RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 IL2RBP14784 551 aa12.62□□□□□ -0.39
AMBRA1-202ENST00000458649 NBPF6Q5VWK0 638 aa12.62□□□□□ -0.39
AMBRA1-202ENST00000458649 NBPF5PQ86XG9 351 aaPredicted RBP12.62□□□□□ -0.39
AMBRA1-202ENST00000458649 NBPF4Q96M43 638 aa12.62□□□□□ -0.39
AMBRA1-202ENST00000458649 PDCL3Q9H2J4 239 aa12.62□□□□□ -0.39
AMBRA1-202ENST00000458649 PIK3C2GO75747 1445 aa12.62□□□□□ -0.39
AMBRA1-202ENST00000458649 CCDC173Q0VFZ6 552 aa12.62□□□□□ -0.39
AMBRA1-202ENST00000458649 DNAAF4Q8WXU2 420 aa12.62□□□□□ -0.39
AMBRA1-202ENST00000458649 ZNF622Q969S3 477 aaKnown RBP eCLIP12.62□□□□□ -0.396e-7■■■■■ 27
AMBRA1-202ENST00000458649 RUFY1Q96T51 708 aa12.62□□□□□ -0.39
AMBRA1-202ENST00000458649 DNAI2Q9GZS0 605 aa12.62□□□□□ -0.39
AMBRA1-202ENST00000458649 AEBP1Q8IUX7 1158 aa12.62□□□□□ -0.39
AMBRA1-202ENST00000458649 STK11IPQ8N1F8 1099 aa12.62□□□□□ -0.39
AMBRA1-202ENST00000458649 IMMTQ16891 758 aaKnown RBP12.62□□□□□ -0.39
AMBRA1-202ENST00000458649 HDAC9Q9UKV0 1011 aa12.62□□□□□ -0.39
AMBRA1-202ENST00000458649 PPIP5K1Q6PFW1 1433 aa12.62□□□□□ -0.39
AMBRA1-202ENST00000458649 TRIM21P19474 475 aaKnown RBP12.61□□□□□ -0.39
AMBRA1-202ENST00000458649 NYXQ9GZU5 481 aa12.61□□□□□ -0.39
AMBRA1-202ENST00000458649 ARHGEF5Q12774 1597 aa12.61□□□□□ -0.39
AMBRA1-202ENST00000458649 CWC25Q9NXE8 425 aaPredicted RBP12.61□□□□□ -0.39
AMBRA1-202ENST00000458649 ABCA8O94911 1581 aa12.61□□□□□ -0.39
AMBRA1-202ENST00000458649 KCNA6P17658 529 aa12.61□□□□□ -0.39
AMBRA1-202ENST00000458649 BMP2KQ9NSY1 1161 aaPredicted RBP12.61□□□□□ -0.39
AMBRA1-202ENST00000458649 ZNF76P36508 570 aa12.61□□□□□ -0.39
AMBRA1-202ENST00000458649 SETDB2Q96T68 719 aa12.61□□□□□ -0.39
AMBRA1-202ENST00000458649 MBIPQ9NS73 344 aa12.61□□□□□ -0.39
AMBRA1-202ENST00000458649 EXOC6BQ9Y2D4 811 aa12.61□□□□□ -0.39
AMBRA1-202ENST00000458649 MBD5Q9P267 1494 aa12.6□□□□□ -0.39
AMBRA1-202ENST00000458649 CCDC152Q4G0S7 254 aa12.6□□□□□ -0.39
AMBRA1-202ENST00000458649 C16orf71Q8IYS4 520 aaPredicted RBP12.6□□□□□ -0.39
AMBRA1-202ENST00000458649 SDF4Q9BRK5 362 aa12.6□□□□□ -0.39
AMBRA1-202ENST00000458649 EHMT1Q9H9B1 1298 aa12.6□□□□□ -0.39
AMBRA1-202ENST00000458649 MKNK2Q9HBH9 465 aa12.6□□□□□ -0.39
AMBRA1-202ENST00000458649 ESPNB1AK53 854 aa12.6□□□□□ -0.39
AMBRA1-202ENST00000458649 GLRX3O76003 335 aaKnown RBP12.6□□□□□ -0.39
AMBRA1-202ENST00000458649 BAG3O95817 575 aa12.6□□□□□ -0.39
AMBRA1-202ENST00000458649 PPP4R3BQ5MIZ7 849 aa12.6□□□□□ -0.39
AMBRA1-202ENST00000458649 BBXQ8WY36 941 aaPredicted RBP12.6□□□□□ -0.39
AMBRA1-202ENST00000458649 IL1RAPL2Q9NP60 686 aa12.6□□□□□ -0.39
AMBRA1-202ENST00000458649 SKAP1Q86WV1 359 aa12.6□□□□□ -0.39
AMBRA1-202ENST00000458649 NEO1Q92859 1461 aa12.6□□□□□ -0.39
AMBRA1-202ENST00000458649 PTPRCP08575 1304 aa12.6□□□□□ -0.39
AMBRA1-202ENST00000458649 HSP90AB2PQ58FF8 381 aa12.6□□□□□ -0.39
AMBRA1-202ENST00000458649 ERCC4Q92889 916 aaPredicted RBP12.6□□□□□ -0.39
AMBRA1-202ENST00000458649 CCDC85AQ96PX6 553 aaPredicted RBP12.6□□□□□ -0.39
AMBRA1-202ENST00000458649 MPHOSPH6Q99547 160 aaKnown RBP12.6□□□□□ -0.39
AMBRA1-202ENST00000458649 RNF41Q9H4P4 317 aaPredicted RBP12.6□□□□□ -0.39
AMBRA1-202ENST00000458649 POLKQ9UBT6 870 aa12.6□□□□□ -0.39
AMBRA1-202ENST00000458649 FAM83GA6ND36 823 aa12.59□□□□□ -0.39
AMBRA1-202ENST00000458649 NUP133Q8WUM0 1156 aa12.59□□□□□ -0.39
AMBRA1-202ENST00000458649 STK32BQ9NY57 414 aa12.59□□□□□ -0.39
AMBRA1-202ENST00000458649 FOSBP53539 338 aa12.59□□□□□ -0.39
AMBRA1-202ENST00000458649 TTF1Q15361 905 aaPredicted RBP12.59□□□□□ -0.39
AMBRA1-202ENST00000458649 SEC63Q9UGP8 760 aaKnown RBP12.59□□□□□ -0.39
AMBRA1-202ENST00000458649 ATP6V1AP38606 617 aa12.59□□□□□ -0.39
AMBRA1-202ENST00000458649 GSTO1P78417 241 aa12.59□□□□□ -0.39
AMBRA1-202ENST00000458649 PARP3Q9Y6F1 533 aa12.59□□□□□ -0.39
AMBRA1-202ENST00000458649 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.59□□□□□ -0.39
AMBRA1-202ENST00000458649 ADGBQ8N7X0 1667 aa12.59□□□□□ -0.39
AMBRA1-202ENST00000458649 UQCRHLA0A096LP55 91 aa12.59□□□□□ -0.39
AMBRA1-202ENST00000458649 UQCRHP07919 91 aa12.59□□□□□ -0.39
AMBRA1-202ENST00000458649 STIM1Q13586 685 aa12.59□□□□□ -0.39
AMBRA1-202ENST00000458649 NPC1L1Q9UHC9 1359 aa12.59□□□□□ -0.39
AMBRA1-202ENST00000458649 HLA-DOAP06340 250 aa12.58□□□□□ -0.39
AMBRA1-202ENST00000458649 SYCP1Q15431 976 aa12.58□□□□□ -0.39
AMBRA1-202ENST00000458649 BLOC1S2Q6QNY1 142 aa12.58□□□□□ -0.39
AMBRA1-202ENST00000458649 F6X3S4 739 aa12.58□□□□□ -0.4
AMBRA1-202ENST00000458649 NF2P35240 595 aa12.58□□□□□ -0.4
AMBRA1-202ENST00000458649 YTHDC2Q9H6S0 1430 aaKnown RBP12.58□□□□□ -0.4
AMBRA1-202ENST00000458649 MAGEC2Q9UBF1 373 aaPredicted RBP12.58□□□□□ -0.4
AMBRA1-202ENST00000458649 PIK3R4Q99570 1358 aa12.58□□□□□ -0.4
AMBRA1-202ENST00000458649 K7ELQ4 463 aaPredicted RBP12.58□□□□□ -0.4
AMBRA1-202ENST00000458649 TRAK2O60296 914 aa12.58□□□□□ -0.4
AMBRA1-202ENST00000458649 STK38Q15208 465 aa12.58□□□□□ -0.4
AMBRA1-202ENST00000458649 ZGPATQ8N5A5 531 aaKnown RBP12.58□□□□□ -0.4
AMBRA1-202ENST00000458649 CABP5Q9NP86 173 aa12.58□□□□□ -0.4
AMBRA1-202ENST00000458649 RTCBQ9Y3I0 505 aaKnown RBP12.58□□□□□ -0.4
AMBRA1-202ENST00000458649 U3KPZ7 1027 aaPredicted RBP12.58□□□□□ -0.4
AMBRA1-202ENST00000458649 CCDC196A0A1B0GTZ2 297 aa12.58□□□□□ -0.4
AMBRA1-202ENST00000458649 KINO60870 393 aaKnown RBP12.58□□□□□ -0.4
AMBRA1-202ENST00000458649 ZNF444Q8N0Y2 327 aaPredicted RBP12.57□□□□□ -0.4
AMBRA1-202ENST00000458649 NLRP3Q96P20 1036 aa12.57□□□□□ -0.4
AMBRA1-202ENST00000458649 ATP2B1P20020 1258 aa12.57□□□□□ -0.4
AMBRA1-202ENST00000458649 PAF1Q8N7H5 531 aa12.57□□□□□ -0.4
AMBRA1-202ENST00000458649 ZSCAN31Q96LW9 406 aaPredicted RBP12.57□□□□□ -0.4
AMBRA1-202ENST00000458649 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.57□□□□□ -0.42e-6■■■■■ 114.3
AMBRA1-202ENST00000458649 TFCP2L1Q9NZI6 479 aa12.57□□□□□ -0.4
AMBRA1-202ENST00000458649 A0A1W2PP64 1363 aa12.57□□□□□ -0.4
AMBRA1-202ENST00000458649 TRAF1Q13077 416 aa12.57□□□□□ -0.4
AMBRA1-202ENST00000458649 AKAP4Q5JQC9 854 aa12.57□□□□□ -0.4
AMBRA1-202ENST00000458649 ARHGAP45Q92619 1136 aa12.57□□□□□ -0.4
AMBRA1-202ENST00000458649 ZBTB3Q9H5J0 574 aa12.57□□□□□ -0.4
AMBRA1-202ENST00000458649 FLIIQ13045 1269 aa12.57□□□□□ -0.4
AMBRA1-202ENST00000458649 FILIP1LQ4L180 1135 aa12.57□□□□□ -0.4
AMBRA1-202ENST00000458649 PPP4R3AQ6IN85 833 aa12.57□□□□□ -0.4
AMBRA1-202ENST00000458649 OGFOD1Q8N543 542 aa12.57□□□□□ -0.4
AMBRA1-202ENST00000458649 NAPBQ9H115 298 aa12.57□□□□□ -0.4
AMBRA1-202ENST00000458649 ARHGEF10O15013 1369 aa12.56□□□□□ -0.4
AMBRA1-202ENST00000458649 CUL5Q93034 780 aa12.56□□□□□ -0.4
AMBRA1-202ENST00000458649 IQCA1Q86XH1 822 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms