RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 USP42Q9H9J4 1324 aaKnown RBP10.9□□□□□ -0.66
NIF3L1-209ENST00000454952 AEBP1Q8IUX7 1158 aa10.9□□□□□ -0.66
NIF3L1-209ENST00000454952 FBXO3Q9UK99 471 aa10.9□□□□□ -0.66
NIF3L1-209ENST00000454952 TJP1Q07157 1748 aa10.89□□□□□ -0.67
NIF3L1-209ENST00000454952 ZPR1O75312 459 aa10.89□□□□□ -0.67
NIF3L1-209ENST00000454952 IL13P35225 146 aa10.89□□□□□ -0.67
NIF3L1-209ENST00000454952 DALRD3Q5D0E6 543 aaKnown RBP10.89□□□□□ -0.67
NIF3L1-209ENST00000454952 VIRMAQ69YN4 1812 aaKnown RBP10.88□□□□□ -0.67
NIF3L1-209ENST00000454952 KDM2BQ8NHM5 1336 aa10.88□□□□□ -0.67
NIF3L1-209ENST00000454952 C16orf71Q8IYS4 520 aaPredicted RBP10.88□□□□□ -0.67
NIF3L1-209ENST00000454952 SLC52A2Q9HAB3 445 aa10.88□□□□□ -0.67
NIF3L1-209ENST00000454952 MRC1P22897 1456 aa10.87□□□□□ -0.67
NIF3L1-209ENST00000454952 C9orf131Q5VYM1 1079 aa10.87□□□□□ -0.67
NIF3L1-209ENST00000454952 INTS5Q6P9B9 1019 aaKnown RBP10.87□□□□□ -0.67
NIF3L1-209ENST00000454952 VSIG10Q8N0Z9 540 aa10.87□□□□□ -0.67
NIF3L1-209ENST00000454952 ZC3H4Q9UPT8 1303 aaKnown RBP10.86□□□□□ -0.67
NIF3L1-209ENST00000454952 KCNA3P22001 575 aa10.86□□□□□ -0.67
NIF3L1-209ENST00000454952 RBM46Q8TBY0 533 aaKnown RBP10.86□□□□□ -0.67
NIF3L1-209ENST00000454952 CCER1Q8TC90 406 aaPredicted RBP10.86□□□□□ -0.67
NIF3L1-209ENST00000454952 SRP68Q9UHB9 627 aaKnown RBP10.86□□□□□ -0.67
NIF3L1-209ENST00000454952 CEP350Q5VT06 3117 aa10.86□□□□□ -0.67
NIF3L1-209ENST00000454952 SOS1Q07889 1333 aaPredicted RBP10.85□□□□□ -0.67
NIF3L1-209ENST00000454952 SBF1O95248 1867 aa10.85□□□□□ -0.67
NIF3L1-209ENST00000454952 POLRMTO00411 1230 aaKnown RBP10.85□□□□□ -0.67
NIF3L1-209ENST00000454952 TM4SF1P30408 202 aa10.85□□□□□ -0.67
NIF3L1-209ENST00000454952 DDR1Q08345 913 aa10.85□□□□□ -0.67
NIF3L1-209ENST00000454952 FSTL1Q12841 308 aa10.85□□□□□ -0.67
NIF3L1-209ENST00000454952 DNAJC10Q8IXB1 793 aa10.85□□□□□ -0.67
NIF3L1-209ENST00000454952 NARFQ9UHQ1 456 aa10.85□□□□□ -0.67
NIF3L1-209ENST00000454952 TNRC6CQ9HCJ0 1690 aaKnown RBP10.85□□□□□ -0.67
NIF3L1-209ENST00000454952 ADAMTS7Q9UKP4 1686 aa10.85□□□□□ -0.67
NIF3L1-209ENST00000454952 A0A087WZG4 1122 aa10.84□□□□□ -0.67
NIF3L1-209ENST00000454952 RNMTO43148 476 aaKnown RBP10.84□□□□□ -0.67
NIF3L1-209ENST00000454952 DIAPH1O60610 1272 aaKnown RBP10.84□□□□□ -0.67
NIF3L1-209ENST00000454952 STARD3NLO95772 234 aa10.84□□□□□ -0.67
NIF3L1-209ENST00000454952 CYP19A1P11511 503 aaPredicted RBP10.84□□□□□ -0.67
NIF3L1-209ENST00000454952 USPL1Q5W0Q7 1092 aa10.84□□□□□ -0.67
NIF3L1-209ENST00000454952 NMRK2Q9NPI5 230 aa10.84□□□□□ -0.67
NIF3L1-209ENST00000454952 RNF181Q9P0P0 153 aa10.84□□□□□ -0.67
NIF3L1-209ENST00000454952 COL15A1P39059 1388 aa10.84□□□□□ -0.67
NIF3L1-209ENST00000454952 AFDNP55196 1824 aaKnown RBP10.84□□□□□ -0.67
NIF3L1-209ENST00000454952 DLEC1Q9Y238 1755 aa10.83□□□□□ -0.68
NIF3L1-209ENST00000454952 TTC5Q8N0Z6 440 aa10.83□□□□□ -0.68
NIF3L1-209ENST00000454952 PDZRN3Q9UPQ7 1066 aa10.83□□□□□ -0.68
NIF3L1-209ENST00000454952 NRXN2Q9P2S2 1712 aa10.83□□□□□ -0.68
NIF3L1-209ENST00000454952 KCPQ6ZWJ8 1503 aa10.83□□□□□ -0.68
NIF3L1-209ENST00000454952 UBR2Q8IWV8 1755 aa10.82□□□□□ -0.68
NIF3L1-209ENST00000454952 WDR90Q96KV7 1748 aa10.82□□□□□ -0.68
NIF3L1-209ENST00000454952 HMOX1P09601 288 aa10.82□□□□□ -0.68
NIF3L1-209ENST00000454952 CHRNA5P30532 468 aa10.82□□□□□ -0.68
NIF3L1-209ENST00000454952 SP7Q8TDD2 431 aaPredicted RBP10.82□□□□□ -0.68
NIF3L1-209ENST00000454952 TEX13AQ9BXU3 409 aaPredicted RBP10.82□□□□□ -0.68
NIF3L1-209ENST00000454952 LGR6Q9HBX8 967 aa10.82□□□□□ -0.68
NIF3L1-209ENST00000454952 NPC1L1Q9UHC9 1359 aa10.81□□□□□ -0.68
NIF3L1-209ENST00000454952 SLC39A6Q13433 755 aa10.81□□□□□ -0.68
NIF3L1-209ENST00000454952 NFIXQ14938 502 aa10.81□□□□□ -0.68
NIF3L1-209ENST00000454952 MTHFSDQ2M296 383 aaKnown RBP10.81□□□□□ -0.68
NIF3L1-209ENST00000454952 NPM2Q86SE8 214 aaKnown RBP10.81□□□□□ -0.68
NIF3L1-209ENST00000454952 TTLL6Q8N841 843 aa10.81□□□□□ -0.68
NIF3L1-209ENST00000454952 GAS2L2Q8NHY3 880 aa10.81□□□□□ -0.68
NIF3L1-209ENST00000454952 KIF7Q2M1P5 1343 aa10.81□□□□□ -0.68
NIF3L1-209ENST00000454952 H0YIN7 160 aa10.8□□□□□ -0.68
NIF3L1-209ENST00000454952 SERPINB2P05120 415 aa10.8□□□□□ -0.68
NIF3L1-209ENST00000454952 LMNB1P20700 586 aa10.8□□□□□ -0.68
NIF3L1-209ENST00000454952 TEFQ10587 303 aa10.8□□□□□ -0.68
NIF3L1-209ENST00000454952 DNAJC5GQ8N7S2 189 aa10.8□□□□□ -0.68
NIF3L1-209ENST00000454952 SMC1BQ8NDV3 1235 aa10.8□□□□□ -0.68
NIF3L1-209ENST00000454952 ZBTB1Q9Y2K1 713 aa10.8□□□□□ -0.68
NIF3L1-209ENST00000454952 GNAT3A8MTJ3 354 aa10.79□□□□□ -0.68
NIF3L1-209ENST00000454952 CANXP27824 592 aaKnown RBP10.79□□□□□ -0.68
NIF3L1-209ENST00000454952 C2CD5Q86YS7 1000 aa10.79□□□□□ -0.68
NIF3L1-209ENST00000454952 CCDC88AQ3V6T2 1871 aa10.78□□□□□ -0.68
NIF3L1-209ENST00000454952 PER1O15534 1290 aaPredicted RBP10.78□□□□□ -0.68
NIF3L1-209ENST00000454952 VEGFAP15692 232 aaPredicted RBP10.78□□□□□ -0.68
NIF3L1-209ENST00000454952 PDE6BP35913 854 aa10.78□□□□□ -0.68
NIF3L1-209ENST00000454952 EIF5P55010 431 aaKnown RBP10.78□□□□□ -0.68
NIF3L1-209ENST00000454952 CC2D1BQ5T0F9 858 aaKnown RBP10.78□□□□□ -0.68
NIF3L1-209ENST00000454952 KLRG1Q96E93 195 aa10.78□□□□□ -0.68
NIF3L1-209ENST00000454952 RRAGCQ9HB90 399 aa10.78□□□□□ -0.68
NIF3L1-209ENST00000454952 CARMIL3Q8ND23 1372 aa10.77□□□□□ -0.68
NIF3L1-209ENST00000454952 HEG1Q9ULI3 1381 aa10.77□□□□□ -0.68
NIF3L1-209ENST00000454952 SIPA1L3O60292 1781 aaPredicted RBP10.77□□□□□ -0.68
NIF3L1-209ENST00000454952 SCN7AQ01118 1682 aa10.77□□□□□ -0.69
NIF3L1-209ENST00000454952 GLTPD2A6NH11 291 aa10.77□□□□□ -0.69
NIF3L1-209ENST00000454952 U2SURPO15042 1029 aaKnown RBP10.77□□□□□ -0.69
NIF3L1-209ENST00000454952 IL6STP40189 918 aaPredicted RBP10.77□□□□□ -0.69
NIF3L1-209ENST00000454952 VASPP50552 380 aaPredicted RBP10.77□□□□□ -0.69
NIF3L1-209ENST00000454952 ZNF790Q6PG37 636 aa10.77□□□□□ -0.69
NIF3L1-209ENST00000454952 CFAP53Q96M91 514 aa10.77□□□□□ -0.69
NIF3L1-209ENST00000454952 FMNL2Q96PY5 1086 aa10.77□□□□□ -0.69
NIF3L1-209ENST00000454952 BRIP1Q9BX63 1249 aa10.77□□□□□ -0.69
NIF3L1-209ENST00000454952 BCL2L12Q9HB09 334 aa10.77□□□□□ -0.69
NIF3L1-209ENST00000454952 TIAM2Q8IVF5 1701 aa10.77□□□□□ -0.69
NIF3L1-209ENST00000454952 DICER1Q9UPY3 1922 aaKnown RBP10.76□□□□□ -0.69
NIF3L1-209ENST00000454952 NPHP1O15259 732 aa10.76□□□□□ -0.69
NIF3L1-209ENST00000454952 SOGA3Q5TF21 947 aa10.76□□□□□ -0.69
NIF3L1-209ENST00000454952 DPY19L2Q6NUT2 758 aa10.76□□□□□ -0.69
NIF3L1-209ENST00000454952 JMYQ8N9B5 988 aa10.76□□□□□ -0.69
NIF3L1-209ENST00000454952 COL3A1P02461 1466 aaPredicted RBP10.75□□□□□ -0.69
NIF3L1-209ENST00000454952 ST5P78524 1137 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms