RNA–Protein interactions for RNA: ENST00000458657.6

C1orf228-218, Transcript of Uncharacterized protein C1orf228, human

APPRIS P2 TSL 5 BASIC

Gene C1orf228, Length 1,818 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1orf228-218	ENST00000458657	MYT1	Q01538	1121 aa		18.52	■□□□□ 0.56
C1orf228-218	ENST00000458657	INTS3	Q68E01	1043 aa	Known RBP	18.52	■□□□□ 0.56
C1orf228-218	ENST00000458657	SLC4A10	Q6U841	1118 aa		18.52	■□□□□ 0.56
C1orf228-218	ENST00000458657	PELP1	Q8IZL8	1130 aa	Known RBP	18.52	■□□□□ 0.56
C1orf228-218	ENST00000458657	SYTL4	Q96C24	671 aa	Predicted RBP	18.52	■□□□□ 0.56
C1orf228-218	ENST00000458657	ZBTB40	Q9NUA8	1239 aa		18.52	■□□□□ 0.56
C1orf228-218	ENST00000458657	N4BP2	Q86UW6	1770 aa	Predicted RBP	18.52	■□□□□ 0.55
C1orf228-218	ENST00000458657	THSD7A	Q9UPZ6	1657 aa		18.52	■□□□□ 0.55
C1orf228-218	ENST00000458657	BCL9	O00512	1426 aa		18.52	■□□□□ 0.55
C1orf228-218	ENST00000458657	PTCD1	O75127	700 aa	Known RBP	18.51	■□□□□ 0.55
C1orf228-218	ENST00000458657	ZBTB7B	O15156	539 aa	Predicted RBP	18.51	■□□□□ 0.55
C1orf228-218	ENST00000458657	ASAP1	Q9ULH1	1129 aa		18.51	■□□□□ 0.55
C1orf228-218	ENST00000458657	USP16	Q9Y5T5	823 aa		18.51	■□□□□ 0.55
C1orf228-218	ENST00000458657	IGHD	P01880	384 aa		18.5	■□□□□ 0.55
C1orf228-218	ENST00000458657	PRIM1	P49642	420 aa	Known RBP	18.49	■□□□□ 0.55
C1orf228-218	ENST00000458657	CENPQ	Q7L2Z9	268 aa	Predicted RBP	18.49	■□□□□ 0.55
C1orf228-218	ENST00000458657	PDIA6	Q15084	440 aa		18.49	■□□□□ 0.55
C1orf228-218	ENST00000458657	DDX21	Q9NR30	783 aa	Known RBP eCLIP	18.49	■□□□□ 0.55
C1orf228-218	ENST00000458657	ATG3	Q9NT62	314 aa		18.49	■□□□□ 0.55
C1orf228-218	ENST00000458657	ATRN	O75882	1429 aa		18.48	■□□□□ 0.55
C1orf228-218	ENST00000458657	PXDNL	A1KZ92	1463 aa		18.48	■□□□□ 0.55
C1orf228-218	ENST00000458657	ACSBG1	Q96GR2	724 aa		18.48	■□□□□ 0.55
C1orf228-218	ENST00000458657	GJD4	Q96KN9	370 aa	Predicted RBP	18.48	■□□□□ 0.55
C1orf228-218	ENST00000458657	MYL6B	P14649	208 aa		18.47	■□□□□ 0.55
C1orf228-218	ENST00000458657	PIP4K2A	P48426	406 aa	Predicted RBP	18.47	■□□□□ 0.55
C1orf228-218	ENST00000458657	CHMP4B	Q9H444	224 aa	Known RBP	18.47	■□□□□ 0.55
C1orf228-218	ENST00000458657	C1orf115	Q9H7X2	142 aa		18.47	■□□□□ 0.55
C1orf228-218	ENST00000458657	HYPK	Q9NX55	129 aa		18.47	■□□□□ 0.55
C1orf228-218	ENST00000458657	CCT4	P50991	539 aa	Known RBP	18.46	■□□□□ 0.55
C1orf228-218	ENST00000458657	TRPC5	Q9UL62	973 aa	Predicted RBP	18.46	■□□□□ 0.55
C1orf228-218	ENST00000458657	ADCY9	O60503	1353 aa		18.46	■□□□□ 0.55
C1orf228-218	ENST00000458657	PI4KAP2	A4QPH2	592 aa		18.45	■□□□□ 0.54
C1orf228-218	ENST00000458657	PI4KAP1	Q8N8J0	262 aa		18.45	■□□□□ 0.54
C1orf228-218	ENST00000458657	AIMP1	Q12904	312 aa	Known RBP	18.44	■□□□□ 0.54
C1orf228-218	ENST00000458657	MEIS3	Q99687	375 aa		18.44	■□□□□ 0.54
C1orf228-218	ENST00000458657	RBM42	Q9BTD8	480 aa	Known RBP	18.44	■□□□□ 0.54
C1orf228-218	ENST00000458657	SKAP1	Q86WV1	359 aa		18.44	■□□□□ 0.54
C1orf228-218	ENST00000458657	DNAAF4	Q8WXU2	420 aa		18.43	■□□□□ 0.54
C1orf228-218	ENST00000458657	RWDD1	Q9H446	243 aa	Predicted RBP	18.43	■□□□□ 0.54
C1orf228-218	ENST00000458657	LRP10	Q7Z4F1	713 aa		18.42	■□□□□ 0.54
C1orf228-218	ENST00000458657	QTRT2	Q9H974	415 aa	Known RBP	18.42	■□□□□ 0.54
C1orf228-218	ENST00000458657	MAP3K2	Q9Y2U5	619 aa		18.42	■□□□□ 0.54
C1orf228-218	ENST00000458657	XAGE3	Q8WTP9	111 aa		18.42	■□□□□ 0.54
C1orf228-218	ENST00000458657	TJP1	Q07157	1748 aa		18.41	■□□□□ 0.54
C1orf228-218	ENST00000458657	NBPF26	B4DH59	902 aa		18.41	■□□□□ 0.54
C1orf228-218	ENST00000458657	KCNQ2	O43526	872 aa		18.41	■□□□□ 0.54
C1orf228-218	ENST00000458657	A1BG	P04217	495 aa		18.41	■□□□□ 0.54
C1orf228-218	ENST00000458657	NBPF14	Q5TI25	921 aa		18.41	■□□□□ 0.54
C1orf228-218	ENST00000458657	NBPF10	Q6P3W6	841 aa	Known RBP	18.41	■□□□□ 0.54
C1orf228-218	ENST00000458657	KSR2	Q6VAB6	950 aa		18.41	■□□□□ 0.54
C1orf228-218	ENST00000458657	COPS6	Q7L5N1	327 aa		18.41	■□□□□ 0.54
C1orf228-218	ENST00000458657	DNAJC10	Q8IXB1	793 aa		18.41	■□□□□ 0.54
C1orf228-218	ENST00000458657	NBPF15	Q8N660	670 aa		18.41	■□□□□ 0.54
C1orf228-218	ENST00000458657	DDX58	O95786	925 aa	Known RBP	18.4	■□□□□ 0.54
C1orf228-218	ENST00000458657	HDAC1	Q13547	482 aa	Predicted RBP	18.4	■□□□□ 0.54
C1orf228-218	ENST00000458657	FAM182B	Q5T319	152 aa		18.4	■□□□□ 0.54
C1orf228-218	ENST00000458657	VSIG10	Q8N0Z9	540 aa		18.4	■□□□□ 0.54
C1orf228-218	ENST00000458657	SLC4A9	Q96Q91	983 aa		18.4	■□□□□ 0.54
C1orf228-218	ENST00000458657	ERBB4	Q15303	1308 aa		18.4	■□□□□ 0.54
C1orf228-218	ENST00000458657	BEND3	Q5T5X7	828 aa		18.39	■□□□□ 0.54
C1orf228-218	ENST00000458657	SRCIN1	Q9C0H9	1055 aa		18.39	■□□□□ 0.54
C1orf228-218	ENST00000458657	ARFGEF2	Q9Y6D5	1785 aa		18.39	■□□□□ 0.53
C1orf228-218	ENST00000458657	ATP10D	Q9P241	1426 aa		18.39	■□□□□ 0.53
C1orf228-218	ENST00000458657	ILDR1	Q86SU0	546 aa	Predicted RBP	18.39	■□□□□ 0.53
C1orf228-218	ENST00000458657	SEPT12	Q8IYM1	358 aa		18.38	■□□□□ 0.53
C1orf228-218	ENST00000458657	ONECUT3	O60422	494 aa	Predicted RBP	18.37	■□□□□ 0.53
C1orf228-218	ENST00000458657	RIC3	Q7Z5B4	369 aa		18.37	■□□□□ 0.53
C1orf228-218	ENST00000458657	SIRT2	Q8IXJ6	389 aa		18.37	■□□□□ 0.53
C1orf228-218	ENST00000458657	TEX13A	Q9BXU3	409 aa	Predicted RBP	18.37	■□□□□ 0.53
C1orf228-218	ENST00000458657	NHS	Q6T4R5	1651 aa		18.37	■□□□□ 0.53
C1orf228-218	ENST00000458657	USP44	Q9H0E7	712 aa		18.36	■□□□□ 0.53
C1orf228-218	ENST00000458657	PALLD	Q8WX93	1383 aa		18.36	■□□□□ 0.53
C1orf228-218	ENST00000458657	NUP188	Q5SRE5	1749 aa		18.36	■□□□□ 0.53
C1orf228-218	ENST00000458657	STARD3NL	O95772	234 aa		18.35	■□□□□ 0.53
C1orf228-218	ENST00000458657	GNAI3	P08754	354 aa		18.35	■□□□□ 0.53
C1orf228-218	ENST00000458657	ANKRD13D	Q6ZTN6	518 aa		18.35	■□□□□ 0.53
C1orf228-218	ENST00000458657	BTAF1	O14981	1849 aa		18.35	■□□□□ 0.53
C1orf228-218	ENST00000458657	BRWD3	Q6RI45	1802 aa		18.35	■□□□□ 0.53
C1orf228-218	ENST00000458657	SBF2	Q86WG5	1849 aa		18.35	■□□□□ 0.53
C1orf228-218	ENST00000458657	CWF19L2	Q2TBE0	894 aa	Known RBP	18.35	■□□□□ 0.53
C1orf228-218	ENST00000458657	CEP85	Q6P2H3	762 aa		18.35	■□□□□ 0.53
C1orf228-218	ENST00000458657	PTF1A	Q7RTS3	328 aa		18.35	■□□□□ 0.53
C1orf228-218	ENST00000458657	AFDN	P55196	1824 aa	Known RBP	18.34	■□□□□ 0.53
C1orf228-218	ENST00000458657	GNAI2	P04899	355 aa		18.34	■□□□□ 0.53
C1orf228-218	ENST00000458657	ZNF330	Q9Y3S2	320 aa	Predicted RBP	18.34	■□□□□ 0.53
C1orf228-218	ENST00000458657	UBTFL1	P0CB47	393 aa	Predicted RBP	18.33	■□□□□ 0.53
C1orf228-218	ENST00000458657	CYP19A1	P11511	503 aa	Predicted RBP	18.33	■□□□□ 0.53
C1orf228-218	ENST00000458657	TTLL7	Q6ZT98	887 aa		18.33	■□□□□ 0.53
C1orf228-218	ENST00000458657	ANKRD44	Q8N8A2	993 aa		18.33	■□□□□ 0.53
C1orf228-218	ENST00000458657	CIC	Q96RK0	1608 aa	Predicted RBP	18.33	■□□□□ 0.52
C1orf228-218	ENST00000458657	LOC102724428	A0A0B4J2F2	783 aa		18.33	■□□□□ 0.52
C1orf228-218	ENST00000458657	ALDH1L1	O75891	902 aa		18.33	■□□□□ 0.52
C1orf228-218	ENST00000458657	SIK1	P57059	783 aa		18.33	■□□□□ 0.52
C1orf228-218	ENST00000458657	LINS1	Q8NG48	757 aa		18.33	■□□□□ 0.52
C1orf228-218	ENST00000458657	MYD88	Q99836	296 aa		18.33	■□□□□ 0.52
C1orf228-218	ENST00000458657	LRRFIP2	Q9Y608	721 aa	Known RBP	18.33	■□□□□ 0.52
C1orf228-218	ENST00000458657	NBPF7	P0C2Y1	421 aa	Predicted RBP	18.32	■□□□□ 0.52
C1orf228-218	ENST00000458657	ATP6V1A	P38606	617 aa		18.32	■□□□□ 0.52
C1orf228-218	ENST00000458657	RGS3	P49796	1198 aa		18.32	■□□□□ 0.52
C1orf228-218	ENST00000458657	RPAP2	Q8IXW5	612 aa	Predicted RBP	18.32	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms