RNA–Protein interactions for RNA: ENST00000458294.5

PBRM1-218, Transcript of polybromo 1, humanhuman

TSL 3

Gene PBRM1, Length 476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-218ENST00000458294 VSIG10Q8N0Z9 540 aa35.7■■■■□ 3.31
PBRM1-218ENST00000458294 NMRK2Q9NPI5 230 aa35.7■■■■□ 3.31
PBRM1-218ENST00000458294 NARFQ9UHQ1 456 aa35.7■■■■□ 3.31
PBRM1-218ENST00000458294 CHRNA5P30532 468 aa35.69■■■■□ 3.3
PBRM1-218ENST00000458294 APLP1P51693 650 aa35.69■■■■□ 3.3
PBRM1-218ENST00000458294 UBR2Q8IWV8 1755 aa35.69■■■■□ 3.3
PBRM1-218ENST00000458294 ZBTB1Q9Y2K1 713 aa35.67■■■■□ 3.3
PBRM1-218ENST00000458294 AFDNP55196 1824 aaKnown RBP35.67■■■■□ 3.3
PBRM1-218ENST00000458294 NRXN2Q9P2S2 1712 aa35.66■■■■□ 3.3
PBRM1-218ENST00000458294 CC2D1BQ5T0F9 858 aaKnown RBP35.66■■■■□ 3.3
PBRM1-218ENST00000458294 NFIXQ14938 502 aa35.64■■■■□ 3.3
PBRM1-218ENST00000458294 RNF181Q9P0P0 153 aa35.63■■■■□ 3.29
PBRM1-218ENST00000458294 SBF1O95248 1867 aa35.62■■■■□ 3.29
PBRM1-218ENST00000458294 KDM2BQ8NHM5 1336 aa35.61■■■■□ 3.29
PBRM1-218ENST00000458294 RBM46Q8TBY0 533 aaKnown RBP35.61■■■■□ 3.29
PBRM1-218ENST00000458294 NPC1L1Q9UHC9 1359 aa35.61■■■■□ 3.29
PBRM1-218ENST00000458294 COL3A1P02461 1466 aaPredicted RBP35.6■■■■□ 3.29
PBRM1-218ENST00000458294 TTC5Q8N0Z6 440 aa35.6■■■■□ 3.29
PBRM1-218ENST00000458294 BCL2L12Q9HB09 334 aa35.6■■■■□ 3.29
PBRM1-218ENST00000458294 DLEC1Q9Y238 1755 aa35.6■■■■□ 3.29
PBRM1-218ENST00000458294 C16orf71Q8IYS4 520 aaPredicted RBP35.59■■■■□ 3.29
PBRM1-218ENST00000458294 SERPINB2P05120 415 aa35.58■■■■□ 3.29
PBRM1-218ENST00000458294 STARD3NLO95772 234 aa35.57■■■■□ 3.28
PBRM1-218ENST00000458294 TNRC6CQ9HCJ0 1690 aaKnown RBP35.56■■■■□ 3.28
PBRM1-218ENST00000458294 CANXP27824 592 aaKnown RBP35.56■■■■□ 3.28
PBRM1-218ENST00000458294 GAS2L2Q8NHY3 880 aa35.55■■■■□ 3.28
PBRM1-218ENST00000458294 EIF5P55010 431 aaKnown RBP35.54■■■■□ 3.28
PBRM1-218ENST00000458294 ZC3H4Q9UPT8 1303 aaKnown RBP35.54■■■■□ 3.28
PBRM1-218ENST00000458294 A0A087WZG4 1122 aa35.53■■■■□ 3.28
PBRM1-218ENST00000458294 U2SURPO15042 1029 aaKnown RBP35.53■■■■□ 3.28
PBRM1-218ENST00000458294 TEFQ10587 303 aa35.53■■■■□ 3.28
PBRM1-218ENST00000458294 WDR90Q96KV7 1748 aa35.53■■■■□ 3.28
PBRM1-218ENST00000458294 SIPA1L3O60292 1781 aaPredicted RBP35.53■■■■□ 3.28
PBRM1-218ENST00000458294 GNAT3A8MTJ3 354 aa35.52■■■■□ 3.28
PBRM1-218ENST00000458294 FSTL1Q12841 308 aa35.52■■■■□ 3.28
PBRM1-218ENST00000458294 DNAJC5GQ8N7S2 189 aa35.52■■■■□ 3.28
PBRM1-218ENST00000458294 TEX13AQ9BXU3 409 aaPredicted RBP35.51■■■■□ 3.28
PBRM1-218ENST00000458294 HEG1Q9ULI3 1381 aa35.51■■■■□ 3.27
PBRM1-218ENST00000458294 ZNF790Q6PG37 636 aa35.5■■■■□ 3.27
PBRM1-218ENST00000458294 TTLL6Q8N841 843 aa35.5■■■■□ 3.27
PBRM1-218ENST00000458294 IL17REQ8NFR9 667 aa35.5■■■■□ 3.27
PBRM1-218ENST00000458294 ZNF496Q96IT1 587 aaPredicted RBP35.5■■■■□ 3.27
PBRM1-218ENST00000458294 RASSF7Q02833 373 aa35.49■■■■□ 3.27
PBRM1-218ENST00000458294 SCN7AQ01118 1682 aa35.49■■■■□ 3.27
PBRM1-218ENST00000458294 C2CD5Q86YS7 1000 aa35.48■■■■□ 3.27
PBRM1-218ENST00000458294 RRAGCQ9HB90 399 aa35.48■■■■□ 3.27
PBRM1-218ENST00000458294 CARMIL3Q8ND23 1372 aa35.48■■■■□ 3.27
PBRM1-218ENST00000458294 H0YIN7 160 aa35.47■■■■□ 3.27
PBRM1-218ENST00000458294 LMNB1P20700 586 aa35.47■■■■□ 3.27
PBRM1-218ENST00000458294 BICDL1Q6ZP65 573 aa35.45■■■■□ 3.27
PBRM1-218ENST00000458294 IL6STP40189 918 aaPredicted RBP35.44■■■■□ 3.26
PBRM1-218ENST00000458294 CNGB1Q14028 1251 aaPredicted RBP35.44■■■■□ 3.26
PBRM1-218ENST00000458294 CEMIPQ8WUJ3 1361 aa35.43■■■■□ 3.26
PBRM1-218ENST00000458294 FMNL2Q96PY5 1086 aa35.43■■■■□ 3.26
PBRM1-218ENST00000458294 PDZRN3Q9UPQ7 1066 aa35.43■■■■□ 3.26
PBRM1-218ENST00000458294 ANKRD31Q8N7Z5 1873 aa35.42■■■■□ 3.26
PBRM1-218ENST00000458294 TBC1D9BQ66K14 1250 aa35.42■■■■□ 3.26
PBRM1-218ENST00000458294 TIAM2Q8IVF5 1701 aa35.4■■■■□ 3.26
PBRM1-218ENST00000458294 GLTPD2A6NH11 291 aa35.39■■■■□ 3.26
PBRM1-218ENST00000458294 PRELPP51888 382 aa35.39■■■■□ 3.26
PBRM1-218ENST00000458294 SMC1BQ8NDV3 1235 aa35.39■■■■□ 3.26
PBRM1-218ENST00000458294 BRIP1Q9BX63 1249 aa35.39■■■■□ 3.26
PBRM1-218ENST00000458294 TBC1D2BQ9UPU7 963 aa35.39■■■■□ 3.26
PBRM1-218ENST00000458294 ZNF330Q9Y3S2 320 aaPredicted RBP35.39■■■■□ 3.26
PBRM1-218ENST00000458294 CCDC88AQ3V6T2 1871 aa35.38■■■■□ 3.25
PBRM1-218ENST00000458294 PDE6BP35913 854 aa35.38■■■■□ 3.25
PBRM1-218ENST00000458294 CFAP53Q96M91 514 aa35.38■■■■□ 3.25
PBRM1-218ENST00000458294 NPM2Q86SE8 214 aaKnown RBP35.37■■■■□ 3.25
PBRM1-218ENST00000458294 NFKBIEO00221 500 aa35.36■■■■□ 3.25
PBRM1-218ENST00000458294 PRKAR2BP31323 418 aa35.36■■■■□ 3.25
PBRM1-218ENST00000458294 PRR5LQ6MZQ0 368 aa35.36■■■■□ 3.25
PBRM1-218ENST00000458294 KLRG1Q96E93 195 aa35.36■■■■□ 3.25
PBRM1-218ENST00000458294 COL11A2P13942 1736 aaPredicted RBP35.35■■■■□ 3.25
PBRM1-218ENST00000458294 BTBD11A6QL63 1104 aa35.35■■■■□ 3.25
PBRM1-218ENST00000458294 PHACTR3Q96KR7 559 aa35.35■■■■□ 3.25
PBRM1-218ENST00000458294 RSPH6AQ9H0K4 717 aa35.35■■■■□ 3.25
PBRM1-218ENST00000458294 VEGFAP15692 232 aaPredicted RBP35.34■■■■□ 3.25
PBRM1-218ENST00000458294 HTRA3P83110 453 aa35.34■■■■□ 3.25
PBRM1-218ENST00000458294 ZNF622Q969S3 477 aaKnown RBP eCLIP35.34■■■■□ 3.25
PBRM1-218ENST00000458294 BCORQ6W2J9 1755 aa35.33■■■■□ 3.25
PBRM1-218ENST00000458294 A1BGP04217 495 aa35.33■■■■□ 3.25
PBRM1-218ENST00000458294 CAMTA2O94983 1202 aa35.31■■■■□ 3.24
PBRM1-218ENST00000458294 SETDB2Q96T68 719 aa35.31■■■■□ 3.24
PBRM1-218ENST00000458294 NUDCQ9Y266 331 aa35.31■■■■□ 3.24
PBRM1-218ENST00000458294 JMYQ8N9B5 988 aa35.3■■■■□ 3.24
PBRM1-218ENST00000458294 FER1L6Q2WGJ9 1857 aa35.3■■■■□ 3.24
PBRM1-218ENST00000458294 KCNQ3O43525 872 aa35.29■■■■□ 3.24
PBRM1-218ENST00000458294 CNBD1Q8NA66 436 aa35.29■■■■□ 3.24
PBRM1-218ENST00000458294 C21orf2O43822 256 aa35.28■■■■□ 3.24
PBRM1-218ENST00000458294 DZIP3Q86Y13 1208 aaKnown RBP35.28■■■■□ 3.24
PBRM1-218ENST00000458294 CCDC24Q8N4L8 307 aa35.28■■■■□ 3.24
PBRM1-218ENST00000458294 DICER1Q9UPY3 1922 aaKnown RBP35.28■■■■□ 3.24
PBRM1-218ENST00000458294 NPHP1O15259 732 aa35.26■■■■□ 3.24
PBRM1-218ENST00000458294 ST5P78524 1137 aa35.26■■■■□ 3.24
PBRM1-218ENST00000458294 DPY19L2Q6NUT2 758 aa35.26■■■■□ 3.24
PBRM1-218ENST00000458294 RTF1Q92541 710 aaKnown RBP35.25■■■■□ 3.23
PBRM1-218ENST00000458294 CNKSR1Q969H4 720 aa35.25■■■■□ 3.23
PBRM1-218ENST00000458294 USP16Q9Y5T5 823 aa35.25■■■■□ 3.23
PBRM1-218ENST00000458294 STYK1Q6J9G0 422 aa35.24■■■■□ 3.23
PBRM1-218ENST00000458294 LTBP3Q9NS15 1303 aa35.24■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms