RNA–Protein interactions for RNA: ENST00000457153.6

SYT1-204, Transcript of synaptotagmin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYT1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-204ENST00000457153 DNAJC2Q99543 621 aaKnown RBP16.78■□□□□ 0.28
SYT1-204ENST00000457153 AOX1Q06278 1338 aa16.78■□□□□ 0.28
SYT1-204ENST00000457153 IP6K1Q92551 441 aa16.77■□□□□ 0.27
SYT1-204ENST00000457153 INTS4Q96HW7 963 aaKnown RBP16.77■□□□□ 0.27
SYT1-204ENST00000457153 MAP3K2Q9Y2U5 619 aa16.77■□□□□ 0.27
SYT1-204ENST00000457153 USP19O94966 1318 aa16.76■□□□□ 0.27
SYT1-204ENST00000457153 CCDC192P0DO97 292 aa16.76■□□□□ 0.27
SYT1-204ENST00000457153 G2E3Q7L622 706 aa16.76■□□□□ 0.27
SYT1-204ENST00000457153 SYCE3A1L190 88 aa16.76■□□□□ 0.27
SYT1-204ENST00000457153 CPSF1Q10570 1443 aaKnown RBP16.76■□□□□ 0.27
SYT1-204ENST00000457153 RTL1A6NKG5 1358 aa16.76■□□□□ 0.27
SYT1-204ENST00000457153 TTC41PQ6P2S7 1318 aa16.76■□□□□ 0.27
SYT1-204ENST00000457153 EPB41L2O43491 1005 aaKnown RBP16.75■□□□□ 0.27
SYT1-204ENST00000457153 RALYLQ86SE5 291 aaKnown RBP16.75■□□□□ 0.27
SYT1-204ENST00000457153 CHPF2Q9P2E5 772 aa16.75■□□□□ 0.27
SYT1-204ENST00000457153 NPHP1O15259 732 aa16.75■□□□□ 0.27
SYT1-204ENST00000457153 ZC3H6P61129 1189 aaKnown RBP16.75■□□□□ 0.27
SYT1-204ENST00000457153 XPCQ01831 940 aaPredicted RBP16.75■□□□□ 0.27
SYT1-204ENST00000457153 PRPF40BQ6NWY9 871 aaKnown RBP16.75■□□□□ 0.27
SYT1-204ENST00000457153 SYNE3Q6ZMZ3 975 aa16.75■□□□□ 0.27
SYT1-204ENST00000457153 TSHZ3Q63HK5 1081 aa16.75■□□□□ 0.27
SYT1-204ENST00000457153 ANKRD24Q8TF21 1146 aa16.75■□□□□ 0.27
SYT1-204ENST00000457153 PTPRMP28827 1452 aa16.75■□□□□ 0.27
SYT1-204ENST00000457153 ANTXR1Q9H6X2 564 aa16.74■□□□□ 0.27
SYT1-204ENST00000457153 KCNA6P17658 529 aa16.74■□□□□ 0.27
SYT1-204ENST00000457153 CHMLP26374 656 aa16.74■□□□□ 0.27
SYT1-204ENST00000457153 MYO3AQ8NEV4 1616 aa16.74■□□□□ 0.27
SYT1-204ENST00000457153 KSR2Q6VAB6 950 aa16.74■□□□□ 0.27
SYT1-204ENST00000457153 DLC1Q96QB1 1528 aa16.74■□□□□ 0.27
SYT1-204ENST00000457153 DHX16O60231 1041 aaKnown RBP16.74■□□□□ 0.27
SYT1-204ENST00000457153 CCDC183Q5T5S1 534 aa16.74■□□□□ 0.27
SYT1-204ENST00000457153 MAP7D2Q96T17 732 aa16.74■□□□□ 0.27
SYT1-204ENST00000457153 WASHC4Q2M389 1173 aa16.73■□□□□ 0.27
SYT1-204ENST00000457153 USP6P35125 1406 aa16.73■□□□□ 0.27
SYT1-204ENST00000457153 TRIM29Q14134 588 aa16.73■□□□□ 0.27
SYT1-204ENST00000457153 KRT28Q7Z3Y7 464 aa16.73■□□□□ 0.27
SYT1-204ENST00000457153 ARHGEF40Q8TER5 1519 aa16.73■□□□□ 0.27
SYT1-204ENST00000457153 CCDC158Q5M9N0 1113 aa16.73■□□□□ 0.27
SYT1-204ENST00000457153 MTERF4Q7Z6M4 381 aaKnown RBP16.73■□□□□ 0.27
SYT1-204ENST00000457153 ZNF396Q96N95 335 aaPredicted RBP16.72■□□□□ 0.27
SYT1-204ENST00000457153 LTKP29376 864 aa16.72■□□□□ 0.27
SYT1-204ENST00000457153 ZSCAN23Q3MJ62 389 aa16.72■□□□□ 0.27
SYT1-204ENST00000457153 CLCN1P35523 988 aa16.72■□□□□ 0.27
SYT1-204ENST00000457153 OTUD7AQ8TE49 926 aaPredicted RBP16.72■□□□□ 0.27
SYT1-204ENST00000457153 USP32Q8NFA0 1604 aa16.72■□□□□ 0.27
SYT1-204ENST00000457153 CCDC83Q8IWF9 413 aa16.72■□□□□ 0.27
SYT1-204ENST00000457153 R3HCC1Q9Y3T6 440 aaKnown RBP16.72■□□□□ 0.27
SYT1-204ENST00000457153 PPLO60437 1756 aa16.72■□□□□ 0.27
SYT1-204ENST00000457153 GSPT1P15170 499 aaKnown RBP16.71■□□□□ 0.27
SYT1-204ENST00000457153 KIF6Q6ZMV9 814 aa16.71■□□□□ 0.27
SYT1-204ENST00000457153 IFNL2Q8IZJ0 200 aa16.71■□□□□ 0.27
SYT1-204ENST00000457153 LINS1Q8NG48 757 aa16.71■□□□□ 0.27
SYT1-204ENST00000457153 FMNL2Q96PY5 1086 aa16.71■□□□□ 0.27
SYT1-204ENST00000457153 MYD88Q99836 296 aa16.71■□□□□ 0.27
SYT1-204ENST00000457153 TOMM22Q9NS69 142 aa16.71■□□□□ 0.27
SYT1-204ENST00000457153 CFAP45Q9UL16 551 aa16.71■□□□□ 0.27
SYT1-204ENST00000457153 NLRP1Q9C000 1473 aa16.71■□□□□ 0.26
SYT1-204ENST00000457153 STX6O43752 255 aa16.7■□□□□ 0.26
SYT1-204ENST00000457153 HMGN5P82970 282 aaKnown RBP16.7■□□□□ 0.26
SYT1-204ENST00000457153 NAT10Q9H0A0 1025 aaKnown RBP16.7■□□□□ 0.26
SYT1-204ENST00000457153 BOLA2Q9H3K6 86 aa16.7■□□□□ 0.26
SYT1-204ENST00000457153 ROBO2Q9HCK4 1378 aa16.7■□□□□ 0.26
SYT1-204ENST00000457153 APPP05067 770 aa16.7■□□□□ 0.26
SYT1-204ENST00000457153 MCM5P33992 734 aa16.7■□□□□ 0.26
SYT1-204ENST00000457153 PRR36Q9H6K5 1346 aa16.7■□□□□ 0.26
SYT1-204ENST00000457153 MROH2AA6NES4 1674 aa16.7■□□□□ 0.26
SYT1-204ENST00000457153 LRSAM1Q6UWE0 723 aa16.7■□□□□ 0.26
SYT1-204ENST00000457153 SCAND2PQ9GZW5 306 aaPredicted RBP16.7■□□□□ 0.26
SYT1-204ENST00000457153 HMG20BQ9P0W2 317 aa16.7■□□□□ 0.26
SYT1-204ENST00000457153 LRRC7Q96NW7 1537 aa16.7■□□□□ 0.26
SYT1-204ENST00000457153 CTNNA3Q9UI47 895 aa16.7■□□□□ 0.26
SYT1-204ENST00000457153 PIK3C2BO00750 1634 aa16.69■□□□□ 0.26
SYT1-204ENST00000457153 MROH1Q8NDA8 1641 aa16.69■□□□□ 0.26
SYT1-204ENST00000457153 TOM1L2Q6ZVM7 507 aa16.69■□□□□ 0.26
SYT1-204ENST00000457153 GRM8O00222 908 aa16.69■□□□□ 0.26
SYT1-204ENST00000457153 CEP126Q9P2H0 1117 aa16.69■□□□□ 0.26
SYT1-204ENST00000457153 HMGB1P09429 215 aaKnown RBP16.69■□□□□ 0.26
SYT1-204ENST00000457153 CCDC8Q9H0W5 538 aaPredicted RBP16.69■□□□□ 0.26
SYT1-204ENST00000457153 IGSF1Q8N6C5 1336 aa16.69■□□□□ 0.26
SYT1-204ENST00000457153 KINO60870 393 aaKnown RBP16.69■□□□□ 0.26
SYT1-204ENST00000457153 SPATA32Q96LK8 384 aa16.69■□□□□ 0.26
SYT1-204ENST00000457153 TNMDQ9H2S6 317 aa16.69■□□□□ 0.26
SYT1-204ENST00000457153 ANO8Q9HCE9 1232 aaPredicted RBP16.69■□□□□ 0.26
SYT1-204ENST00000457153 U3KPZ7 1027 aaPredicted RBP16.69■□□□□ 0.26
SYT1-204ENST00000457153 PANK2Q9BZ23 570 aa16.68■□□□□ 0.26
SYT1-204ENST00000457153 OSBPL3Q9H4L5 887 aa16.68■□□□□ 0.26
SYT1-204ENST00000457153 CCDC57Q2TAC2 916 aa16.68■□□□□ 0.26
SYT1-204ENST00000457153 NUP62CLQ9H1M0 184 aa16.68■□□□□ 0.26
SYT1-204ENST00000457153 PRDM11Q9NQV5 511 aa16.68■□□□□ 0.26
SYT1-204ENST00000457153 UVSSAQ2YD98 709 aa16.68■□□□□ 0.26
SYT1-204ENST00000457153 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.68■□□□□ 0.26
SYT1-204ENST00000457153 SSH2Q76I76 1423 aa16.67■□□□□ 0.26
SYT1-204ENST00000457153 SNRPA1P09661 255 aaKnown RBP16.67■□□□□ 0.26
SYT1-204ENST00000457153 UBE2HP62256 183 aa16.67■□□□□ 0.26
SYT1-204ENST00000457153 TTC39AQ5SRH9 613 aa16.67■□□□□ 0.26
SYT1-204ENST00000457153 HOOK1Q9UJC3 728 aaKnown RBP16.67■□□□□ 0.26
SYT1-204ENST00000457153 TBC1D2BQ9UPU7 963 aa16.67■□□□□ 0.26
SYT1-204ENST00000457153 ANXA1P04083 346 aa16.67■□□□□ 0.26
SYT1-204ENST00000457153 ZSCAN22P10073 491 aaPredicted RBP16.67■□□□□ 0.26
SYT1-204ENST00000457153 PHAXQ9H814 394 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms