RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 UBTFL1P0CB47 393 aaPredicted RBP20.38■□□□□ 0.85
CAPN13-203ENST00000458085 BMP2KLQ5H9B9 411 aa20.38■□□□□ 0.85
CAPN13-203ENST00000458085 DDX21Q9NR30 783 aaKnown RBP eCLIP20.38■□□□□ 0.85
CAPN13-203ENST00000458085 MAP3K2Q9Y2U5 619 aa20.38■□□□□ 0.85
CAPN13-203ENST00000458085 USP16Q9Y5T5 823 aa20.38■□□□□ 0.85
CAPN13-203ENST00000458085 AHDC1Q5TGY3 1603 aaPredicted RBP20.38■□□□□ 0.85
CAPN13-203ENST00000458085 NBPF7P0C2Y1 421 aaPredicted RBP20.38■□□□□ 0.85
CAPN13-203ENST00000458085 ATP8B2P98198 1209 aa20.38■□□□□ 0.85
CAPN13-203ENST00000458085 DDX54Q8TDD1 881 aaKnown RBP20.38■□□□□ 0.85
CAPN13-203ENST00000458085 SLC4A3P48751 1232 aa20.37■□□□□ 0.85
CAPN13-203ENST00000458085 TTC5Q8N0Z6 440 aa20.37■□□□□ 0.85
CAPN13-203ENST00000458085 DDRGK1Q96HY6 314 aa20.37■□□□□ 0.85
CAPN13-203ENST00000458085 HYPKQ9NX55 129 aa20.37■□□□□ 0.85
CAPN13-203ENST00000458085 EXOC6BQ9Y2D4 811 aa20.37■□□□□ 0.85
CAPN13-203ENST00000458085 AIMP1Q12904 312 aaKnown RBP20.37■□□□□ 0.85
CAPN13-203ENST00000458085 GLI3P10071 1580 aa20.36■□□□□ 0.85
CAPN13-203ENST00000458085 PIP4K2AP48426 406 aaPredicted RBP20.36■□□□□ 0.85
CAPN13-203ENST00000458085 KSR2Q6VAB6 950 aa20.36■□□□□ 0.85
CAPN13-203ENST00000458085 MYL6BP14649 208 aa20.36■□□□□ 0.85
CAPN13-203ENST00000458085 GSPT1P15170 499 aaKnown RBP20.36■□□□□ 0.85
CAPN13-203ENST00000458085 TBC1D32Q96NH3 1257 aa20.35■□□□□ 0.85
CAPN13-203ENST00000458085 SNRPA1P09661 255 aaKnown RBP20.34■□□□□ 0.85
CAPN13-203ENST00000458085 MFAP1P55081 439 aaKnown RBP20.34■□□□□ 0.85
CAPN13-203ENST00000458085 NKX1-1Q15270 411 aaPredicted RBP20.34■□□□□ 0.85
CAPN13-203ENST00000458085 FMNL2Q96PY5 1086 aa20.34■□□□□ 0.85
CAPN13-203ENST00000458085 COL16A1Q07092 1604 aaPredicted RBP20.34■□□□□ 0.85
CAPN13-203ENST00000458085 CWF19L2Q2TBE0 894 aaKnown RBP20.33■□□□□ 0.85
CAPN13-203ENST00000458085 LRP10Q7Z4F1 713 aa20.33■□□□□ 0.84
CAPN13-203ENST00000458085 COL22A1Q8NFW1 1626 aaPredicted RBP20.32■□□□□ 0.84
CAPN13-203ENST00000458085 COL14A1Q05707 1796 aaKnown RBP20.32■□□□□ 0.84
CAPN13-203ENST00000458085 ERVV-2B6SEH9 535 aa20.32■□□□□ 0.84
CAPN13-203ENST00000458085 PPP1R42Q7Z4L9 355 aa20.32■□□□□ 0.84
CAPN13-203ENST00000458085 XAGE3Q8WTP9 111 aa20.32■□□□□ 0.84
CAPN13-203ENST00000458085 UPF2Q9HAU5 1272 aaKnown RBP20.32■□□□□ 0.84
CAPN13-203ENST00000458085 TOGARAM1Q9Y4F4 1720 aa20.31■□□□□ 0.84
CAPN13-203ENST00000458085 TTC22Q5TAA0 569 aa20.3■□□□□ 0.84
CAPN13-203ENST00000458085 COPS6Q7L5N1 327 aa20.3■□□□□ 0.84
CAPN13-203ENST00000458085 SSH3Q8TE77 659 aa20.3■□□□□ 0.84
CAPN13-203ENST00000458085 IBTKQ9P2D0 1353 aaPredicted RBP20.29■□□□□ 0.84
CAPN13-203ENST00000458085 ALDH1L1O75891 902 aa20.29■□□□□ 0.84
CAPN13-203ENST00000458085 POLA2Q14181 598 aa20.29■□□□□ 0.84
CAPN13-203ENST00000458085 TBC1D9Q6ZT07 1266 aa20.29■□□□□ 0.84
CAPN13-203ENST00000458085 UBR2Q8IWV8 1755 aa20.29■□□□□ 0.84
CAPN13-203ENST00000458085 DDX58O95786 925 aaKnown RBP20.28■□□□□ 0.84
CAPN13-203ENST00000458085 IGKV5-2P06315 115 aa20.28■□□□□ 0.84
CAPN13-203ENST00000458085 RIC3Q7Z5B4 369 aa20.28■□□□□ 0.84
CAPN13-203ENST00000458085 LINS1Q8NG48 757 aa20.28■□□□□ 0.84
CAPN13-203ENST00000458085 C22orf23Q9BZE7 217 aa20.28■□□□□ 0.84
CAPN13-203ENST00000458085 KCPQ6ZWJ8 1503 aa20.27■□□□□ 0.84
CAPN13-203ENST00000458085 PHLPP1O60346 1717 aa20.27■□□□□ 0.84
CAPN13-203ENST00000458085 PAPPAQ13219 1627 aa20.27■□□□□ 0.84
CAPN13-203ENST00000458085 SRGAP3O43295 1099 aa20.27■□□□□ 0.84
CAPN13-203ENST00000458085 LRRCC1Q9C099 1032 aa20.27■□□□□ 0.84
CAPN13-203ENST00000458085 C9orf78Q9NZ63 289 aaPredicted RBP20.27■□□□□ 0.84
CAPN13-203ENST00000458085 LAMB4A4D0S4 1761 aa20.27■□□□□ 0.84
CAPN13-203ENST00000458085 DISP2A7MBM2 1401 aa20.27■□□□□ 0.84
CAPN13-203ENST00000458085 PTCD1O75127 700 aaKnown RBP20.26■□□□□ 0.83
CAPN13-203ENST00000458085 ADAMTS2O95450 1211 aa20.26■□□□□ 0.83
CAPN13-203ENST00000458085 SALL3Q9BXA9 1300 aa20.26■□□□□ 0.83
CAPN13-203ENST00000458085 PIP4K2BP78356 416 aa20.25■□□□□ 0.83
CAPN13-203ENST00000458085 TSHZ3Q63HK5 1081 aa20.25■□□□□ 0.83
CAPN13-203ENST00000458085 NBPF26B4DH59 902 aa20.25■□□□□ 0.83
CAPN13-203ENST00000458085 NBPF14Q5TI25 921 aa20.25■□□□□ 0.83
CAPN13-203ENST00000458085 NBPF10Q6P3W6 841 aaKnown RBP20.25■□□□□ 0.83
CAPN13-203ENST00000458085 NBPF15Q8N660 670 aa20.25■□□□□ 0.83
CAPN13-203ENST00000458085 PDE1AP54750 535 aa20.24■□□□□ 0.83
CAPN13-203ENST00000458085 GRM8O00222 908 aa20.24■□□□□ 0.83
CAPN13-203ENST00000458085 SURF6O75683 361 aaKnown RBP20.24■□□□□ 0.83
CAPN13-203ENST00000458085 ANKRD13DQ6ZTN6 518 aa20.24■□□□□ 0.83
CAPN13-203ENST00000458085 KAZALD1Q96I82 304 aa20.24■□□□□ 0.83
CAPN13-203ENST00000458085 MYD88Q99836 296 aa20.24■□□□□ 0.83
CAPN13-203ENST00000458085 TNS2Q63HR2 1409 aa20.23■□□□□ 0.83
CAPN13-203ENST00000458085 CDC45O75419 566 aa20.23■□□□□ 0.83
CAPN13-203ENST00000458085 SDSP20132 328 aa20.23■□□□□ 0.83
CAPN13-203ENST00000458085 SUCLG2Q96I99 432 aa20.23■□□□□ 0.83
CAPN13-203ENST00000458085 METTL22Q9BUU2 404 aaPredicted RBP20.23■□□□□ 0.83
CAPN13-203ENST00000458085 IL1RAPL2Q9NP60 686 aa20.23■□□□□ 0.83
CAPN13-203ENST00000458085 NEURL1BA8MQ27 555 aa20.23■□□□□ 0.83
CAPN13-203ENST00000458085 PLCH1Q4KWH8 1693 aa20.22■□□□□ 0.83
CAPN13-203ENST00000458085 OSBPL3Q9H4L5 887 aa20.22■□□□□ 0.83
CAPN13-203ENST00000458085 TMOD3Q9NYL9 352 aa20.22■□□□□ 0.83
CAPN13-203ENST00000458085 UTYO14607 1347 aa20.22■□□□□ 0.83
CAPN13-203ENST00000458085 A1BGP04217 495 aa20.22■□□□□ 0.83
CAPN13-203ENST00000458085 MTX1Q13505 466 aa20.22■□□□□ 0.83
CAPN13-203ENST00000458085 PIGBQ92521 554 aa20.22■□□□□ 0.83
CAPN13-203ENST00000458085 DAXXQ9UER7 740 aaPredicted RBP20.21■□□□□ 0.83
CAPN13-203ENST00000458085 KAT6BQ8WYB5 2073 aa20.2■□□□□ 0.82
CAPN13-203ENST00000458085 ASAP1Q9ULH1 1129 aa20.2■□□□□ 0.82
CAPN13-203ENST00000458085 ARFGEF2Q9Y6D5 1785 aa20.2■□□□□ 0.82
CAPN13-203ENST00000458085 NUTM2BA6NNL0 878 aaPredicted RBP20.2■□□□□ 0.82
CAPN13-203ENST00000458085 NUTM2EB1AL46 878 aaPredicted RBP20.2■□□□□ 0.82
CAPN13-203ENST00000458085 NEXNQ0ZGT2 675 aa20.2■□□□□ 0.82
CAPN13-203ENST00000458085 GCKRQ14397 625 aa20.2■□□□□ 0.82
CAPN13-203ENST00000458085 NUTM2AQ8IVF1 878 aaPredicted RBP20.2■□□□□ 0.82
CAPN13-203ENST00000458085 ITGB4P16144 1822 aa20.2■□□□□ 0.82
CAPN13-203ENST00000458085 MX1P20591 662 aa20.19■□□□□ 0.82
CAPN13-203ENST00000458085 RHPN1Q8TCX5 695 aa20.19■□□□□ 0.82
CAPN13-203ENST00000458085 JARID2Q92833 1246 aaPredicted RBP20.19■□□□□ 0.82
CAPN13-203ENST00000458085 BICC1Q9H694 974 aaKnown RBP20.19■□□□□ 0.82
CAPN13-203ENST00000458085 PA2G4Q9UQ80 394 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms