RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 POLRMTO00411 1230 aaKnown RBP17.35■□□□□ 0.37
TREX1-203ENST00000456089 CANXP27824 592 aaKnown RBP17.35■□□□□ 0.37
TREX1-203ENST00000456089 CHRNA5P30532 468 aa17.35■□□□□ 0.37
TREX1-203ENST00000456089 ARHGAP27Q6ZUM4 889 aa17.35■□□□□ 0.37
TREX1-203ENST00000456089 GNAT3A8MTJ3 354 aa17.34■□□□□ 0.37
TREX1-203ENST00000456089 SBF1O95248 1867 aa17.34■□□□□ 0.37
TREX1-203ENST00000456089 TM4SF1P30408 202 aa17.34■□□□□ 0.37
TREX1-203ENST00000456089 PRKAR2BP31323 418 aa17.34■□□□□ 0.37
TREX1-203ENST00000456089 TTC5Q8N0Z6 440 aa17.34■□□□□ 0.37
TREX1-203ENST00000456089 NRXN2Q9P2S2 1712 aa17.34■□□□□ 0.37
TREX1-203ENST00000456089 TEFQ10587 303 aa17.33■□□□□ 0.36
TREX1-203ENST00000456089 GAS2L2Q8NHY3 880 aa17.33■□□□□ 0.36
TREX1-203ENST00000456089 ZNF496Q96IT1 587 aaPredicted RBP17.33■□□□□ 0.36
TREX1-203ENST00000456089 RSPH6AQ9H0K4 717 aa17.33■□□□□ 0.36
TREX1-203ENST00000456089 BCL2L12Q9HB09 334 aa17.33■□□□□ 0.36
TREX1-203ENST00000456089 CCDC88AQ3V6T2 1871 aa17.33■□□□□ 0.36
TREX1-203ENST00000456089 DLEC1Q9Y238 1755 aa17.33■□□□□ 0.36
TREX1-203ENST00000456089 DLG5Q8TDM6 1919 aa17.32■□□□□ 0.36
TREX1-203ENST00000456089 KCNQ3O43525 872 aa17.32■□□□□ 0.36
TREX1-203ENST00000456089 PPP2R1AP30153 589 aa17.32■□□□□ 0.36
TREX1-203ENST00000456089 NFIXQ14938 502 aa17.32■□□□□ 0.36
TREX1-203ENST00000456089 NARFQ9UHQ1 456 aa17.32■□□□□ 0.36
TREX1-203ENST00000456089 SCN7AQ01118 1682 aa17.32■□□□□ 0.36
TREX1-203ENST00000456089 ANKRD31Q8N7Z5 1873 aa17.31■□□□□ 0.36
TREX1-203ENST00000456089 ZEB1P37275 1124 aaPredicted RBP17.31■□□□□ 0.36
TREX1-203ENST00000456089 ZNF790Q6PG37 636 aa17.31■□□□□ 0.36
TREX1-203ENST00000456089 VSIG10Q8N0Z9 540 aa17.31■□□□□ 0.36
TREX1-203ENST00000456089 CFAP53Q96M91 514 aa17.31■□□□□ 0.36
TREX1-203ENST00000456089 ZNF330Q9Y3S2 320 aaPredicted RBP17.31■□□□□ 0.36
TREX1-203ENST00000456089 CACNA1SQ13698 1873 aa17.31■□□□□ 0.36
TREX1-203ENST00000456089 HEG1Q9ULI3 1381 aa17.3■□□□□ 0.36
TREX1-203ENST00000456089 BICDL1Q6ZP65 573 aa17.3■□□□□ 0.36
TREX1-203ENST00000456089 PIM2Q9P1W9 311 aa17.3■□□□□ 0.36
TREX1-203ENST00000456089 CEP350Q5VT06 3117 aa17.29■□□□□ 0.36
TREX1-203ENST00000456089 U2AF1L5P0DN76 240 aaPredicted RBP17.29■□□□□ 0.36
TREX1-203ENST00000456089 U2AF1Q01081 240 aaKnown RBP eCLIP17.29■□□□□ 0.36
TREX1-203ENST00000456089 CARMIL3Q8ND23 1372 aa17.28■□□□□ 0.36
TREX1-203ENST00000456089 CEMIPQ8WUJ3 1361 aa17.28■□□□□ 0.36
TREX1-203ENST00000456089 STARD3NLO95772 234 aa17.28■□□□□ 0.36
TREX1-203ENST00000456089 DALRD3Q5D0E6 543 aaKnown RBP17.28■□□□□ 0.36
TREX1-203ENST00000456089 BCORQ6W2J9 1755 aa17.28■□□□□ 0.36
TREX1-203ENST00000456089 COL11A2P13942 1736 aaPredicted RBP17.27■□□□□ 0.36
TREX1-203ENST00000456089 KIF3CO14782 793 aa17.27■□□□□ 0.36
TREX1-203ENST00000456089 A1BGP04217 495 aa17.27■□□□□ 0.36
TREX1-203ENST00000456089 SERPINB2P05120 415 aa17.27■□□□□ 0.36
TREX1-203ENST00000456089 PIP4K2AP48426 406 aaPredicted RBP17.27■□□□□ 0.36
TREX1-203ENST00000456089 EIF5P55010 431 aaKnown RBP17.27■□□□□ 0.36
TREX1-203ENST00000456089 DCTN1Q14203 1278 aa17.27■□□□□ 0.36
TREX1-203ENST00000456089 MCM10Q7L590 875 aa17.27■□□□□ 0.36
TREX1-203ENST00000456089 TBC1D2BQ9UPU7 963 aa17.27■□□□□ 0.36
TREX1-203ENST00000456089 PRAMEF22A3QJZ6 481 aa17.26■□□□□ 0.35
TREX1-203ENST00000456089 BTBD11A6QL63 1104 aa17.26■□□□□ 0.35
TREX1-203ENST00000456089 C9orf131Q5VYM1 1079 aa17.26■□□□□ 0.35
TREX1-203ENST00000456089 CCDC24Q8N4L8 307 aa17.26■□□□□ 0.35
TREX1-203ENST00000456089 NUDCQ9Y266 331 aa17.26■□□□□ 0.35
TREX1-203ENST00000456089 TBC1D9BQ66K14 1250 aa17.25■□□□□ 0.35
TREX1-203ENST00000456089 FMNL2Q96PY5 1086 aa17.25■□□□□ 0.35
TREX1-203ENST00000456089 RASSF7Q02833 373 aa17.24■□□□□ 0.35
TREX1-203ENST00000456089 NMRK2Q9NPI5 230 aa17.24■□□□□ 0.35
TREX1-203ENST00000456089 RNF181Q9P0P0 153 aa17.23■□□□□ 0.35
TREX1-203ENST00000456089 USP16Q9Y5T5 823 aa17.23■□□□□ 0.35
TREX1-203ENST00000456089 TIAM2Q8IVF5 1701 aa17.22■□□□□ 0.35
TREX1-203ENST00000456089 A0A087WZG4 1122 aa17.22■□□□□ 0.35
TREX1-203ENST00000456089 C2CD5Q86YS7 1000 aa17.22■□□□□ 0.35
TREX1-203ENST00000456089 TEX13AQ9BXU3 409 aaPredicted RBP17.22■□□□□ 0.35
TREX1-203ENST00000456089 HSPA6P17066 643 aa17.21■□□□□ 0.35
TREX1-203ENST00000456089 DDX10Q13206 875 aaKnown RBP17.21■□□□□ 0.35
TREX1-203ENST00000456089 RTF1Q92541 710 aaKnown RBP17.21■□□□□ 0.35
TREX1-203ENST00000456089 LAMB4A4D0S4 1761 aa17.2■□□□□ 0.34
TREX1-203ENST00000456089 IL6STP40189 918 aaPredicted RBP17.2■□□□□ 0.34
TREX1-203ENST00000456089 MIS18AQ9NYP9 233 aa17.2■□□□□ 0.34
TREX1-203ENST00000456089 KDM3BQ7LBC6 1761 aa17.2■□□□□ 0.34
TREX1-203ENST00000456089 CAMTA2O94983 1202 aa17.19■□□□□ 0.34
TREX1-203ENST00000456089 PRELPP51888 382 aa17.19■□□□□ 0.34
TREX1-203ENST00000456089 ZNF219Q9P2Y4 722 aaPredicted RBP17.19■□□□□ 0.34
TREX1-203ENST00000456089 TNRC6CQ9HCJ0 1690 aaKnown RBP17.19■□□□□ 0.34
TREX1-203ENST00000456089 SLX4Q8IY92 1834 aa17.19■□□□□ 0.34
TREX1-203ENST00000456089 H0YIN7 160 aa17.18■□□□□ 0.34
TREX1-203ENST00000456089 PRR5LQ6MZQ0 368 aa17.18■□□□□ 0.34
TREX1-203ENST00000456089 DZIP3Q86Y13 1208 aaKnown RBP17.18■□□□□ 0.34
TREX1-203ENST00000456089 FER1L6Q2WGJ9 1857 aa17.18■□□□□ 0.34
TREX1-203ENST00000456089 NPM2Q86SE8 214 aaKnown RBP17.17■□□□□ 0.34
TREX1-203ENST00000456089 TTLL6Q8N841 843 aa17.17■□□□□ 0.34
TREX1-203ENST00000456089 ZNF622Q969S3 477 aaKnown RBP eCLIP17.17■□□□□ 0.34
TREX1-203ENST00000456089 DICER1Q9UPY3 1922 aaKnown RBP17.17■□□□□ 0.34
TREX1-203ENST00000456089 ARFGEF2Q9Y6D5 1785 aa17.16■□□□□ 0.34
TREX1-203ENST00000456089 NBPF26B4DH59 902 aa17.15■□□□□ 0.34
TREX1-203ENST00000456089 TOMM70O94826 608 aa17.15■□□□□ 0.34
TREX1-203ENST00000456089 SNRPA1P09661 255 aaKnown RBP17.15■□□□□ 0.34
TREX1-203ENST00000456089 RALBP1Q15311 655 aa17.15■□□□□ 0.34
TREX1-203ENST00000456089 NBPF10Q6P3W6 841 aaKnown RBP17.15■□□□□ 0.34
TREX1-203ENST00000456089 NBPF15Q8N660 670 aa17.15■□□□□ 0.34
TREX1-203ENST00000456089 SETDB2Q96T68 719 aa17.15■□□□□ 0.34
TREX1-203ENST00000456089 THUMPD2Q9BTF0 503 aaKnown RBP17.15■□□□□ 0.34
TREX1-203ENST00000456089 RRAGCQ9HB90 399 aa17.15■□□□□ 0.34
TREX1-203ENST00000456089 WDR90Q96KV7 1748 aa17.15■□□□□ 0.34
TREX1-203ENST00000456089 NUP98P52948 1817 aa17.14■□□□□ 0.34
TREX1-203ENST00000456089 NPHP1O15259 732 aa17.14■□□□□ 0.33
TREX1-203ENST00000456089 NEFMP07197 916 aa17.14■□□□□ 0.33
TREX1-203ENST00000456089 NFKBIEO00221 500 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms