RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 ZNF526Q8TF50 670 aaPredicted RBP11.54□□□□□ -0.56
LINC01940-201ENST00000455228 KIF1BPQ96EK5 621 aa11.54□□□□□ -0.56
LINC01940-201ENST00000455228 ST18O60284 1047 aa11.53□□□□□ -0.56
LINC01940-201ENST00000455228 FBLN1P23142 703 aa11.53□□□□□ -0.56
LINC01940-201ENST00000455228 SIRT2Q8IXJ6 389 aa11.53□□□□□ -0.56
LINC01940-201ENST00000455228 CABP1Q9NZU7 370 aa11.53□□□□□ -0.56
LINC01940-201ENST00000455228 INTS3Q68E01 1043 aaKnown RBP11.53□□□□□ -0.56
LINC01940-201ENST00000455228 PPLO60437 1756 aa11.53□□□□□ -0.56
LINC01940-201ENST00000455228 PHACTR3Q96KR7 559 aa11.52□□□□□ -0.56
LINC01940-201ENST00000455228 CFAP74Q9C0B2 1584 aa11.52□□□□□ -0.56
LINC01940-201ENST00000455228 LMTK2Q8IWU2 1503 aa11.52□□□□□ -0.56
LINC01940-201ENST00000455228 RINLQ6ZS11 566 aa11.52□□□□□ -0.57
LINC01940-201ENST00000455228 CCDC91Q7Z6B0 441 aa11.52□□□□□ -0.57
LINC01940-201ENST00000455228 MPNDQ8N594 471 aa11.52□□□□□ -0.57
LINC01940-201ENST00000455228 PRPF40AO75400 957 aaKnown RBP11.52□□□□□ -0.57
LINC01940-201ENST00000455228 HNRNPH2P55795 449 aaKnown RBP11.52□□□□□ -0.57
LINC01940-201ENST00000455228 ZSCAN23Q3MJ62 389 aa11.52□□□□□ -0.57
LINC01940-201ENST00000455228 IQUBQ8NA54 791 aa11.52□□□□□ -0.57
LINC01940-201ENST00000455228 CEP89Q96ST8 783 aa11.52□□□□□ -0.57
LINC01940-201ENST00000455228 POLKQ9UBT6 870 aa11.52□□□□□ -0.57
LINC01940-201ENST00000455228 ABCA9Q8IUA7 1624 aa11.52□□□□□ -0.57
LINC01940-201ENST00000455228 SPDYE4A6NLX3 237 aa11.51□□□□□ -0.57
LINC01940-201ENST00000455228 GSPT1P15170 499 aaKnown RBP11.51□□□□□ -0.57
LINC01940-201ENST00000455228 LIG1P18858 919 aa11.51□□□□□ -0.57
LINC01940-201ENST00000455228 PLEKHM2Q8IWE5 1019 aa11.51□□□□□ -0.57
LINC01940-201ENST00000455228 MBIPQ9NS73 344 aa11.51□□□□□ -0.57
LINC01940-201ENST00000455228 IFT57Q9NWB7 429 aa11.51□□□□□ -0.57
LINC01940-201ENST00000455228 TDO2P48775 406 aa11.51□□□□□ -0.57
LINC01940-201ENST00000455228 KIAA2012Q0VF49 1180 aa11.51□□□□□ -0.57
LINC01940-201ENST00000455228 KIF18AQ8NI77 898 aa11.51□□□□□ -0.57
LINC01940-201ENST00000455228 CDK19Q9BWU1 502 aa11.51□□□□□ -0.57
LINC01940-201ENST00000455228 COL3A1P02461 1466 aaPredicted RBP11.51□□□□□ -0.57
LINC01940-201ENST00000455228 CD151P48509 253 aa11.51□□□□□ -0.57
LINC01940-201ENST00000455228 ARHGEF1Q92888 912 aaKnown RBP11.51□□□□□ -0.57
LINC01940-201ENST00000455228 CWC22Q9HCG8 908 aaKnown RBP11.51□□□□□ -0.57
LINC01940-201ENST00000455228 MRVI1Q9Y6F6 885 aa11.51□□□□□ -0.57
LINC01940-201ENST00000455228 PLEKHG2Q9H7P9 1386 aa11.5□□□□□ -0.57
LINC01940-201ENST00000455228 C21orf2O43822 256 aa11.5□□□□□ -0.57
LINC01940-201ENST00000455228 CPP00450 1065 aa11.5□□□□□ -0.57
LINC01940-201ENST00000455228 IDI1Q13907 227 aa11.5□□□□□ -0.57
LINC01940-201ENST00000455228 TTC22Q5TAA0 569 aa11.5□□□□□ -0.57
LINC01940-201ENST00000455228 MED14O60244 1454 aa11.5□□□□□ -0.57
LINC01940-201ENST00000455228 HSP90AB4PQ58FF6 505 aa11.5□□□□□ -0.57
LINC01940-201ENST00000455228 DNAJC14Q6Y2X3 702 aaPredicted RBP11.5□□□□□ -0.57
LINC01940-201ENST00000455228 C16orf71Q8IYS4 520 aaPredicted RBP11.5□□□□□ -0.57
LINC01940-201ENST00000455228 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.5□□□□□ -0.57
LINC01940-201ENST00000455228 ABCC4O15439 1325 aa11.5□□□□□ -0.57
LINC01940-201ENST00000455228 FOXD4L5Q5VV16 416 aaPredicted RBP11.5□□□□□ -0.57
LINC01940-201ENST00000455228 FOXD4L4Q8WXT5 416 aaPredicted RBP11.5□□□□□ -0.57
LINC01940-201ENST00000455228 JRKLQ9Y4A0 524 aa11.5□□□□□ -0.57
LINC01940-201ENST00000455228 ANKRD18BA2A2Z9 1011 aa11.49□□□□□ -0.57
LINC01940-201ENST00000455228 PKP1Q13835 747 aa11.49□□□□□ -0.57
LINC01940-201ENST00000455228 TATDN2Q93075 761 aa11.49□□□□□ -0.57
LINC01940-201ENST00000455228 USP26Q9BXU7 913 aa11.49□□□□□ -0.57
LINC01940-201ENST00000455228 AK9Q5TCS8 1911 aa11.49□□□□□ -0.57
LINC01940-201ENST00000455228 KIDINS220Q9ULH0 1771 aa11.49□□□□□ -0.57
LINC01940-201ENST00000455228 KRT222Q8N1A0 295 aa11.49□□□□□ -0.57
LINC01940-201ENST00000455228 C8orf58Q8NAV2 365 aa11.49□□□□□ -0.57
LINC01940-201ENST00000455228 DCTPP1Q9H773 170 aa11.49□□□□□ -0.57
LINC01940-201ENST00000455228 LMBRD1Q9NUN5 540 aa11.49□□□□□ -0.57
LINC01940-201ENST00000455228 STAG3Q9UJ98 1225 aa11.49□□□□□ -0.57
LINC01940-201ENST00000455228 LRCH2Q5VUJ6 765 aa11.48□□□□□ -0.57
LINC01940-201ENST00000455228 SDR16C5Q8N3Y7 309 aa11.48□□□□□ -0.57
LINC01940-201ENST00000455228 PTCH1Q13635 1447 aa11.48□□□□□ -0.57
LINC01940-201ENST00000455228 PNPLA6Q8IY17 1366 aa11.48□□□□□ -0.57
LINC01940-201ENST00000455228 PRIM1P49642 420 aaKnown RBP11.48□□□□□ -0.57
LINC01940-201ENST00000455228 RBSNQ9H1K0 784 aa11.48□□□□□ -0.57
LINC01940-201ENST00000455228 ZFYVE9O95405 1425 aa11.48□□□□□ -0.57
LINC01940-201ENST00000455228 ARHGEF28Q8N1W1 1705 aaKnown RBP11.48□□□□□ -0.57
LINC01940-201ENST00000455228 SLFNL1Q499Z3 407 aa11.48□□□□□ -0.57
LINC01940-201ENST00000455228 ASXL2Q76L83 1435 aa11.47□□□□□ -0.57
LINC01940-201ENST00000455228 ZGPATQ8N5A5 531 aaKnown RBP11.47□□□□□ -0.57
LINC01940-201ENST00000455228 RBM27Q9P2N5 1060 aaKnown RBP11.47□□□□□ -0.57
LINC01940-201ENST00000455228 PIK3R4Q99570 1358 aa11.47□□□□□ -0.57
LINC01940-201ENST00000455228 SDSP20132 328 aa11.47□□□□□ -0.57
LINC01940-201ENST00000455228 NCBP1Q09161 790 aaKnown RBP11.47□□□□□ -0.57
LINC01940-201ENST00000455228 DNAJC21Q5F1R6 531 aaKnown RBP11.47□□□□□ -0.57
LINC01940-201ENST00000455228 EMILIN1Q9Y6C2 1016 aa11.47□□□□□ -0.57
LINC01940-201ENST00000455228 FAM135BQ49AJ0 1406 aa11.47□□□□□ -0.57
LINC01940-201ENST00000455228 LRRC7Q96NW7 1537 aa11.47□□□□□ -0.57
LINC01940-201ENST00000455228 FAM83GA6ND36 823 aa11.46□□□□□ -0.57
LINC01940-201ENST00000455228 SMARCA5O60264 1052 aaPredicted RBP11.46□□□□□ -0.57
LINC01940-201ENST00000455228 OTUD7AQ8TE49 926 aaPredicted RBP11.46□□□□□ -0.57
LINC01940-201ENST00000455228 CALR3Q96L12 384 aaKnown RBP11.46□□□□□ -0.57
LINC01940-201ENST00000455228 SYCE3A1L190 88 aa11.46□□□□□ -0.58
LINC01940-201ENST00000455228 DCTN1Q14203 1278 aa11.46□□□□□ -0.58
LINC01940-201ENST00000455228 SLX1AQ9BQ83 275 aa11.46□□□□□ -0.58
LINC01940-201ENST00000455228 CAMSAP1Q5T5Y3 1602 aa11.46□□□□□ -0.58
LINC01940-201ENST00000455228 IPO7O95373 1038 aaKnown RBP11.45□□□□□ -0.58
LINC01940-201ENST00000455228 FAM163BP0C2L3 166 aa11.45□□□□□ -0.58
LINC01940-201ENST00000455228 RPAP2Q8IXW5 612 aaPredicted RBP11.45□□□□□ -0.58
LINC01940-201ENST00000455228 RNF214Q8ND24 703 aa11.45□□□□□ -0.58
LINC01940-201ENST00000455228 MYO1CO00159 1063 aa11.45□□□□□ -0.58
LINC01940-201ENST00000455228 ANKRD44Q8N8A2 993 aa11.45□□□□□ -0.58
LINC01940-201ENST00000455228 NUB1Q9Y5A7 615 aa11.45□□□□□ -0.58
LINC01940-201ENST00000455228 ERC2O15083 957 aa11.44□□□□□ -0.58
LINC01940-201ENST00000455228 TNNT3P45378 269 aaPredicted RBP11.44□□□□□ -0.58
LINC01940-201ENST00000455228 NEK4P51957 841 aa11.44□□□□□ -0.58
LINC01940-201ENST00000455228 ZNF513Q8N8E2 541 aaPredicted RBP11.44□□□□□ -0.58
LINC01940-201ENST00000455228 JARID2Q92833 1246 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms