RNA–Protein interactions for RNA: ENST00000453996.6

CTU2-202, Transcript of cytosolic thiouridylase subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTU2, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-202ENST00000453996 TMOD3Q9NYL9 352 aa26.84■■□□□ 1.89
CTU2-202ENST00000453996 PDZRN3Q9UPQ7 1066 aa26.84■■□□□ 1.89
CTU2-202ENST00000453996 ATP10DQ9P241 1426 aa26.83■■□□□ 1.89
CTU2-202ENST00000453996 ADCY9O60503 1353 aa26.82■■□□□ 1.88
CTU2-202ENST00000453996 PDIA6Q15084 440 aa26.81■■□□□ 1.88
CTU2-202ENST00000453996 UNC5CLQ8IV45 518 aa26.81■■□□□ 1.88
CTU2-202ENST00000453996 CCDC9Q9Y3X0 531 aaKnown RBP26.81■■□□□ 1.88
CTU2-202ENST00000453996 PI4KAP2A4QPH2 592 aa26.81■■□□□ 1.88
CTU2-202ENST00000453996 SIRT2Q8IXJ6 389 aa26.81■■□□□ 1.88
CTU2-202ENST00000453996 PI4KAP1Q8N8J0 262 aa26.81■■□□□ 1.88
CTU2-202ENST00000453996 DNAAF4Q8WXU2 420 aa26.81■■□□□ 1.88
CTU2-202ENST00000453996 C8orf37Q96NL8 207 aa26.81■■□□□ 1.88
CTU2-202ENST00000453996 RBM19Q9Y4C8 960 aaKnown RBP26.81■■□□□ 1.88
CTU2-202ENST00000453996 DOT1LQ8TEK3 1739 aa26.8■■□□□ 1.88
CTU2-202ENST00000453996 NGLY1Q96IV0 654 aa26.8■■□□□ 1.88
CTU2-202ENST00000453996 GNAI3P08754 354 aa26.79■■□□□ 1.88
CTU2-202ENST00000453996 BARGINQ6ZT62 677 aa26.79■■□□□ 1.88
CTU2-202ENST00000453996 USP16Q9Y5T5 823 aa26.79■■□□□ 1.88
CTU2-202ENST00000453996 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.79■■□□□ 1.88
CTU2-202ENST00000453996 BCL9LQ86UU0 1499 aa26.79■■□□□ 1.88
CTU2-202ENST00000453996 DDB1Q16531 1140 aa26.79■■□□□ 1.88
CTU2-202ENST00000453996 RPAP2Q8IXW5 612 aaPredicted RBP26.79■■□□□ 1.88
CTU2-202ENST00000453996 ANKRD44Q8N8A2 993 aa26.79■■□□□ 1.88
CTU2-202ENST00000453996 GCC1Q96CN9 775 aa26.79■■□□□ 1.88
CTU2-202ENST00000453996 SRCIN1Q9C0H9 1055 aa26.79■■□□□ 1.88
CTU2-202ENST00000453996 DDX58O95786 925 aaKnown RBP26.77■■□□□ 1.88
CTU2-202ENST00000453996 CEP85Q6P2H3 762 aa26.77■■□□□ 1.88
CTU2-202ENST00000453996 KSR2Q6VAB6 950 aa26.77■■□□□ 1.88
CTU2-202ENST00000453996 GNAI2P04899 355 aa26.76■■□□□ 1.87
CTU2-202ENST00000453996 PIGBQ92521 554 aa26.76■■□□□ 1.87
CTU2-202ENST00000453996 MYL6BP14649 208 aa26.75■■□□□ 1.87
CTU2-202ENST00000453996 VPS72Q15906 364 aa26.75■■□□□ 1.87
CTU2-202ENST00000453996 BEND3Q5T5X7 828 aa26.75■■□□□ 1.87
CTU2-202ENST00000453996 MAP3K2Q9Y2U5 619 aa26.75■■□□□ 1.87
CTU2-202ENST00000453996 ERBB4Q15303 1308 aa26.75■■□□□ 1.87
CTU2-202ENST00000453996 BCL9O00512 1426 aa26.75■■□□□ 1.87
CTU2-202ENST00000453996 FNBP4Q8N3X1 1017 aaPredicted RBP26.74■■□□□ 1.87
CTU2-202ENST00000453996 PTCD1O75127 700 aaKnown RBP26.74■■□□□ 1.87
CTU2-202ENST00000453996 HSPA1LP34931 641 aa26.74■■□□□ 1.87
CTU2-202ENST00000453996 PDE4AP27815 886 aa26.73■■□□□ 1.87
CTU2-202ENST00000453996 NUCB1Q02818 461 aa26.73■■□□□ 1.87
CTU2-202ENST00000453996 AIMP1Q12904 312 aaKnown RBP26.73■■□□□ 1.87
CTU2-202ENST00000453996 USP44Q9H0E7 712 aa26.72■■□□□ 1.87
CTU2-202ENST00000453996 LRP10Q7Z4F1 713 aa26.71■■□□□ 1.87
CTU2-202ENST00000453996 XAGE3Q8WTP9 111 aa26.71■■□□□ 1.87
CTU2-202ENST00000453996 KAT6BQ8WYB5 2073 aa26.71■■□□□ 1.87
CTU2-202ENST00000453996 UBTFL1P0CB47 393 aaPredicted RBP26.71■■□□□ 1.87
CTU2-202ENST00000453996 HMMRO75330 724 aa26.7■■□□□ 1.86
CTU2-202ENST00000453996 BACH2Q9BYV9 841 aa26.7■■□□□ 1.86
CTU2-202ENST00000453996 ASAP1Q9ULH1 1129 aa26.7■■□□□ 1.86
CTU2-202ENST00000453996 ARFGEF2Q9Y6D5 1785 aa26.7■■□□□ 1.86
CTU2-202ENST00000453996 ALDH1L1O75891 902 aa26.69■■□□□ 1.86
CTU2-202ENST00000453996 ATG3Q9NT62 314 aa26.69■■□□□ 1.86
CTU2-202ENST00000453996 COPS6Q7L5N1 327 aa26.69■■□□□ 1.86
CTU2-202ENST00000453996 RIC3Q7Z5B4 369 aa26.69■■□□□ 1.86
CTU2-202ENST00000453996 CHD1LQ86WJ1 897 aa26.69■■□□□ 1.86
CTU2-202ENST00000453996 DCTPP1Q9H773 170 aa26.69■■□□□ 1.86
CTU2-202ENST00000453996 VSIG10Q8N0Z9 540 aa26.68■■□□□ 1.86
CTU2-202ENST00000453996 USP21Q9UK80 565 aa26.68■■□□□ 1.86
CTU2-202ENST00000453996 PIP4K2AP48426 406 aaPredicted RBP26.67■■□□□ 1.86
CTU2-202ENST00000453996 MARCH10Q8NA82 808 aaPredicted RBP26.67■■□□□ 1.86
CTU2-202ENST00000453996 SYTL4Q96C24 671 aaPredicted RBP26.67■■□□□ 1.86
CTU2-202ENST00000453996 LRRFIP2Q9Y608 721 aaKnown RBP26.67■■□□□ 1.86
CTU2-202ENST00000453996 FAM98CQ17RN3 349 aaKnown RBP26.66■■□□□ 1.86
CTU2-202ENST00000453996 FAM161AQ3B820 660 aa26.66■■□□□ 1.86
CTU2-202ENST00000453996 ANKRD45Q5TZF3 282 aa26.66■■□□□ 1.86
CTU2-202ENST00000453996 MEX3CQ5U5Q3 659 aaKnown RBP26.66■■□□□ 1.86
CTU2-202ENST00000453996 LINS1Q8NG48 757 aa26.66■■□□□ 1.86
CTU2-202ENST00000453996 TEX13AQ9BXU3 409 aaPredicted RBP26.66■■□□□ 1.86
CTU2-202ENST00000453996 LNPKQ9C0E8 428 aa26.66■■□□□ 1.86
CTU2-202ENST00000453996 PRIM1P49642 420 aaKnown RBP26.65■■□□□ 1.86
CTU2-202ENST00000453996 NBPF26B4DH59 902 aa26.64■■□□□ 1.86
CTU2-202ENST00000453996 NBPF14Q5TI25 921 aa26.64■■□□□ 1.86
CTU2-202ENST00000453996 NBPF10Q6P3W6 841 aaKnown RBP26.64■■□□□ 1.86
CTU2-202ENST00000453996 NBPF15Q8N660 670 aa26.64■■□□□ 1.86
CTU2-202ENST00000453996 IBTKQ9P2D0 1353 aaPredicted RBP26.64■■□□□ 1.85
CTU2-202ENST00000453996 NEXNQ0ZGT2 675 aa26.63■■□□□ 1.85
CTU2-202ENST00000453996 ANKRD13DQ6ZTN6 518 aa26.63■■□□□ 1.85
CTU2-202ENST00000453996 NUP188Q5SRE5 1749 aa26.63■■□□□ 1.85
CTU2-202ENST00000453996 THSD7AQ9UPZ6 1657 aa26.63■■□□□ 1.85
CTU2-202ENST00000453996 ATP8B2P98198 1209 aa26.63■■□□□ 1.85
CTU2-202ENST00000453996 RBM42Q9BTD8 480 aaKnown RBP26.63■■□□□ 1.85
CTU2-202ENST00000453996 AFDNP55196 1824 aaKnown RBP26.63■■□□□ 1.85
CTU2-202ENST00000453996 A1BGP04217 495 aa26.62■■□□□ 1.85
CTU2-202ENST00000453996 NBPF7P0C2Y1 421 aaPredicted RBP26.62■■□□□ 1.85
CTU2-202ENST00000453996 CWF19L2Q2TBE0 894 aaKnown RBP26.62■■□□□ 1.85
CTU2-202ENST00000453996 METTL22Q9BUU2 404 aaPredicted RBP26.62■■□□□ 1.85
CTU2-202ENST00000453996 C8orf34Q49A92 452 aa26.61■■□□□ 1.85
CTU2-202ENST00000453996 C9orf78Q9NZ63 289 aaPredicted RBP26.61■■□□□ 1.85
CTU2-202ENST00000453996 TJP1Q07157 1748 aa26.61■■□□□ 1.85
CTU2-202ENST00000453996 DNAJC10Q8IXB1 793 aa26.6■■□□□ 1.85
CTU2-202ENST00000453996 PLBD2Q8NHP8 589 aa26.6■■□□□ 1.85
CTU2-202ENST00000453996 HDAC5Q9UQL6 1122 aa26.6■■□□□ 1.85
CTU2-202ENST00000453996 STARD3NLO95772 234 aa26.58■■□□□ 1.85
CTU2-202ENST00000453996 IGKV5-2P06315 115 aa26.58■■□□□ 1.85
CTU2-202ENST00000453996 MYD88Q99836 296 aa26.58■■□□□ 1.85
CTU2-202ENST00000453996 ZBTB47Q9UFB7 747 aaPredicted RBP26.58■■□□□ 1.85
CTU2-202ENST00000453996 PNMA6EA0A0J9YXQ4 647 aa26.58■■□□□ 1.85
CTU2-202ENST00000453996 ACSBG1Q96GR2 724 aa26.58■■□□□ 1.85
CTU2-202ENST00000453996 NEURL1BA8MQ27 555 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms