RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 PSMD2Q13200 908 aa5.97□□□□□ -1.45
EPHA3-202ENST00000452448 DUSP27Q5VZP5 1158 aa5.97□□□□□ -1.45
EPHA3-202ENST00000452448 GIGYF2Q6Y7W6 1299 aaKnown RBP5.97□□□□□ -1.45
EPHA3-202ENST00000452448 ENOX1Q8TC92 643 aaKnown RBP5.97□□□□□ -1.45
EPHA3-202ENST00000452448 CFAP65Q6ZU64 1925 aaKnown RBP5.97□□□□□ -1.45
EPHA3-202ENST00000452448 IL16Q14005 1332 aa5.97□□□□□ -1.45
EPHA3-202ENST00000452448 AQRO60306 1485 aaKnown RBP eCLIP5.97□□□□□ -1.45
EPHA3-202ENST00000452448 RECKO95980 971 aa5.97□□□□□ -1.45
EPHA3-202ENST00000452448 HDLBPQ00341 1268 aaKnown RBP5.97□□□□□ -1.45
EPHA3-202ENST00000452448 TAGLNQ01995 201 aaKnown RBP5.97□□□□□ -1.45
EPHA3-202ENST00000452448 MECOMQ03112 1051 aa5.97□□□□□ -1.45
EPHA3-202ENST00000452448 ZSCAN26Q16670 478 aa5.97□□□□□ -1.45
EPHA3-202ENST00000452448 AMOTQ4VCS5 1084 aa5.97□□□□□ -1.45
EPHA3-202ENST00000452448 C4orf46Q504U0 113 aa5.97□□□□□ -1.45
EPHA3-202ENST00000452448 FBXO31Q5XUX0 539 aaPredicted RBP5.97□□□□□ -1.45
EPHA3-202ENST00000452448 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.97□□□□□ -1.45
EPHA3-202ENST00000452448 TAF4BQ92750 862 aa5.97□□□□□ -1.45
EPHA3-202ENST00000452448 SEZ6LQ9BYH1 1024 aa5.97□□□□□ -1.45
EPHA3-202ENST00000452448 GNEQ9Y223 722 aaKnown RBP5.97□□□□□ -1.45
EPHA3-202ENST00000452448 FAN1Q9Y2M0 1017 aa5.97□□□□□ -1.45
EPHA3-202ENST00000452448 TMA7Q9Y2S6 64 aaKnown RBP5.97□□□□□ -1.45
EPHA3-202ENST00000452448 SNAPC4Q5SXM2 1469 aa5.97□□□□□ -1.45
EPHA3-202ENST00000452448 SETSIPP0DME0 302 aa5.96□□□□□ -1.45
EPHA3-202ENST00000452448 SPACA7Q96KW9 195 aa5.96□□□□□ -1.45
EPHA3-202ENST00000452448 LZTS2Q9BRK4 669 aa5.96□□□□□ -1.45
EPHA3-202ENST00000452448 RETREG1Q9H6L5 497 aa5.96□□□□□ -1.45
EPHA3-202ENST00000452448 C3orf80F5H4A9 247 aa5.96□□□□□ -1.46
EPHA3-202ENST00000452448 TIMM44O43615 452 aa5.96□□□□□ -1.46
EPHA3-202ENST00000452448 SEC24BO95487 1268 aa5.96□□□□□ -1.46
EPHA3-202ENST00000452448 IGBP1P78318 339 aa5.96□□□□□ -1.46
EPHA3-202ENST00000452448 KIAA2012Q0VF49 1180 aa5.96□□□□□ -1.46
EPHA3-202ENST00000452448 MAP2K5Q13163 448 aa5.96□□□□□ -1.46
EPHA3-202ENST00000452448 PTPROQ16827 1216 aa5.96□□□□□ -1.46
EPHA3-202ENST00000452448 LARP1BQ659C4 914 aaKnown RBP5.96□□□□□ -1.46
EPHA3-202ENST00000452448 IQCF2Q8IXL9 164 aa5.96□□□□□ -1.46
EPHA3-202ENST00000452448 PDILTQ8N807 584 aa5.96□□□□□ -1.46
EPHA3-202ENST00000452448 NEUROD6Q96NK8 337 aa5.96□□□□□ -1.46
EPHA3-202ENST00000452448 NPDC1Q9NQX5 325 aaPredicted RBP5.96□□□□□ -1.46
EPHA3-202ENST00000452448 CALCOCO1Q9P1Z2 691 aa5.96□□□□□ -1.46
EPHA3-202ENST00000452448 CHPF2Q9P2E5 772 aa5.96□□□□□ -1.46
EPHA3-202ENST00000452448 DISP3Q9P2K9 1392 aa5.96□□□□□ -1.46
EPHA3-202ENST00000452448 KIF27Q86VH2 1401 aa5.95□□□□□ -1.46
EPHA3-202ENST00000452448 TGFB3P10600 412 aa5.95□□□□□ -1.46
EPHA3-202ENST00000452448 FAM69CQ0P6D2 419 aa5.95□□□□□ -1.46
EPHA3-202ENST00000452448 MAP9Q49MG5 647 aa5.95□□□□□ -1.46
EPHA3-202ENST00000452448 EGFLAMQ63HQ2 1017 aa5.95□□□□□ -1.46
EPHA3-202ENST00000452448 CDC37L1Q7L3B6 337 aa5.95□□□□□ -1.46
EPHA3-202ENST00000452448 TRIM74Q86UV6 250 aa5.95□□□□□ -1.46
EPHA3-202ENST00000452448 TRIM73Q86UV7 250 aa5.95□□□□□ -1.46
EPHA3-202ENST00000452448 ADAMTS19Q8TE59 1207 aa5.95□□□□□ -1.46
EPHA3-202ENST00000452448 RSPH14Q9UHP6 348 aa5.95□□□□□ -1.46
EPHA3-202ENST00000452448 METRNQ9UJH8 293 aa5.95□□□□□ -1.46
EPHA3-202ENST00000452448 MAP3K1Q13233 1512 aa5.95□□□□□ -1.46
EPHA3-202ENST00000452448 ANKRD18BA2A2Z9 1011 aa5.95□□□□□ -1.46
EPHA3-202ENST00000452448 ANKRD33BA6NCL7 494 aa5.95□□□□□ -1.46
EPHA3-202ENST00000452448 CBFA2T2O43439 604 aa5.95□□□□□ -1.46
EPHA3-202ENST00000452448 OFD1O75665 1012 aa5.95□□□□□ -1.46
EPHA3-202ENST00000452448 KCNA2P16389 499 aa5.95□□□□□ -1.46
EPHA3-202ENST00000452448 PLCG2P16885 1265 aa5.95□□□□□ -1.46
EPHA3-202ENST00000452448 EVA1CP58658 441 aa5.95□□□□□ -1.46
EPHA3-202ENST00000452448 RASA3Q14644 834 aa5.95□□□□□ -1.46
EPHA3-202ENST00000452448 POLR3EQ9NVU0 708 aa5.95□□□□□ -1.46
EPHA3-202ENST00000452448 UQCRHLA0A096LP55 91 aa5.94□□□□□ -1.46
EPHA3-202ENST00000452448 HMMRO75330 724 aa5.94□□□□□ -1.46
EPHA3-202ENST00000452448 PPFIA2O75334 1257 aa5.94□□□□□ -1.46
EPHA3-202ENST00000452448 UQCRHP07919 91 aa5.94□□□□□ -1.46
EPHA3-202ENST00000452448 NBPF7P0C2Y1 421 aaPredicted RBP5.94□□□□□ -1.46
EPHA3-202ENST00000452448 POU5F1Q01860 360 aaKnown RBP5.94□□□□□ -1.46
EPHA3-202ENST00000452448 C9orf131Q5VYM1 1079 aa5.94□□□□□ -1.46
EPHA3-202ENST00000452448 CCDC47Q96A33 483 aaKnown RBP5.94□□□□□ -1.46
EPHA3-202ENST00000452448 DUSP9Q99956 384 aaKnown RBP5.94□□□□□ -1.46
EPHA3-202ENST00000452448 TEX13AQ9BXU3 409 aaPredicted RBP5.94□□□□□ -1.46
EPHA3-202ENST00000452448 INO80BQ9C086 356 aaPredicted RBP5.94□□□□□ -1.46
EPHA3-202ENST00000452448 BIN2Q9UBW5 565 aaPredicted RBP5.94□□□□□ -1.46
EPHA3-202ENST00000452448 EVI5O60447 810 aa5.94□□□□□ -1.46
EPHA3-202ENST00000452448 MAGEA8P43361 318 aa5.94□□□□□ -1.46
EPHA3-202ENST00000452448 EIF5P55010 431 aaKnown RBP5.94□□□□□ -1.46
EPHA3-202ENST00000452448 INHBEP58166 350 aa5.94□□□□□ -1.46
EPHA3-202ENST00000452448 BMS1Q14692 1282 aaKnown RBP5.94□□□□□ -1.46
EPHA3-202ENST00000452448 ZNF394Q53GI3 561 aa5.94□□□□□ -1.46
EPHA3-202ENST00000452448 NLGN1Q8N2Q7 840 aa5.94□□□□□ -1.46
EPHA3-202ENST00000452448 UHMK1Q8TAS1 419 aaKnown RBP5.94□□□□□ -1.46
EPHA3-202ENST00000452448 KIF2CQ99661 725 aa5.94□□□□□ -1.46
EPHA3-202ENST00000452448 TOMM22Q9NS69 142 aa5.94□□□□□ -1.46
EPHA3-202ENST00000452448 DIP2BQ9P265 1576 aa5.94□□□□□ -1.46
EPHA3-202ENST00000452448 CCDC196A0A1B0GTZ2 297 aa5.93□□□□□ -1.46
EPHA3-202ENST00000452448 TLDC2A0PJX2 215 aa5.93□□□□□ -1.46
EPHA3-202ENST00000452448 KIF5CO60282 957 aa5.93□□□□□ -1.46
EPHA3-202ENST00000452448 HSP90B2PQ58FF3 399 aa5.93□□□□□ -1.46
EPHA3-202ENST00000452448 NOP9Q86U38 636 aaKnown RBP5.93□□□□□ -1.46
EPHA3-202ENST00000452448 NPAS4Q8IUM7 802 aa5.93□□□□□ -1.46
EPHA3-202ENST00000452448 SMCR8Q8TEV9 937 aaPredicted RBP5.93□□□□□ -1.46
EPHA3-202ENST00000452448 PAGR1Q9BTK6 254 aa5.93□□□□□ -1.46
EPHA3-202ENST00000452448 TMX1Q9H3N1 280 aa5.93□□□□□ -1.46
EPHA3-202ENST00000452448 RWDD1Q9H446 243 aaPredicted RBP5.93□□□□□ -1.46
EPHA3-202ENST00000452448 UTP6Q9NYH9 597 aaKnown RBP5.93□□□□□ -1.46
EPHA3-202ENST00000452448 ERBB4Q15303 1308 aa5.93□□□□□ -1.46
EPHA3-202ENST00000452448 CCNB3Q8WWL7 1395 aa5.93□□□□□ -1.46
EPHA3-202ENST00000452448 CCDC175P0C221 793 aa5.93□□□□□ -1.46
EPHA3-202ENST00000452448 XBP1P17861 261 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms