBQLN4-202ENST00000459954 MSNP26038 577 aaKnown RBP7.42□□□□□ -1.22
UBQLN4-202ENST00000459954 HOXC9P31274 260 aa7.42□□□□□ -1.22
UBQLN4-202ENST00000459954 RBM6P78332 1123 aaKnown RBP7.42□□□□□ -1.22
UBQLN4-202ENST00000459954 FKBP5Q13451 457 aaPredicted RBP7.42□□□□□ -1.22
UBQLN4-202ENST00000459954 GLIPR1L2Q4G1C9 344 aa7.42□□□□□ -1.22
UBQLN4-202ENST00000459954 CAVIN1Q6NZI2 390 aaKnown RBP7.42□□□□□ -1.22
UBQLN4-202ENST00000459954 ARHGEF25Q86VW2 580 aa7.42□□□□□ -1.22
UBQLN4-202ENST00000459954 FAM184AQ8NB25 1140 aa7.42□□□□□ -1.22
UBQLN4-202ENST00000459954 GPT2Q8TD30 523 aa7.42□□□□□ -1.22
UBQLN4-202ENST00000459954 CDCA7Q9BWT1 371 aaPredicted RBP7.42□□□□□ -1.22
UBQLN4-202ENST00000459954 USP44Q9H0E7 712 aa7.42□□□□□ -1.22
UBQLN4-202ENST00000459954 FOXD4L1Q9NU39 408 aa7.42□□□□□ -1.22
UBQLN4-202ENST00000459954 USP21Q9UK80 565 aa7.42□□□□□ -1.22
UBQLN4-202ENST00000459954 TTC41PQ6P2S7 1318 aa7.42□□□□□ -1.22
UBQLN4-202ENST00000459954 MYH15Q9Y2K3 1946 aa7.42□□□□□ -1.22
UBQLN4-202ENST00000459954 NFAT5O94916 1531 aa7.42□□□□□ -1.22
UBQLN4-202ENST00000459954 ALS2Q96Q42 1657 aa7.41□□□□□ -1.22
UBQLN4-202ENST00000459954 TRPM3Q9HCF6 1732 aaPredicted RBP7.41□□□□□ -1.22
UBQLN4-202ENST00000459954 ONECUT3O60422 494 aaPredicted RBP7.41□□□□□ -1.22
UBQLN4-202ENST00000459954 ADAMTS2O95450 1211 aa7.41□□□□□ -1.22
UBQLN4-202ENST00000459954 UBTFL1P0CB47 393 aaPredicted RBP7.41□□□□□ -1.22
UBQLN4-202ENST00000459954 RXRBP28702 533 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms