RNA–Protein interactions for RNA: ENST00000457096.1

CROCCP4-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

BASIC

Gene CROCCP4, Length 498 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-201ENST00000457096 POLRMTO00411 1230 aaKnown RBP20.51■□□□□ 0.87
CROCCP4-201ENST00000457096 ZPR1O75312 459 aa20.51■□□□□ 0.87
CROCCP4-201ENST00000457096 FCHSD2O94868 740 aa20.51■□□□□ 0.87
CROCCP4-201ENST00000457096 TM4SF1P30408 202 aa20.51■□□□□ 0.87
CROCCP4-201ENST00000457096 GAS2L2Q8NHY3 880 aa20.51■□□□□ 0.87
CROCCP4-201ENST00000457096 BCL2L12Q9HB09 334 aa20.51■□□□□ 0.87
CROCCP4-201ENST00000457096 UBR2Q8IWV8 1755 aa20.51■□□□□ 0.87
CROCCP4-201ENST00000457096 TEFQ10587 303 aa20.5■□□□□ 0.87
CROCCP4-201ENST00000457096 TTC5Q8N0Z6 440 aa20.5■□□□□ 0.87
CROCCP4-201ENST00000457096 CFAP53Q96M91 514 aa20.5■□□□□ 0.87
CROCCP4-201ENST00000457096 U2AF1L5P0DN76 240 aaPredicted RBP20.49■□□□□ 0.87
CROCCP4-201ENST00000457096 U2AF1Q01081 240 aaKnown RBP eCLIP20.49■□□□□ 0.87
CROCCP4-201ENST00000457096 NFIXQ14938 502 aa20.49■□□□□ 0.87
CROCCP4-201ENST00000457096 ARHGAP27Q6ZUM4 889 aa20.49■□□□□ 0.87
CROCCP4-201ENST00000457096 ZNF790Q6PG37 636 aa20.48■□□□□ 0.87
CROCCP4-201ENST00000457096 GPBP1L1Q9HC44 474 aaPredicted RBP20.48■□□□□ 0.87
CROCCP4-201ENST00000457096 SIPA1L3O60292 1781 aaPredicted RBP20.47■□□□□ 0.87
CROCCP4-201ENST00000457096 DCTN1Q14203 1278 aa20.47■□□□□ 0.87
CROCCP4-201ENST00000457096 BICDL1Q6ZP65 573 aa20.47■□□□□ 0.87
CROCCP4-201ENST00000457096 VSIG10Q8N0Z9 540 aa20.47■□□□□ 0.87
CROCCP4-201ENST00000457096 NARFQ9UHQ1 456 aa20.47■□□□□ 0.87
CROCCP4-201ENST00000457096 ZNF330Q9Y3S2 320 aaPredicted RBP20.47■□□□□ 0.87
CROCCP4-201ENST00000457096 HEG1Q9ULI3 1381 aa20.46■□□□□ 0.87
CROCCP4-201ENST00000457096 PIP4K2AP48426 406 aaPredicted RBP20.46■□□□□ 0.87
CROCCP4-201ENST00000457096 MCM10Q7L590 875 aa20.46■□□□□ 0.87
CROCCP4-201ENST00000457096 CEMIPQ8WUJ3 1361 aa20.46■□□□□ 0.87
CROCCP4-201ENST00000457096 PRAMEF22A3QJZ6 481 aa20.45■□□□□ 0.86
CROCCP4-201ENST00000457096 BRCA1P38398 1863 aaKnown RBP20.45■□□□□ 0.86
CROCCP4-201ENST00000457096 A1BGP04217 495 aa20.44■□□□□ 0.86
CROCCP4-201ENST00000457096 NUDCQ9Y266 331 aa20.44■□□□□ 0.86
CROCCP4-201ENST00000457096 CARMIL3Q8ND23 1372 aa20.44■□□□□ 0.86
CROCCP4-201ENST00000457096 BTBD11A6QL63 1104 aa20.43■□□□□ 0.86
CROCCP4-201ENST00000457096 STARD3NLO95772 234 aa20.43■□□□□ 0.86
CROCCP4-201ENST00000457096 EIF5P55010 431 aaKnown RBP20.43■□□□□ 0.86
CROCCP4-201ENST00000457096 CCDC24Q8N4L8 307 aa20.43■□□□□ 0.86
CROCCP4-201ENST00000457096 PIM2Q9P1W9 311 aa20.43■□□□□ 0.86
CROCCP4-201ENST00000457096 TBC1D2BQ9UPU7 963 aa20.43■□□□□ 0.86
CROCCP4-201ENST00000457096 SERPINB2P05120 415 aa20.42■□□□□ 0.86
CROCCP4-201ENST00000457096 AFDNP55196 1824 aaKnown RBP20.41■□□□□ 0.86
CROCCP4-201ENST00000457096 DALRD3Q5D0E6 543 aaKnown RBP20.41■□□□□ 0.86
CROCCP4-201ENST00000457096 TBC1D9BQ66K14 1250 aa20.41■□□□□ 0.86
CROCCP4-201ENST00000457096 FMNL2Q96PY5 1086 aa20.41■□□□□ 0.86
CROCCP4-201ENST00000457096 USP16Q9Y5T5 823 aa20.41■□□□□ 0.86
CROCCP4-201ENST00000457096 KIF3CO14782 793 aa20.39■□□□□ 0.85
CROCCP4-201ENST00000457096 C9orf131Q5VYM1 1079 aa20.39■□□□□ 0.85
CROCCP4-201ENST00000457096 MIS18AQ9NYP9 233 aa20.39■□□□□ 0.85
CROCCP4-201ENST00000457096 NRXN2Q9P2S2 1712 aa20.38■□□□□ 0.85
CROCCP4-201ENST00000457096 RASSF7Q02833 373 aa20.37■□□□□ 0.85
CROCCP4-201ENST00000457096 RTF1Q92541 710 aaKnown RBP20.37■□□□□ 0.85
CROCCP4-201ENST00000457096 TEX13AQ9BXU3 409 aaPredicted RBP20.36■□□□□ 0.85
CROCCP4-201ENST00000457096 NMRK2Q9NPI5 230 aa20.36■□□□□ 0.85
CROCCP4-201ENST00000457096 ARFGEF1Q9Y6D6 1849 aa20.36■□□□□ 0.85
CROCCP4-201ENST00000457096 SCN7AQ01118 1682 aa20.35■□□□□ 0.85
CROCCP4-201ENST00000457096 A0A087WZG4 1122 aa20.35■□□□□ 0.85
CROCCP4-201ENST00000457096 CAMTA2O94983 1202 aa20.35■□□□□ 0.85
CROCCP4-201ENST00000457096 IL6STP40189 918 aaPredicted RBP20.35■□□□□ 0.85
CROCCP4-201ENST00000457096 C2CD5Q86YS7 1000 aa20.35■□□□□ 0.85
CROCCP4-201ENST00000457096 THUMPD2Q9BTF0 503 aaKnown RBP20.34■□□□□ 0.85
CROCCP4-201ENST00000457096 RNF181Q9P0P0 153 aa20.34■□□□□ 0.85
CROCCP4-201ENST00000457096 CEP350Q5VT06 3117 aa20.33■□□□□ 0.85
CROCCP4-201ENST00000457096 PRELPP51888 382 aa20.33■□□□□ 0.85
CROCCP4-201ENST00000457096 NBPF26B4DH59 902 aa20.32■□□□□ 0.84
CROCCP4-201ENST00000457096 PRR5LQ6MZQ0 368 aa20.32■□□□□ 0.84
CROCCP4-201ENST00000457096 NBPF10Q6P3W6 841 aaKnown RBP20.32■□□□□ 0.84
CROCCP4-201ENST00000457096 DZIP3Q86Y13 1208 aaKnown RBP20.32■□□□□ 0.84
CROCCP4-201ENST00000457096 NBPF15Q8N660 670 aa20.32■□□□□ 0.84
CROCCP4-201ENST00000457096 PLEKHF1Q96S99 279 aa20.32■□□□□ 0.84
CROCCP4-201ENST00000457096 ZNF219Q9P2Y4 722 aaPredicted RBP20.32■□□□□ 0.84
CROCCP4-201ENST00000457096 ANKRD31Q8N7Z5 1873 aa20.3■□□□□ 0.84
CROCCP4-201ENST00000457096 SNRPA1P09661 255 aaKnown RBP20.3■□□□□ 0.84
CROCCP4-201ENST00000457096 H0YIN7 160 aa20.29■□□□□ 0.84
CROCCP4-201ENST00000457096 TAF7Q15545 349 aaPredicted RBP20.29■□□□□ 0.84
CROCCP4-201ENST00000457096 TTLL6Q8N841 843 aa20.29■□□□□ 0.84
CROCCP4-201ENST00000457096 ZNF622Q969S3 477 aaKnown RBP eCLIP20.29■□□□□ 0.84
CROCCP4-201ENST00000457096 COL11A2P13942 1736 aaPredicted RBP20.28■□□□□ 0.84
CROCCP4-201ENST00000457096 HTATSF1O43719 755 aaKnown RBP20.28■□□□□ 0.84
CROCCP4-201ENST00000457096 HSPA6P17066 643 aa20.28■□□□□ 0.84
CROCCP4-201ENST00000457096 DLEC1Q9Y238 1755 aa20.28■□□□□ 0.84
CROCCP4-201ENST00000457096 DLG5Q8TDM6 1919 aa20.27■□□□□ 0.84
CROCCP4-201ENST00000457096 BCORQ6W2J9 1755 aa20.27■□□□□ 0.84
CROCCP4-201ENST00000457096 NPM2Q86SE8 214 aaKnown RBP20.27■□□□□ 0.84
CROCCP4-201ENST00000457096 SETDB2Q96T68 719 aa20.27■□□□□ 0.84
CROCCP4-201ENST00000457096 FAM177BA6PVY3 158 aa20.26■□□□□ 0.83
CROCCP4-201ENST00000457096 DDX10Q13206 875 aaKnown RBP20.26■□□□□ 0.83
CROCCP4-201ENST00000457096 NFE2L2Q16236 605 aa20.26■□□□□ 0.83
CROCCP4-201ENST00000457096 NGEFQ8N5V2 710 aa20.26■□□□□ 0.83
CROCCP4-201ENST00000457096 NFKBIEO00221 500 aa20.25■□□□□ 0.83
CROCCP4-201ENST00000457096 NPHP1O15259 732 aa20.25■□□□□ 0.83
CROCCP4-201ENST00000457096 HLFQ16534 295 aa20.25■□□□□ 0.83
CROCCP4-201ENST00000457096 CNBD1Q8NA66 436 aa20.25■□□□□ 0.83
CROCCP4-201ENST00000457096 BRIP1Q9BX63 1249 aa20.25■□□□□ 0.83
CROCCP4-201ENST00000457096 RRAGCQ9HB90 399 aa20.25■□□□□ 0.83
CROCCP4-201ENST00000457096 SBF1O95248 1867 aa20.24■□□□□ 0.83
CROCCP4-201ENST00000457096 C21orf2O43822 256 aa20.24■□□□□ 0.83
CROCCP4-201ENST00000457096 NEFMP07197 916 aa20.23■□□□□ 0.83
CROCCP4-201ENST00000457096 PDE6BP35913 854 aa20.23■□□□□ 0.83
CROCCP4-201ENST00000457096 TOMM70O94826 608 aa20.22■□□□□ 0.83
CROCCP4-201ENST00000457096 EIF4A1P60842 406 aaKnown RBP20.22■□□□□ 0.83
CROCCP4-201ENST00000457096 KDM3BQ7LBC6 1761 aa20.21■□□□□ 0.83
CROCCP4-201ENST00000457096 LMNB1P20700 586 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms