RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 TSPY26PQ9H489 355 aa23.68■■□□□ 1.38
CNEP1R1-203ENST00000458059 TECPR2O15040 1411 aa23.68■■□□□ 1.38
CNEP1R1-203ENST00000458059 TAF7Q15545 349 aaPredicted RBP23.68■■□□□ 1.38
CNEP1R1-203ENST00000458059 TCHHQ07283 1943 aa23.68■■□□□ 1.38
CNEP1R1-203ENST00000458059 HOXC9P31274 260 aa23.67■■□□□ 1.38
CNEP1R1-203ENST00000458059 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.67■■□□□ 1.38
CNEP1R1-203ENST00000458059 RHPN1Q8TCX5 695 aa23.67■■□□□ 1.38
CNEP1R1-203ENST00000458059 SRCIN1Q9C0H9 1055 aa23.67■■□□□ 1.38
CNEP1R1-203ENST00000458059 LGR6Q9HBX8 967 aa23.67■■□□□ 1.38
CNEP1R1-203ENST00000458059 CHPF2Q9P2E5 772 aa23.67■■□□□ 1.38
CNEP1R1-203ENST00000458059 PI4KAP2A4QPH2 592 aa23.67■■□□□ 1.38
CNEP1R1-203ENST00000458059 TPM2P07951 284 aa23.67■■□□□ 1.38
CNEP1R1-203ENST00000458059 MCM2P49736 904 aa23.67■■□□□ 1.38
CNEP1R1-203ENST00000458059 PI4KAP1Q8N8J0 262 aa23.67■■□□□ 1.38
CNEP1R1-203ENST00000458059 USP31Q70CQ4 1352 aa23.67■■□□□ 1.38
CNEP1R1-203ENST00000458059 PTPRUQ92729 1446 aa23.66■■□□□ 1.38
CNEP1R1-203ENST00000458059 GLIPR1L2Q4G1C9 344 aa23.66■■□□□ 1.38
CNEP1R1-203ENST00000458059 ZKSCAN5Q9Y2L8 839 aa23.65■■□□□ 1.38
CNEP1R1-203ENST00000458059 CHMP3Q9Y3E7 222 aa23.65■■□□□ 1.38
CNEP1R1-203ENST00000458059 AK2P54819 239 aa23.65■■□□□ 1.38
CNEP1R1-203ENST00000458059 USP25Q9UHP3 1055 aa23.64■■□□□ 1.38
CNEP1R1-203ENST00000458059 C17orf53Q8N3J3 647 aaPredicted RBP23.64■■□□□ 1.37
CNEP1R1-203ENST00000458059 SNX14Q9Y5W7 946 aa23.64■■□□□ 1.37
CNEP1R1-203ENST00000458059 LARGE1O95461 756 aa23.64■■□□□ 1.37
CNEP1R1-203ENST00000458059 STAP2Q9UGK3 403 aa23.64■■□□□ 1.37
CNEP1R1-203ENST00000458059 PA2G4Q9UQ80 394 aaKnown RBP23.64■■□□□ 1.37
CNEP1R1-203ENST00000458059 HSPA4P34932 840 aa23.63■■□□□ 1.37
CNEP1R1-203ENST00000458059 JARID2Q92833 1246 aaPredicted RBP23.63■■□□□ 1.37
CNEP1R1-203ENST00000458059 EID1Q9Y6B2 187 aa23.63■■□□□ 1.37
CNEP1R1-203ENST00000458059 UQCRHLA0A096LP55 91 aa23.63■■□□□ 1.37
CNEP1R1-203ENST00000458059 UQCRHP07919 91 aa23.63■■□□□ 1.37
CNEP1R1-203ENST00000458059 CASTP20810 708 aaKnown RBP23.63■■□□□ 1.37
CNEP1R1-203ENST00000458059 PI4K2BQ8TCG2 481 aa23.63■■□□□ 1.37
CNEP1R1-203ENST00000458059 AGLP35573 1532 aa23.62■■□□□ 1.37
CNEP1R1-203ENST00000458059 HCLS1P14317 486 aaPredicted RBP23.62■■□□□ 1.37
CNEP1R1-203ENST00000458059 ANAPC15P60006 121 aa23.62■■□□□ 1.37
CNEP1R1-203ENST00000458059 DNTTIP2Q5QJE6 756 aaKnown RBP23.62■■□□□ 1.37
CNEP1R1-203ENST00000458059 CCDC83Q8IWF9 413 aa23.62■■□□□ 1.37
CNEP1R1-203ENST00000458059 KDRP35968 1356 aa23.62■■□□□ 1.37
CNEP1R1-203ENST00000458059 SSH3Q8TE77 659 aa23.61■■□□□ 1.37
CNEP1R1-203ENST00000458059 WDR33Q9C0J8 1336 aaKnown RBP23.61■■□□□ 1.37
CNEP1R1-203ENST00000458059 MAP3K5Q99683 1374 aa23.61■■□□□ 1.37
CNEP1R1-203ENST00000458059 DIP2BQ9P265 1576 aa23.61■■□□□ 1.37
CNEP1R1-203ENST00000458059 MPRIPQ6WCQ1 1025 aa23.61■■□□□ 1.37
CNEP1R1-203ENST00000458059 INTS4Q96HW7 963 aaKnown RBP23.61■■□□□ 1.37
CNEP1R1-203ENST00000458059 TTC21AQ8NDW8 1320 aa23.6■■□□□ 1.37
CNEP1R1-203ENST00000458059 RUFY3Q7L099 469 aa23.6■■□□□ 1.37
CNEP1R1-203ENST00000458059 SGSM2O43147 1006 aa23.6■■□□□ 1.37
CNEP1R1-203ENST00000458059 LRRC59Q96AG4 307 aaKnown RBP23.6■■□□□ 1.37
CNEP1R1-203ENST00000458059 TCEANC2Q96MN5 208 aa23.6■■□□□ 1.37
CNEP1R1-203ENST00000458059 RGPD1P0DJD0 1748 aa23.59■■□□□ 1.37
CNEP1R1-203ENST00000458059 PRPF40BQ6NWY9 871 aaKnown RBP23.59■■□□□ 1.37
CNEP1R1-203ENST00000458059 CCDC39Q9UFE4 941 aa23.59■■□□□ 1.37
CNEP1R1-203ENST00000458059 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.59■■□□□ 1.37
CNEP1R1-203ENST00000458059 SYT1P21579 422 aa23.59■■□□□ 1.37
CNEP1R1-203ENST00000458059 ADCK5Q3MIX3 580 aa23.59■■□□□ 1.37
CNEP1R1-203ENST00000458059 SYAP1Q96A49 352 aaPredicted RBP23.59■■□□□ 1.37
CNEP1R1-203ENST00000458059 RGPD8O14715 1765 aaPredicted RBP23.59■■□□□ 1.37
CNEP1R1-203ENST00000458059 PTH1RQ03431 593 aa23.58■■□□□ 1.37
CNEP1R1-203ENST00000458059 NECAB1Q8N987 351 aa23.58■■□□□ 1.37
CNEP1R1-203ENST00000458059 DIAPH3Q9NSV4 1193 aa23.58■■□□□ 1.37
CNEP1R1-203ENST00000458059 SMC3Q9UQE7 1217 aa23.58■■□□□ 1.37
CNEP1R1-203ENST00000458059 RPAP1Q9BWH6 1393 aaPredicted RBP23.58■■□□□ 1.37
CNEP1R1-203ENST00000458059 VPS37CA5D8V6 355 aaPredicted RBP23.58■■□□□ 1.37
CNEP1R1-203ENST00000458059 COL9A3Q14050 684 aaPredicted RBP23.58■■□□□ 1.37
CNEP1R1-203ENST00000458059 CNTROBQ8N137 903 aa23.58■■□□□ 1.37
CNEP1R1-203ENST00000458059 TSC1Q92574 1164 aa23.58■■□□□ 1.36
CNEP1R1-203ENST00000458059 JAKMIP1Q96N16 626 aaKnown RBP23.58■■□□□ 1.36
CNEP1R1-203ENST00000458059 TTC12Q9H892 705 aaPredicted RBP23.58■■□□□ 1.36
CNEP1R1-203ENST00000458059 RAD50Q92878 1312 aa23.57■■□□□ 1.36
CNEP1R1-203ENST00000458059 PRAMEF22A3QJZ6 481 aa23.57■■□□□ 1.36
CNEP1R1-203ENST00000458059 GIMAP6Q6P9H5 292 aa23.57■■□□□ 1.36
CNEP1R1-203ENST00000458059 KIF1BPQ96EK5 621 aa23.57■■□□□ 1.36
CNEP1R1-203ENST00000458059 LSG1Q9H089 658 aaKnown RBP23.57■■□□□ 1.36
CNEP1R1-203ENST00000458059 SSH2Q76I76 1423 aa23.57■■□□□ 1.36
CNEP1R1-203ENST00000458059 DNAAF4Q8WXU2 420 aa23.57■■□□□ 1.36
CNEP1R1-203ENST00000458059 ZNF500O60304 480 aaPredicted RBP23.56■■□□□ 1.36
CNEP1R1-203ENST00000458059 CWF19L2Q2TBE0 894 aaKnown RBP23.56■■□□□ 1.36
CNEP1R1-203ENST00000458059 FERMT3Q86UX7 667 aa23.56■■□□□ 1.36
CNEP1R1-203ENST00000458059 ZMYND15Q9H091 742 aa23.56■■□□□ 1.36
CNEP1R1-203ENST00000458059 STX6O43752 255 aa23.56■■□□□ 1.36
CNEP1R1-203ENST00000458059 KCNA6P17658 529 aa23.56■■□□□ 1.36
CNEP1R1-203ENST00000458059 NBPF6Q5VWK0 638 aa23.56■■□□□ 1.36
CNEP1R1-203ENST00000458059 LMOD2Q6P5Q4 547 aa23.56■■□□□ 1.36
CNEP1R1-203ENST00000458059 NBPF4Q96M43 638 aa23.56■■□□□ 1.36
CNEP1R1-203ENST00000458059 KCNJ4P48050 445 aa23.55■■□□□ 1.36
CNEP1R1-203ENST00000458059 AIMP1Q12904 312 aaKnown RBP23.55■■□□□ 1.36
CNEP1R1-203ENST00000458059 FAM173BQ6P4H8 233 aa23.55■■□□□ 1.36
CNEP1R1-203ENST00000458059 DNM1Q05193 864 aaKnown RBP23.55■■□□□ 1.36
CNEP1R1-203ENST00000458059 HS1BP3Q53T59 392 aa23.55■■□□□ 1.36
CNEP1R1-203ENST00000458059 C9orf78Q9NZ63 289 aaPredicted RBP23.55■■□□□ 1.36
CNEP1R1-203ENST00000458059 FAM177BA6PVY3 158 aa23.55■■□□□ 1.36
CNEP1R1-203ENST00000458059 ZSCAN22P10073 491 aaPredicted RBP23.55■■□□□ 1.36
CNEP1R1-203ENST00000458059 PROSER3Q2NL68 480 aa23.55■■□□□ 1.36
CNEP1R1-203ENST00000458059 SIL1Q9H173 461 aa23.55■■□□□ 1.36
CNEP1R1-203ENST00000458059 TEFQ10587 303 aa23.54■■□□□ 1.36
CNEP1R1-203ENST00000458059 LIMCH1Q9UPQ0 1083 aa23.53■■□□□ 1.36
CNEP1R1-203ENST00000458059 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.53■■□□□ 1.36
CNEP1R1-203ENST00000458059 GJB2P29033 226 aa23.53■■□□□ 1.36
CNEP1R1-203ENST00000458059 BEND3Q5T5X7 828 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms