RNA–Protein interactions for RNA: ENST00000457079.1

LINC00885-201, long intergenic non-protein coding RNA 885, humanhuman

TSL 2 BASIC

Gene LINC00885, Length 1,828 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00885-201ENST00000457079 SRCIN1Q9C0H9 1055 aa13.55□□□□□ -0.24
LINC00885-201ENST00000457079 DDX21Q9NR30 783 aaKnown RBP eCLIP13.55□□□□□ -0.24
LINC00885-201ENST00000457079 C5P01031 1676 aa13.54□□□□□ -0.24
LINC00885-201ENST00000457079 HMMRO75330 724 aa13.54□□□□□ -0.24
LINC00885-201ENST00000457079 PLEKHM2Q8IWE5 1019 aa13.54□□□□□ -0.24
LINC00885-201ENST00000457079 KLHL34Q8N239 644 aa13.54□□□□□ -0.24
LINC00885-201ENST00000457079 COL22A1Q8NFW1 1626 aaPredicted RBP13.54□□□□□ -0.24
LINC00885-201ENST00000457079 STRN4Q9NRL3 753 aa13.54□□□□□ -0.24
LINC00885-201ENST00000457079 LRRFIP2Q9Y608 721 aaKnown RBP13.54□□□□□ -0.24
LINC00885-201ENST00000457079 PNMA6EA0A0J9YXQ4 647 aa13.53□□□□□ -0.24
LINC00885-201ENST00000457079 CABP4P57796 275 aa13.53□□□□□ -0.24
LINC00885-201ENST00000457079 TBC1D32Q96NH3 1257 aa13.53□□□□□ -0.24
LINC00885-201ENST00000457079 HYPKQ9NX55 129 aa13.53□□□□□ -0.24
LINC00885-201ENST00000457079 SHANK3Q9BYB0 1731 aa13.53□□□□□ -0.24
LINC00885-201ENST00000457079 UBTFL1P0CB47 393 aaPredicted RBP13.53□□□□□ -0.24
LINC00885-201ENST00000457079 ATP8B2P98198 1209 aa13.53□□□□□ -0.24
LINC00885-201ENST00000457079 LRP10Q7Z4F1 713 aa13.53□□□□□ -0.24
LINC00885-201ENST00000457079 C16orf71Q8IYS4 520 aaPredicted RBP13.53□□□□□ -0.24
LINC00885-201ENST00000457079 PODXL2Q9NZ53 605 aa13.53□□□□□ -0.24
LINC00885-201ENST00000457079 GSPT1P15170 499 aaKnown RBP13.52□□□□□ -0.25
LINC00885-201ENST00000457079 KSR2Q6VAB6 950 aa13.52□□□□□ -0.25
LINC00885-201ENST00000457079 OTUD7AQ8TE49 926 aaPredicted RBP13.52□□□□□ -0.25
LINC00885-201ENST00000457079 MAP3K2Q9Y2U5 619 aa13.52□□□□□ -0.25
LINC00885-201ENST00000457079 COL16A1Q07092 1604 aaPredicted RBP13.52□□□□□ -0.25
LINC00885-201ENST00000457079 SMARCA5O60264 1052 aaPredicted RBP13.51□□□□□ -0.25
LINC00885-201ENST00000457079 SNRPA1P09661 255 aaKnown RBP13.51□□□□□ -0.25
LINC00885-201ENST00000457079 NBPF7P0C2Y1 421 aaPredicted RBP13.51□□□□□ -0.25
LINC00885-201ENST00000457079 EVA1CP58658 441 aa13.51□□□□□ -0.25
LINC00885-201ENST00000457079 FMNL2Q96PY5 1086 aa13.51□□□□□ -0.25
LINC00885-201ENST00000457079 BTG4Q9NY30 223 aa13.51□□□□□ -0.25
LINC00885-201ENST00000457079 DISP2A7MBM2 1401 aa13.51□□□□□ -0.25
LINC00885-201ENST00000457079 ERVV-2B6SEH9 535 aa13.5□□□□□ -0.25
LINC00885-201ENST00000457079 TTC5Q8N0Z6 440 aa13.5□□□□□ -0.25
LINC00885-201ENST00000457079 USP16Q9Y5T5 823 aa13.5□□□□□ -0.25
LINC00885-201ENST00000457079 IBTKQ9P2D0 1353 aaPredicted RBP13.5□□□□□ -0.25
LINC00885-201ENST00000457079 ALDH1L1O75891 902 aa13.5□□□□□ -0.25
LINC00885-201ENST00000457079 TTC22Q5TAA0 569 aa13.5□□□□□ -0.25
LINC00885-201ENST00000457079 SSH3Q8TE77 659 aa13.5□□□□□ -0.25
LINC00885-201ENST00000457079 EXOC6BQ9Y2D4 811 aa13.5□□□□□ -0.25
LINC00885-201ENST00000457079 COL14A1Q05707 1796 aaKnown RBP13.49□□□□□ -0.25
LINC00885-201ENST00000457079 KCPQ6ZWJ8 1503 aa13.49□□□□□ -0.25
LINC00885-201ENST00000457079 APBB1O00213 710 aa13.49□□□□□ -0.25
LINC00885-201ENST00000457079 POLA2Q14181 598 aa13.49□□□□□ -0.25
LINC00885-201ENST00000457079 UPF2Q9HAU5 1272 aaKnown RBP13.49□□□□□ -0.25
LINC00885-201ENST00000457079 TNS2Q63HR2 1409 aa13.49□□□□□ -0.25
LINC00885-201ENST00000457079 PAPPAQ13219 1627 aa13.48□□□□□ -0.25
LINC00885-201ENST00000457079 SALL3Q9BXA9 1300 aa13.48□□□□□ -0.25
LINC00885-201ENST00000457079 MFAP1P55081 439 aaKnown RBP13.48□□□□□ -0.25
LINC00885-201ENST00000457079 CWF19L2Q2TBE0 894 aaKnown RBP13.48□□□□□ -0.25
LINC00885-201ENST00000457079 DDX54Q8TDD1 881 aaKnown RBP13.48□□□□□ -0.25
LINC00885-201ENST00000457079 XAGE3Q8WTP9 111 aa13.48□□□□□ -0.25
LINC00885-201ENST00000457079 USP35Q9P2H5 1018 aa13.48□□□□□ -0.25
LINC00885-201ENST00000457079 UTYO14607 1347 aa13.47□□□□□ -0.25
LINC00885-201ENST00000457079 DDX58O95786 925 aaKnown RBP13.47□□□□□ -0.25
LINC00885-201ENST00000457079 AIMP1Q12904 312 aaKnown RBP13.47□□□□□ -0.25
LINC00885-201ENST00000457079 TBC1D9Q6ZT07 1266 aa13.47□□□□□ -0.25
LINC00885-201ENST00000457079 PPP1R42Q7Z4L9 355 aa13.47□□□□□ -0.25
LINC00885-201ENST00000457079 LINS1Q8NG48 757 aa13.47□□□□□ -0.25
LINC00885-201ENST00000457079 UBR2Q8IWV8 1755 aa13.47□□□□□ -0.25
LINC00885-201ENST00000457079 TOGARAM1Q9Y4F4 1720 aa13.47□□□□□ -0.25
LINC00885-201ENST00000457079 IGKV5-2P06315 115 aa13.46□□□□□ -0.25
LINC00885-201ENST00000457079 MYL6BP14649 208 aa13.46□□□□□ -0.25
LINC00885-201ENST00000457079 SLC4A3P48751 1232 aa13.46□□□□□ -0.25
LINC00885-201ENST00000457079 MTX1Q13505 466 aa13.46□□□□□ -0.25
LINC00885-201ENST00000457079 COPS6Q7L5N1 327 aa13.46□□□□□ -0.25
LINC00885-201ENST00000457079 OSBPL3Q9H4L5 887 aa13.46□□□□□ -0.25
LINC00885-201ENST00000457079 C22orf23Q9BZE7 217 aa13.46□□□□□ -0.26
LINC00885-201ENST00000457079 LRRCC1Q9C099 1032 aa13.46□□□□□ -0.26
LINC00885-201ENST00000457079 LAMB4A4D0S4 1761 aa13.45□□□□□ -0.26
LINC00885-201ENST00000457079 PIP4K2AP48426 406 aaPredicted RBP13.45□□□□□ -0.26
LINC00885-201ENST00000457079 ERBB4Q15303 1308 aa13.45□□□□□ -0.26
LINC00885-201ENST00000457079 PLCH1Q4KWH8 1693 aa13.44□□□□□ -0.26
LINC00885-201ENST00000457079 GRM8O00222 908 aa13.44□□□□□ -0.26
LINC00885-201ENST00000457079 SRGAP3O43295 1099 aa13.44□□□□□ -0.26
LINC00885-201ENST00000457079 CDC45O75419 566 aa13.44□□□□□ -0.26
LINC00885-201ENST00000457079 PDE1AP54750 535 aa13.44□□□□□ -0.26
LINC00885-201ENST00000457079 KAZALD1Q96I82 304 aa13.44□□□□□ -0.26
LINC00885-201ENST00000457079 NBPF26B4DH59 902 aa13.43□□□□□ -0.26
LINC00885-201ENST00000457079 RBM25P49756 843 aaKnown RBP13.43□□□□□ -0.26
LINC00885-201ENST00000457079 PLCB2Q00722 1185 aa13.43□□□□□ -0.26
LINC00885-201ENST00000457079 NBPF14Q5TI25 921 aa13.43□□□□□ -0.26
LINC00885-201ENST00000457079 NBPF10Q6P3W6 841 aaKnown RBP13.43□□□□□ -0.26
LINC00885-201ENST00000457079 RIC3Q7Z5B4 369 aa13.43□□□□□ -0.26
LINC00885-201ENST00000457079 NBPF15Q8N660 670 aa13.43□□□□□ -0.26
LINC00885-201ENST00000457079 METTL22Q9BUU2 404 aaPredicted RBP13.43□□□□□ -0.26
LINC00885-201ENST00000457079 BCL11AQ9H165 835 aa13.43□□□□□ -0.26
LINC00885-201ENST00000457079 NEURL1BA8MQ27 555 aa13.43□□□□□ -0.26
LINC00885-201ENST00000457079 SDSP20132 328 aa13.43□□□□□ -0.26
LINC00885-201ENST00000457079 C9orf78Q9NZ63 289 aaPredicted RBP13.43□□□□□ -0.26
LINC00885-201ENST00000457079 PHLPP1O60346 1717 aa13.43□□□□□ -0.26
LINC00885-201ENST00000457079 ANKRD13DQ6ZTN6 518 aa13.42□□□□□ -0.26
LINC00885-201ENST00000457079 SUCLG2Q96I99 432 aa13.42□□□□□ -0.26
LINC00885-201ENST00000457079 RAB11FIP3O75154 756 aa13.41□□□□□ -0.26
LINC00885-201ENST00000457079 SURF6O75683 361 aaKnown RBP13.41□□□□□ -0.26
LINC00885-201ENST00000457079 GCKRQ14397 625 aa13.41□□□□□ -0.26
LINC00885-201ENST00000457079 TMOD3Q9NYL9 352 aa13.41□□□□□ -0.26
LINC00885-201ENST00000457079 STAP2Q9UGK3 403 aa13.41□□□□□ -0.26
LINC00885-201ENST00000457079 PTCD1O75127 700 aaKnown RBP13.41□□□□□ -0.26
LINC00885-201ENST00000457079 MX1P20591 662 aa13.41□□□□□ -0.26
LINC00885-201ENST00000457079 TSHZ3Q63HK5 1081 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms