RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 C9orf131Q5VYM1 1079 aa19.67■□□□□ 0.74
UPF3AP2-201ENST00000457924 MIER1Q8N108 512 aa19.67■□□□□ 0.74
UPF3AP2-201ENST00000457924 KCNA3P22001 575 aa19.66■□□□□ 0.74
UPF3AP2-201ENST00000457924 CRKLP46109 303 aaKnown RBP19.66■□□□□ 0.74
UPF3AP2-201ENST00000457924 TRIM26Q12899 539 aaPredicted RBP19.66■□□□□ 0.74
UPF3AP2-201ENST00000457924 C16orf71Q8IYS4 520 aaPredicted RBP19.66■□□□□ 0.74
UPF3AP2-201ENST00000457924 NFATC2IPQ8NCF5 419 aa19.66■□□□□ 0.74
UPF3AP2-201ENST00000457924 DALRD3Q5D0E6 543 aaKnown RBP19.65■□□□□ 0.74
UPF3AP2-201ENST00000457924 DNAJC5GQ8N7S2 189 aa19.65■□□□□ 0.74
UPF3AP2-201ENST00000457924 CHADLQ6NUI6 762 aa19.64■□□□□ 0.73
UPF3AP2-201ENST00000457924 AEBP1Q8IUX7 1158 aa19.64■□□□□ 0.73
UPF3AP2-201ENST00000457924 RBM46Q8TBY0 533 aaKnown RBP19.64■□□□□ 0.73
UPF3AP2-201ENST00000457924 PANK3Q9H999 370 aa19.64■□□□□ 0.73
UPF3AP2-201ENST00000457924 SRP68Q9UHB9 627 aaKnown RBP19.64■□□□□ 0.73
UPF3AP2-201ENST00000457924 USP42Q9H9J4 1324 aaKnown RBP19.64■□□□□ 0.73
UPF3AP2-201ENST00000457924 PRKAR2AP13861 404 aaKnown RBP19.63■□□□□ 0.73
UPF3AP2-201ENST00000457924 PLCD3Q8N3E9 789 aa19.63■□□□□ 0.73
UPF3AP2-201ENST00000457924 TJP1Q07157 1748 aa19.62■□□□□ 0.73
UPF3AP2-201ENST00000457924 WDR90Q96KV7 1748 aa19.62■□□□□ 0.73
UPF3AP2-201ENST00000457924 KDM2BQ8NHM5 1336 aa19.62■□□□□ 0.73
UPF3AP2-201ENST00000457924 MORC1Q86VD1 984 aa19.62■□□□□ 0.73
UPF3AP2-201ENST00000457924 DDR1Q08345 913 aa19.61■□□□□ 0.73
UPF3AP2-201ENST00000457924 SULT6B1Q6IMI4 303 aa19.61■□□□□ 0.73
UPF3AP2-201ENST00000457924 RNF181Q9P0P0 153 aa19.61■□□□□ 0.73
UPF3AP2-201ENST00000457924 SCN11AQ9UI33 1791 aa19.61■□□□□ 0.73
UPF3AP2-201ENST00000457924 KCPQ6ZWJ8 1503 aa19.6■□□□□ 0.73
UPF3AP2-201ENST00000457924 ZPR1O75312 459 aa19.59■□□□□ 0.73
UPF3AP2-201ENST00000457924 CHRNA5P30532 468 aa19.59■□□□□ 0.73
UPF3AP2-201ENST00000457924 EIF4G2P78344 907 aaKnown RBP eCLIP19.59■□□□□ 0.73
UPF3AP2-201ENST00000457924 FSTL1Q12841 308 aa19.59■□□□□ 0.73
UPF3AP2-201ENST00000457924 INTS5Q6P9B9 1019 aaKnown RBP19.59■□□□□ 0.73
UPF3AP2-201ENST00000457924 SBF1O95248 1867 aa19.58■□□□□ 0.73
UPF3AP2-201ENST00000457924 POLRMTO00411 1230 aaKnown RBP19.58■□□□□ 0.72
UPF3AP2-201ENST00000457924 TM4SF1P30408 202 aa19.58■□□□□ 0.72
UPF3AP2-201ENST00000457924 ADAMTS7Q9UKP4 1686 aa19.57■□□□□ 0.72
UPF3AP2-201ENST00000457924 AKAP4Q5JQC9 854 aa19.57■□□□□ 0.72
UPF3AP2-201ENST00000457924 USPL1Q5W0Q7 1092 aa19.57■□□□□ 0.72
UPF3AP2-201ENST00000457924 RRAGCQ9HB90 399 aa19.57■□□□□ 0.72
UPF3AP2-201ENST00000457924 CLSPNQ9HAW4 1339 aa19.56■□□□□ 0.72
UPF3AP2-201ENST00000457924 TNRC6CQ9HCJ0 1690 aaKnown RBP19.56■□□□□ 0.72
UPF3AP2-201ENST00000457924 DNAJC10Q8IXB1 793 aa19.56■□□□□ 0.72
UPF3AP2-201ENST00000457924 HSPA5P11021 654 aaKnown RBP19.55■□□□□ 0.72
UPF3AP2-201ENST00000457924 IL13P35225 146 aa19.55■□□□□ 0.72
UPF3AP2-201ENST00000457924 MNX1P50219 401 aaPredicted RBP19.55■□□□□ 0.72
UPF3AP2-201ENST00000457924 KLRG1Q96E93 195 aa19.55■□□□□ 0.72
UPF3AP2-201ENST00000457924 SLC52A2Q9HAB3 445 aa19.55■□□□□ 0.72
UPF3AP2-201ENST00000457924 SOS1Q07889 1333 aaPredicted RBP19.54■□□□□ 0.72
UPF3AP2-201ENST00000457924 HTRA3P83110 453 aa19.54■□□□□ 0.72
UPF3AP2-201ENST00000457924 IFNLR1Q8IU57 520 aaPredicted RBP19.54■□□□□ 0.72
UPF3AP2-201ENST00000457924 KNSTRNQ9Y448 316 aa19.54■□□□□ 0.72
UPF3AP2-201ENST00000457924 AFDNP55196 1824 aaKnown RBP19.53■□□□□ 0.72
UPF3AP2-201ENST00000457924 VIRMAQ69YN4 1812 aaKnown RBP19.53■□□□□ 0.72
UPF3AP2-201ENST00000457924 CYP19A1P11511 503 aaPredicted RBP19.52■□□□□ 0.72
UPF3AP2-201ENST00000457924 SMC1BQ8NDV3 1235 aa19.52■□□□□ 0.72
UPF3AP2-201ENST00000457924 LGR6Q9HBX8 967 aa19.52■□□□□ 0.72
UPF3AP2-201ENST00000457924 NARFQ9UHQ1 456 aa19.52■□□□□ 0.72
UPF3AP2-201ENST00000457924 ZC3H4Q9UPT8 1303 aaKnown RBP19.51■□□□□ 0.71
UPF3AP2-201ENST00000457924 NFIXQ14938 502 aa19.51■□□□□ 0.71
UPF3AP2-201ENST00000457924 JMYQ8N9B5 988 aa19.51■□□□□ 0.71
UPF3AP2-201ENST00000457924 COL15A1P39059 1388 aa19.51■□□□□ 0.71
UPF3AP2-201ENST00000457924 RNMTO43148 476 aaKnown RBP19.5■□□□□ 0.71
UPF3AP2-201ENST00000457924 RASSF7Q02833 373 aa19.5■□□□□ 0.71
UPF3AP2-201ENST00000457924 SLC39A6Q13433 755 aa19.5■□□□□ 0.71
UPF3AP2-201ENST00000457924 PCGF6Q9BYE7 350 aa19.5■□□□□ 0.71
UPF3AP2-201ENST00000457924 NRXN2Q9P2S2 1712 aa19.5■□□□□ 0.71
UPF3AP2-201ENST00000457924 DLEC1Q9Y238 1755 aa19.49■□□□□ 0.71
UPF3AP2-201ENST00000457924 MRC1P22897 1456 aa19.49■□□□□ 0.71
UPF3AP2-201ENST00000457924 SERPINB2P05120 415 aa19.49■□□□□ 0.71
UPF3AP2-201ENST00000457924 LMNB1P20700 586 aa19.49■□□□□ 0.71
UPF3AP2-201ENST00000457924 TTLL6Q8N841 843 aa19.48■□□□□ 0.71
UPF3AP2-201ENST00000457924 ZBTB1Q9Y2K1 713 aa19.48■□□□□ 0.71
UPF3AP2-201ENST00000457924 HMOX1P09601 288 aa19.47■□□□□ 0.71
UPF3AP2-201ENST00000457924 VSIG10Q8N0Z9 540 aa19.47■□□□□ 0.71
UPF3AP2-201ENST00000457924 CCDC88AQ3V6T2 1871 aa19.47■□□□□ 0.71
UPF3AP2-201ENST00000457924 GLTPD2A6NH11 291 aa19.46■□□□□ 0.71
UPF3AP2-201ENST00000457924 H0YIN7 160 aa19.46■□□□□ 0.71
UPF3AP2-201ENST00000457924 C2CD5Q86YS7 1000 aa19.46■□□□□ 0.71
UPF3AP2-201ENST00000457924 FARP1Q9Y4F1 1045 aaPredicted RBP19.46■□□□□ 0.71
UPF3AP2-201ENST00000457924 VEGFAP15692 232 aaPredicted RBP19.45■□□□□ 0.7
UPF3AP2-201ENST00000457924 COL13A1Q5TAT6 717 aaPredicted RBP19.45■□□□□ 0.7
UPF3AP2-201ENST00000457924 BCL2L12Q9HB09 334 aa19.45■□□□□ 0.7
UPF3AP2-201ENST00000457924 CANXP27824 592 aaKnown RBP19.44■□□□□ 0.7
UPF3AP2-201ENST00000457924 MTHFSDQ2M296 383 aaKnown RBP19.44■□□□□ 0.7
UPF3AP2-201ENST00000457924 TIAM2Q8IVF5 1701 aa19.44■□□□□ 0.7
UPF3AP2-201ENST00000457924 UBR2Q8IWV8 1755 aa19.43■□□□□ 0.7
UPF3AP2-201ENST00000457924 A0A087WZG4 1122 aa19.43■□□□□ 0.7
UPF3AP2-201ENST00000457924 STARD3NLO95772 234 aa19.43■□□□□ 0.7
UPF3AP2-201ENST00000457924 AMER1Q5JTC6 1135 aaPredicted RBP19.43■□□□□ 0.7
UPF3AP2-201ENST00000457924 BICDL1Q6ZP65 573 aa19.43■□□□□ 0.7
UPF3AP2-201ENST00000457924 TTC5Q8N0Z6 440 aa19.43■□□□□ 0.7
UPF3AP2-201ENST00000457924 PRELPP51888 382 aa19.42■□□□□ 0.7
UPF3AP2-201ENST00000457924 DIAPH1O60610 1272 aaKnown RBP19.41■□□□□ 0.7
UPF3AP2-201ENST00000457924 ZBTB47Q9UFB7 747 aaPredicted RBP19.41■□□□□ 0.7
UPF3AP2-201ENST00000457924 CARMIL3Q8ND23 1372 aa19.41■□□□□ 0.7
UPF3AP2-201ENST00000457924 EIF5P55010 431 aaKnown RBP19.4■□□□□ 0.7
UPF3AP2-201ENST00000457924 DPY19L2Q6NUT2 758 aa19.4■□□□□ 0.7
UPF3AP2-201ENST00000457924 PDZRN3Q9UPQ7 1066 aa19.4■□□□□ 0.7
UPF3AP2-201ENST00000457924 NFKBIEO00221 500 aa19.39■□□□□ 0.69
UPF3AP2-201ENST00000457924 PDE6BP35913 854 aa19.39■□□□□ 0.69
UPF3AP2-201ENST00000457924 TNS4Q8IZW8 715 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms