RNA–Protein interactions for RNA: ENST00000451653.5

SEC22C-211, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best)

Gene SEC22C, Length 5,955 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-211ENST00000451653 LRRCC1Q9C099 1032 aa9.66□□□□□ -0.86
SEC22C-211ENST00000451653 PRDM11Q9NQV5 511 aa9.66□□□□□ -0.86
SEC22C-211ENST00000451653 GNAT3A8MTJ3 354 aa9.66□□□□□ -0.86
SEC22C-211ENST00000451653 CCT4P50991 539 aaKnown RBP9.66□□□□□ -0.86
SEC22C-211ENST00000451653 NEK4P51957 841 aa9.66□□□□□ -0.86
SEC22C-211ENST00000451653 CHD1LQ86WJ1 897 aa9.66□□□□□ -0.86
SEC22C-211ENST00000451653 SSH1Q8WYL5 1049 aa9.66□□□□□ -0.86
SEC22C-211ENST00000451653 SRCIN1Q9C0H9 1055 aa9.66□□□□□ -0.86
SEC22C-211ENST00000451653 MACROD2A1Z1Q3 448 aa9.66□□□□□ -0.86
SEC22C-211ENST00000451653 LRSAM1Q6UWE0 723 aa9.65□□□□□ -0.86
SEC22C-211ENST00000451653 WASF1Q92558 559 aa9.65□□□□□ -0.86
SEC22C-211ENST00000451653 IL1RAPL2Q9NP60 686 aa9.65□□□□□ -0.86
SEC22C-211ENST00000451653 RARSP54136 660 aaKnown RBP9.65□□□□□ -0.86
SEC22C-211ENST00000451653 GIGYF2Q6Y7W6 1299 aaKnown RBP9.65□□□□□ -0.86
SEC22C-211ENST00000451653 C16orf71Q8IYS4 520 aaPredicted RBP9.65□□□□□ -0.86
SEC22C-211ENST00000451653 ZNF219Q9P2Y4 722 aaPredicted RBP9.65□□□□□ -0.86
SEC22C-211ENST00000451653 FOXO3O43524 673 aa9.65□□□□□ -0.86
SEC22C-211ENST00000451653 UBE4AQ14139 1066 aa9.65□□□□□ -0.86
SEC22C-211ENST00000451653 ZNF354CQ86Y25 554 aa9.65□□□□□ -0.86
SEC22C-211ENST00000451653 TSNARE1Q96NA8 513 aa9.65□□□□□ -0.86
SEC22C-211ENST00000451653 TSG101Q99816 390 aa9.65□□□□□ -0.86
SEC22C-211ENST00000451653 SMC1AQ14683 1233 aaKnown RBP9.65□□□□□ -0.87
SEC22C-211ENST00000451653 CCDC96Q2M329 555 aa9.65□□□□□ -0.87
SEC22C-211ENST00000451653 DUSP27Q5VZP5 1158 aa9.65□□□□□ -0.87
SEC22C-211ENST00000451653 ZNF710Q8N1W2 664 aa9.65□□□□□ -0.87
SEC22C-211ENST00000451653 FERMT1Q9BQL6 677 aa9.65□□□□□ -0.87
SEC22C-211ENST00000451653 TNMDQ9H2S6 317 aa9.65□□□□□ -0.87
SEC22C-211ENST00000451653 ANKIB1Q9P2G1 1089 aa9.65□□□□□ -0.87
SEC22C-211ENST00000451653 DUOX2Q9NRD8 1548 aa9.65□□□□□ -0.87
SEC22C-211ENST00000451653 MBD3O95983 291 aa9.65□□□□□ -0.87
SEC22C-211ENST00000451653 MCM2P49736 904 aa9.65□□□□□ -0.87
SEC22C-211ENST00000451653 MKNK2Q9HBH9 465 aa9.65□□□□□ -0.87
SEC22C-211ENST00000451653 ABCF2Q9UG63 623 aa9.65□□□□□ -0.87
SEC22C-211ENST00000451653 CFAP45Q9UL16 551 aa9.65□□□□□ -0.87
SEC22C-211ENST00000451653 SPATA24Q86W54 205 aa9.64□□□□□ -0.87
SEC22C-211ENST00000451653 MPHOSPH6Q99547 160 aaKnown RBP9.64□□□□□ -0.87
SEC22C-211ENST00000451653 ZNF652Q9Y2D9 606 aa9.64□□□□□ -0.87
SEC22C-211ENST00000451653 SMARCA5O60264 1052 aaPredicted RBP9.64□□□□□ -0.87
SEC22C-211ENST00000451653 AEBP1Q8IUX7 1158 aa9.64□□□□□ -0.87
SEC22C-211ENST00000451653 CTNNA3Q9UI47 895 aa9.64□□□□□ -0.87
SEC22C-211ENST00000451653 CAVIN1Q6NZI2 390 aaKnown RBP9.64□□□□□ -0.87
SEC22C-211ENST00000451653 VPS36Q86VN1 386 aa9.64□□□□□ -0.87
SEC22C-211ENST00000451653 FAM83GA6ND36 823 aa9.64□□□□□ -0.87
SEC22C-211ENST00000451653 CCDC85AQ96PX6 553 aaPredicted RBP9.64□□□□□ -0.87
SEC22C-211ENST00000451653 CEP131Q9UPN4 1083 aa9.64□□□□□ -0.87
SEC22C-211ENST00000451653 SRGAP3O43295 1099 aa9.63□□□□□ -0.87
SEC22C-211ENST00000451653 CAVIN4Q5BKX8 364 aa9.63□□□□□ -0.87
SEC22C-211ENST00000451653 AIDAQ96BJ3 306 aa9.63□□□□□ -0.87
SEC22C-211ENST00000451653 CEP126Q9P2H0 1117 aa9.63□□□□□ -0.87
SEC22C-211ENST00000451653 F6X3S4 739 aa9.63□□□□□ -0.87
SEC22C-211ENST00000451653 IDH1O75874 414 aaKnown RBP9.63□□□□□ -0.87
SEC22C-211ENST00000451653 CCDC148Q8NFR7 591 aa9.63□□□□□ -0.87
SEC22C-211ENST00000451653 GOPCQ9HD26 462 aa9.63□□□□□ -0.87
SEC22C-211ENST00000451653 NKTRP30414 1462 aaKnown RBP9.63□□□□□ -0.87
SEC22C-211ENST00000451653 PBRM1Q86U86 1689 aa9.63□□□□□ -0.87
SEC22C-211ENST00000451653 TCOF1Q13428 1488 aaKnown RBP9.63□□□□□ -0.87
SEC22C-211ENST00000451653 NOP2P46087 812 aaKnown RBP9.63□□□□□ -0.87
SEC22C-211ENST00000451653 GIMAP7Q8NHV1 300 aa9.63□□□□□ -0.87
SEC22C-211ENST00000451653 CCDC192P0DO97 292 aa9.63□□□□□ -0.87
SEC22C-211ENST00000451653 LRRC45Q96CN5 670 aa9.63□□□□□ -0.87
SEC22C-211ENST00000451653 EXOC6BQ9Y2D4 811 aa9.63□□□□□ -0.87
SEC22C-211ENST00000451653 WDR7Q9Y4E6 1490 aa9.63□□□□□ -0.87
SEC22C-211ENST00000451653 PRPF40AO75400 957 aaKnown RBP9.63□□□□□ -0.87
SEC22C-211ENST00000451653 RFX1P22670 979 aa9.63□□□□□ -0.87
SEC22C-211ENST00000451653 ARL1P40616 181 aaPredicted RBP9.63□□□□□ -0.87
SEC22C-211ENST00000451653 SPA17Q15506 151 aa9.63□□□□□ -0.87
SEC22C-211ENST00000451653 CCDC102AQ96A19 550 aa9.63□□□□□ -0.87
SEC22C-211ENST00000451653 ZMYND15Q9H091 742 aa9.63□□□□□ -0.87
SEC22C-211ENST00000451653 MPRIPQ6WCQ1 1025 aa9.62□□□□□ -0.87
SEC22C-211ENST00000451653 NUTM1Q86Y26 1132 aa9.62□□□□□ -0.87
SEC22C-211ENST00000451653 RALGAPBQ86X10 1494 aa9.62□□□□□ -0.87
SEC22C-211ENST00000451653 CCDC178Q5BJE1 867 aa9.62□□□□□ -0.87
SEC22C-211ENST00000451653 MTERF4Q7Z6M4 381 aaKnown RBP9.62□□□□□ -0.87
SEC22C-211ENST00000451653 RAB3IL1Q8TBN0 382 aa9.62□□□□□ -0.87
SEC22C-211ENST00000451653 PHF8Q9UPP1 1060 aa9.62□□□□□ -0.87
SEC22C-211ENST00000451653 PRAG1Q86YV5 1406 aa9.62□□□□□ -0.87
SEC22C-211ENST00000451653 ZWINTO95229 277 aa9.62□□□□□ -0.87
SEC22C-211ENST00000451653 STARD3NLO95772 234 aa9.62□□□□□ -0.87
SEC22C-211ENST00000451653 LMAN1P49257 510 aa9.62□□□□□ -0.87
SEC22C-211ENST00000451653 FKBP15Q5T1M5 1219 aa9.62□□□□□ -0.87
SEC22C-211ENST00000451653 CACNA2D4Q7Z3S7 1137 aa9.62□□□□□ -0.87
SEC22C-211ENST00000451653 DZIP1Q86YF9 867 aaKnown RBP9.62□□□□□ -0.87
SEC22C-211ENST00000451653 RPGRQ92834 1020 aaKnown RBP9.62□□□□□ -0.87
SEC22C-211ENST00000451653 A2MP01023 1474 aa9.62□□□□□ -0.87
SEC22C-211ENST00000451653 USP8P40818 1118 aa9.62□□□□□ -0.87
SEC22C-211ENST00000451653 AACSQ86V21 672 aa9.62□□□□□ -0.87
SEC22C-211ENST00000451653 BCCIPQ9P287 314 aaKnown RBP eCLIP9.61□□□□□ -0.87
SEC22C-211ENST00000451653 CLEC11AQ9Y240 323 aa9.61□□□□□ -0.87
SEC22C-211ENST00000451653 GCOM1H8Y6P7 765 aaPredicted RBP9.61□□□□□ -0.87
SEC22C-211ENST00000451653 MYZAPP0CAP1 466 aa9.61□□□□□ -0.87
SEC22C-211ENST00000451653 IFFO1Q0D2I5 559 aa9.61□□□□□ -0.87
SEC22C-211ENST00000451653 ARHGAP29Q52LW3 1261 aa9.61□□□□□ -0.87
SEC22C-211ENST00000451653 ACEP12821 1306 aa9.61□□□□□ -0.87
SEC22C-211ENST00000451653 PTCD1O75127 700 aaKnown RBP9.61□□□□□ -0.87
SEC22C-211ENST00000451653 SLU7O95391 586 aaKnown RBP9.61□□□□□ -0.87
SEC22C-211ENST00000451653 IMMTQ16891 758 aaKnown RBP9.6□□□□□ -0.87
SEC22C-211ENST00000451653 TRMT1LQ7Z2T5 733 aaKnown RBP9.6□□□□□ -0.87
SEC22C-211ENST00000451653 ZRANB1Q9UGI0 708 aa9.6□□□□□ -0.87
SEC22C-211ENST00000451653 DISP1Q96F81 1524 aa9.6□□□□□ -0.87
SEC22C-211ENST00000451653 KRT85P78386 507 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms