RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 RNF181Q9P0P0 153 aa25.4■■□□□ 1.66
MSH6-206ENST00000455383 HMOX1P09601 288 aa25.39■■□□□ 1.66
MSH6-206ENST00000455383 MTHFSDQ2M296 383 aaKnown RBP25.39■■□□□ 1.66
MSH6-206ENST00000455383 VSIG10Q8N0Z9 540 aa25.39■■□□□ 1.66
MSH6-206ENST00000455383 BCL2L12Q9HB09 334 aa25.39■■□□□ 1.66
MSH6-206ENST00000455383 ZBTB1Q9Y2K1 713 aa25.39■■□□□ 1.66
MSH6-206ENST00000455383 COL15A1P39059 1388 aa25.39■■□□□ 1.65
MSH6-206ENST00000455383 KDM2BQ8NHM5 1336 aa25.38■■□□□ 1.65
MSH6-206ENST00000455383 SBF1O95248 1867 aa25.38■■□□□ 1.65
MSH6-206ENST00000455383 KIF7Q2M1P5 1343 aa25.37■■□□□ 1.65
MSH6-206ENST00000455383 AFDNP55196 1824 aaKnown RBP25.37■■□□□ 1.65
MSH6-206ENST00000455383 VIRMAQ69YN4 1812 aaKnown RBP25.37■■□□□ 1.65
MSH6-206ENST00000455383 PER1O15534 1290 aaPredicted RBP25.37■■□□□ 1.65
MSH6-206ENST00000455383 FSTL1Q12841 308 aa25.37■■□□□ 1.65
MSH6-206ENST00000455383 WDR90Q96KV7 1748 aa25.36■■□□□ 1.65
MSH6-206ENST00000455383 UBR2Q8IWV8 1755 aa25.36■■□□□ 1.65
MSH6-206ENST00000455383 C16orf71Q8IYS4 520 aaPredicted RBP25.35■■□□□ 1.65
MSH6-206ENST00000455383 ZC3H4Q9UPT8 1303 aaKnown RBP25.35■■□□□ 1.65
MSH6-206ENST00000455383 DIAPH1O60610 1272 aaKnown RBP25.34■■□□□ 1.65
MSH6-206ENST00000455383 DLEC1Q9Y238 1755 aa25.33■■□□□ 1.65
MSH6-206ENST00000455383 TNRC6CQ9HCJ0 1690 aaKnown RBP25.33■■□□□ 1.65
MSH6-206ENST00000455383 SERPINB2P05120 415 aa25.33■■□□□ 1.65
MSH6-206ENST00000455383 RRAGCQ9HB90 399 aa25.33■■□□□ 1.65
MSH6-206ENST00000455383 PRELPP51888 382 aa25.31■■□□□ 1.64
MSH6-206ENST00000455383 EIF5P55010 431 aaKnown RBP25.31■■□□□ 1.64
MSH6-206ENST00000455383 RASSF7Q02833 373 aa25.31■■□□□ 1.64
MSH6-206ENST00000455383 CCER1Q8TC90 406 aaPredicted RBP25.3■■□□□ 1.64
MSH6-206ENST00000455383 COL3A1P02461 1466 aaPredicted RBP25.29■■□□□ 1.64
MSH6-206ENST00000455383 TTLL6Q8N841 843 aa25.29■■□□□ 1.64
MSH6-206ENST00000455383 KLRG1Q96E93 195 aa25.29■■□□□ 1.64
MSH6-206ENST00000455383 CARMIL3Q8ND23 1372 aa25.29■■□□□ 1.64
MSH6-206ENST00000455383 STARD3NLO95772 234 aa25.28■■□□□ 1.64
MSH6-206ENST00000455383 LMNB1P20700 586 aa25.28■■□□□ 1.64
MSH6-206ENST00000455383 CANXP27824 592 aaKnown RBP25.28■■□□□ 1.64
MSH6-206ENST00000455383 HTRA3P83110 453 aa25.28■■□□□ 1.64
MSH6-206ENST00000455383 JMYQ8N9B5 988 aa25.28■■□□□ 1.64
MSH6-206ENST00000455383 CC2D1BQ5T0F9 858 aaKnown RBP25.27■■□□□ 1.64
MSH6-206ENST00000455383 C2CD5Q86YS7 1000 aa25.27■■□□□ 1.64
MSH6-206ENST00000455383 NPC1L1Q9UHC9 1359 aa25.27■■□□□ 1.64
MSH6-206ENST00000455383 A0A087WZG4 1122 aa25.26■■□□□ 1.63
MSH6-206ENST00000455383 TTC5Q8N0Z6 440 aa25.26■■□□□ 1.63
MSH6-206ENST00000455383 IL17REQ8NFR9 667 aa25.26■■□□□ 1.63
MSH6-206ENST00000455383 GLTPD2A6NH11 291 aa25.25■■□□□ 1.63
MSH6-206ENST00000455383 H0YIN7 160 aa25.25■■□□□ 1.63
MSH6-206ENST00000455383 SMC1BQ8NDV3 1235 aa25.25■■□□□ 1.63
MSH6-206ENST00000455383 ZNF496Q96IT1 587 aaPredicted RBP25.25■■□□□ 1.63
MSH6-206ENST00000455383 HEG1Q9ULI3 1381 aa25.25■■□□□ 1.63
MSH6-206ENST00000455383 ZNF790Q6PG37 636 aa25.24■■□□□ 1.63
MSH6-206ENST00000455383 NFKBIEO00221 500 aa25.23■■□□□ 1.63
MSH6-206ENST00000455383 TEX13AQ9BXU3 409 aaPredicted RBP25.23■■□□□ 1.63
MSH6-206ENST00000455383 SIPA1L3O60292 1781 aaPredicted RBP25.23■■□□□ 1.63
MSH6-206ENST00000455383 GNAT3A8MTJ3 354 aa25.22■■□□□ 1.63
MSH6-206ENST00000455383 TBC1D9BQ66K14 1250 aa25.22■■□□□ 1.63
MSH6-206ENST00000455383 BICDL1Q6ZP65 573 aa25.22■■□□□ 1.63
MSH6-206ENST00000455383 GAS2L2Q8NHY3 880 aa25.22■■□□□ 1.63
MSH6-206ENST00000455383 PDZRN3Q9UPQ7 1066 aa25.22■■□□□ 1.63
MSH6-206ENST00000455383 SCN7AQ01118 1682 aa25.22■■□□□ 1.63
MSH6-206ENST00000455383 ANKRD31Q8N7Z5 1873 aa25.21■■□□□ 1.63
MSH6-206ENST00000455383 VEGFAP15692 232 aaPredicted RBP25.21■■□□□ 1.63
MSH6-206ENST00000455383 BRIP1Q9BX63 1249 aa25.21■■□□□ 1.63
MSH6-206ENST00000455383 IL6STP40189 918 aaPredicted RBP25.2■■□□□ 1.62
MSH6-206ENST00000455383 TEFQ10587 303 aa25.2■■□□□ 1.62
MSH6-206ENST00000455383 CEMIPQ8WUJ3 1361 aa25.19■■□□□ 1.62
MSH6-206ENST00000455383 PRR5LQ6MZQ0 368 aa25.19■■□□□ 1.62
MSH6-206ENST00000455383 TIAM2Q8IVF5 1701 aa25.19■■□□□ 1.62
MSH6-206ENST00000455383 TBC1D2BQ9UPU7 963 aa25.18■■□□□ 1.62
MSH6-206ENST00000455383 CCDC88AQ3V6T2 1871 aa25.17■■□□□ 1.62
MSH6-206ENST00000455383 U2SURPO15042 1029 aaKnown RBP25.17■■□□□ 1.62
MSH6-206ENST00000455383 PDE6BP35913 854 aa25.17■■□□□ 1.62
MSH6-206ENST00000455383 POTECB2RU33 542 aa25.16■■□□□ 1.62
MSH6-206ENST00000455383 COL11A2P13942 1736 aaPredicted RBP25.16■■□□□ 1.62
MSH6-206ENST00000455383 FMNL2Q96PY5 1086 aa25.16■■□□□ 1.62
MSH6-206ENST00000455383 CAMTA2O94983 1202 aa25.15■■□□□ 1.62
MSH6-206ENST00000455383 A1BGP04217 495 aa25.15■■□□□ 1.62
MSH6-206ENST00000455383 ZNF622Q969S3 477 aaKnown RBP eCLIP25.15■■□□□ 1.622e-19■■■■□ 21.7
MSH6-206ENST00000455383 FER1L6Q2WGJ9 1857 aa25.14■■□□□ 1.61
MSH6-206ENST00000455383 C21orf2O43822 256 aa25.13■■□□□ 1.61
MSH6-206ENST00000455383 LTBP3Q9NS15 1303 aa25.12■■□□□ 1.61
MSH6-206ENST00000455383 KCNQ3O43525 872 aa25.12■■□□□ 1.61
MSH6-206ENST00000455383 CCDC24Q8N4L8 307 aa25.12■■□□□ 1.61
MSH6-206ENST00000455383 PHACTR3Q96KR7 559 aa25.12■■□□□ 1.61
MSH6-206ENST00000455383 DICER1Q9UPY3 1922 aaKnown RBP25.12■■□□□ 1.61
MSH6-206ENST00000455383 COL13A1Q5TAT6 717 aaPredicted RBP25.11■■□□□ 1.61
MSH6-206ENST00000455383 DPY19L2Q6NUT2 758 aa25.11■■□□□ 1.61
MSH6-206ENST00000455383 SETDB2Q96T68 719 aa25.11■■□□□ 1.61
MSH6-206ENST00000455383 RSPH6AQ9H0K4 717 aa25.11■■□□□ 1.61
MSH6-206ENST00000455383 ZNF330Q9Y3S2 320 aaPredicted RBP25.11■■□□□ 1.61
MSH6-206ENST00000455383 STYK1Q6J9G0 422 aa25.1■■□□□ 1.61
MSH6-206ENST00000455383 BCORQ6W2J9 1755 aa25.1■■□□□ 1.61
MSH6-206ENST00000455383 BTBD11A6QL63 1104 aa25.09■■□□□ 1.61
MSH6-206ENST00000455383 SRGNP10124 158 aa25.09■■□□□ 1.61
MSH6-206ENST00000455383 PRKAR2BP31323 418 aa25.09■■□□□ 1.61
MSH6-206ENST00000455383 ERFEQ4G0M1 354 aa25.09■■□□□ 1.61
MSH6-206ENST00000455383 CNBD1Q8NA66 436 aa25.09■■□□□ 1.61
MSH6-206ENST00000455383 DZIP3Q86Y13 1208 aaKnown RBP25.08■■□□□ 1.61
MSH6-206ENST00000455383 CNKSR1Q969H4 720 aa25.08■■□□□ 1.61
MSH6-206ENST00000455383 USP16Q9Y5T5 823 aa25.08■■□□□ 1.61
MSH6-206ENST00000455383 PCNTO95613 3336 aa25.07■■□□□ 1.6
MSH6-206ENST00000455383 TAOK3Q9H2K8 898 aa25.07■■□□□ 1.6
MSH6-206ENST00000455383 ZNF219Q9P2Y4 722 aaPredicted RBP25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms