RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 POTECB2RU33 542 aa22.79■■□□□ 1.24
TMEM50B-205ENST00000459909 DPY19L2Q6NUT2 758 aa22.79■■□□□ 1.24
TMEM50B-205ENST00000459909 TNNT2P45379 298 aaPredicted RBP22.78■■□□□ 1.24
TMEM50B-205ENST00000459909 NFIXQ14938 502 aa22.78■■□□□ 1.24
TMEM50B-205ENST00000459909 CREBZFQ9NS37 354 aa22.78■■□□□ 1.24
TMEM50B-205ENST00000459909 SOS1Q07889 1333 aaPredicted RBP22.78■■□□□ 1.24
TMEM50B-205ENST00000459909 ADAMTS7Q9UKP4 1686 aa22.77■■□□□ 1.24
TMEM50B-205ENST00000459909 TJP1Q07157 1748 aa22.77■■□□□ 1.23
TMEM50B-205ENST00000459909 NFKBIEO00221 500 aa22.76■■□□□ 1.23
TMEM50B-205ENST00000459909 NARFQ9UHQ1 456 aa22.76■■□□□ 1.23
TMEM50B-205ENST00000459909 SERPINB2P05120 415 aa22.75■■□□□ 1.23
TMEM50B-205ENST00000459909 C2CD5Q86YS7 1000 aa22.75■■□□□ 1.23
TMEM50B-205ENST00000459909 DNAJC10Q8IXB1 793 aa22.75■■□□□ 1.23
TMEM50B-205ENST00000459909 H0YIN7 160 aa22.74■■□□□ 1.23
TMEM50B-205ENST00000459909 MKRN1Q9UHC7 482 aaKnown RBP22.74■■□□□ 1.23
TMEM50B-205ENST00000459909 ZEB1P37275 1124 aaPredicted RBP22.73■■□□□ 1.23
TMEM50B-205ENST00000459909 CHADLQ6NUI6 762 aa22.73■■□□□ 1.23
TMEM50B-205ENST00000459909 TIAM2Q8IVF5 1701 aa22.73■■□□□ 1.23
TMEM50B-205ENST00000459909 PRDM10Q9NQV6 1147 aa22.72■■□□□ 1.23
TMEM50B-205ENST00000459909 NRXN2Q9P2S2 1712 aa22.71■■□□□ 1.23
TMEM50B-205ENST00000459909 CYP19A1P11511 503 aaPredicted RBP22.71■■□□□ 1.23
TMEM50B-205ENST00000459909 AEBP1Q8IUX7 1158 aa22.71■■□□□ 1.23
TMEM50B-205ENST00000459909 COL15A1P39059 1388 aa22.71■■□□□ 1.23
TMEM50B-205ENST00000459909 DLEC1Q9Y238 1755 aa22.71■■□□□ 1.23
TMEM50B-205ENST00000459909 FOXN1O15353 648 aa22.7■■□□□ 1.22
TMEM50B-205ENST00000459909 ERFEQ4G0M1 354 aa22.7■■□□□ 1.22
TMEM50B-205ENST00000459909 BCL2L12Q9HB09 334 aa22.7■■□□□ 1.22
TMEM50B-205ENST00000459909 AFDNP55196 1824 aaKnown RBP22.68■■□□□ 1.22
TMEM50B-205ENST00000459909 SLC34A2O95436 690 aa22.68■■□□□ 1.22
TMEM50B-205ENST00000459909 SLC52A2Q9HAB3 445 aa22.68■■□□□ 1.22
TMEM50B-205ENST00000459909 PDZRN3Q9UPQ7 1066 aa22.68■■□□□ 1.22
TMEM50B-205ENST00000459909 ZBTB1Q9Y2K1 713 aa22.68■■□□□ 1.22
TMEM50B-205ENST00000459909 CNTNAP1P78357 1384 aa22.67■■□□□ 1.22
TMEM50B-205ENST00000459909 CARMIL3Q8ND23 1372 aa22.67■■□□□ 1.22
TMEM50B-205ENST00000459909 CTCFP49711 727 aaPredicted RBP22.66■■□□□ 1.22
TMEM50B-205ENST00000459909 AKAP4Q5JQC9 854 aa22.66■■□□□ 1.22
TMEM50B-205ENST00000459909 SULT6B1Q6IMI4 303 aa22.66■■□□□ 1.22
TMEM50B-205ENST00000459909 C21orf2O43822 256 aa22.65■■□□□ 1.22
TMEM50B-205ENST00000459909 ZNF622Q969S3 477 aaKnown RBP eCLIP22.65■■□□□ 1.223e-7■□□□□ 8.4
TMEM50B-205ENST00000459909 AIDAQ96BJ3 306 aa22.65■■□□□ 1.22
TMEM50B-205ENST00000459909 LTBP3Q9NS15 1303 aa22.64■■□□□ 1.22
TMEM50B-205ENST00000459909 POTEIP0CG38 1075 aa22.64■■□□□ 1.21
TMEM50B-205ENST00000459909 POTEJP0CG39 1038 aa22.64■■□□□ 1.21
TMEM50B-205ENST00000459909 PDE6BP35913 854 aa22.63■■□□□ 1.21
TMEM50B-205ENST00000459909 SLC39A6Q13433 755 aa22.63■■□□□ 1.21
TMEM50B-205ENST00000459909 BICDL1Q6ZP65 573 aa22.63■■□□□ 1.21
TMEM50B-205ENST00000459909 VSIG10Q8N0Z9 540 aa22.63■■□□□ 1.21
TMEM50B-205ENST00000459909 BRIP1Q9BX63 1249 aa22.63■■□□□ 1.21
TMEM50B-205ENST00000459909 TAOK3Q9H2K8 898 aa22.63■■□□□ 1.21
TMEM50B-205ENST00000459909 CCDC88AQ3V6T2 1871 aa22.62■■□□□ 1.21
TMEM50B-205ENST00000459909 PASKQ96RG2 1323 aa22.62■■□□□ 1.21
TMEM50B-205ENST00000459909 DDNO94850 711 aaPredicted RBP22.62■■□□□ 1.21
TMEM50B-205ENST00000459909 LGR6Q9HBX8 967 aa22.62■■□□□ 1.21
TMEM50B-205ENST00000459909 ZNF219Q9P2Y4 722 aaPredicted RBP22.62■■□□□ 1.21
TMEM50B-205ENST00000459909 SCN11AQ9UI33 1791 aa22.62■■□□□ 1.21
TMEM50B-205ENST00000459909 IQCA1LA6NCM1 817 aa22.61■■□□□ 1.21
TMEM50B-205ENST00000459909 LDHDQ86WU2 507 aa22.61■■□□□ 1.21
TMEM50B-205ENST00000459909 POLR3GLQ9BT43 218 aa22.61■■□□□ 1.21
TMEM50B-205ENST00000459909 A0A087WZG4 1122 aa22.6■■□□□ 1.21
TMEM50B-205ENST00000459909 CANXP27824 592 aaKnown RBP22.6■■□□□ 1.21
TMEM50B-205ENST00000459909 MRC1P22897 1456 aa22.6■■□□□ 1.21
TMEM50B-205ENST00000459909 RNMTO43148 476 aaKnown RBP22.59■■□□□ 1.21
TMEM50B-205ENST00000459909 VEGFBP49765 207 aa22.59■■□□□ 1.21
TMEM50B-205ENST00000459909 EIF4G2P78344 907 aaKnown RBP eCLIP22.59■■□□□ 1.21
TMEM50B-205ENST00000459909 TMEM88BA6NKF7 163 aa22.58■■□□□ 1.21
TMEM50B-205ENST00000459909 EIF5P55010 431 aaKnown RBP22.58■■□□□ 1.21
TMEM50B-205ENST00000459909 TBC1D9BQ66K14 1250 aa22.58■■□□□ 1.21
TMEM50B-205ENST00000459909 WBP1LQ9NX94 342 aa22.58■■□□□ 1.21
TMEM50B-205ENST00000459909 DICER1Q9UPY3 1922 aaKnown RBP22.57■■□□□ 1.2
TMEM50B-205ENST00000459909 STARD3NLO95772 234 aa22.57■■□□□ 1.2
TMEM50B-205ENST00000459909 IL13P35225 146 aa22.57■■□□□ 1.2
TMEM50B-205ENST00000459909 SOGA3Q5TF21 947 aa22.57■■□□□ 1.2
TMEM50B-205ENST00000459909 PRR5LQ6MZQ0 368 aa22.57■■□□□ 1.2
TMEM50B-205ENST00000459909 CNKSR1Q969H4 720 aa22.57■■□□□ 1.2
TMEM50B-205ENST00000459909 L3MBTL3Q96JM7 780 aaPredicted RBP22.57■■□□□ 1.2
TMEM50B-205ENST00000459909 FER1L6Q2WGJ9 1857 aa22.56■■□□□ 1.2
TMEM50B-205ENST00000459909 LBX1P52954 281 aa22.56■■□□□ 1.2
TMEM50B-205ENST00000459909 MORC1Q86VD1 984 aa22.56■■□□□ 1.2
TMEM50B-205ENST00000459909 TAF1DQ9H5J8 278 aaPredicted RBP22.56■■□□□ 1.2
TMEM50B-205ENST00000459909 PANK3Q9H999 370 aa22.55■■□□□ 1.2
TMEM50B-205ENST00000459909 ITGBL1O95965 494 aaPredicted RBP22.54■■□□□ 1.2
TMEM50B-205ENST00000459909 HSPA5P11021 654 aaKnown RBP22.54■■□□□ 1.2
TMEM50B-205ENST00000459909 STYK1Q6J9G0 422 aa22.54■■□□□ 1.2
TMEM50B-205ENST00000459909 CCDC24Q8N4L8 307 aa22.53■■□□□ 1.2
TMEM50B-205ENST00000459909 ABHD8Q96I13 439 aa22.53■■□□□ 1.2
TMEM50B-205ENST00000459909 ANKRD31Q8N7Z5 1873 aa22.53■■□□□ 1.2
TMEM50B-205ENST00000459909 FAM161AQ3B820 660 aa22.52■■□□□ 1.2
TMEM50B-205ENST00000459909 PRPF40BQ6NWY9 871 aaKnown RBP22.52■■□□□ 1.2
TMEM50B-205ENST00000459909 SRGNP10124 158 aa22.51■■□□□ 1.19
TMEM50B-205ENST00000459909 TTC5Q8N0Z6 440 aa22.51■■□□□ 1.19
TMEM50B-205ENST00000459909 CNBD1Q8NA66 436 aa22.51■■□□□ 1.19
TMEM50B-205ENST00000459909 MASTLQ96GX5 879 aa22.51■■□□□ 1.19
TMEM50B-205ENST00000459909 COL11A2P13942 1736 aaPredicted RBP22.51■■□□□ 1.19
TMEM50B-205ENST00000459909 RASSF10A6NK89 507 aa22.5■■□□□ 1.19
TMEM50B-205ENST00000459909 NPHP1O15259 732 aa22.5■■□□□ 1.19
TMEM50B-205ENST00000459909 HSPA8P11142 646 aaKnown RBP22.5■■□□□ 1.19
TMEM50B-205ENST00000459909 EAPPQ56P03 285 aaPredicted RBP22.5■■□□□ 1.19
TMEM50B-205ENST00000459909 ST5P78524 1137 aa22.49■■□□□ 1.19
TMEM50B-205ENST00000459909 DEFB115Q30KQ5 88 aa22.49■■□□□ 1.19
TMEM50B-205ENST00000459909 SETDB2Q96T68 719 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms