RNA–Protein interactions for RNA: ENST00000450297.1

SPTLC3-204, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 3

Gene SPTLC3, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-204ENST00000450297 USPL1Q5W0Q7 1092 aa13.14□□□□□ -0.31
SPTLC3-204ENST00000450297 CEP350Q5VT06 3117 aa13.14□□□□□ -0.31
SPTLC3-204ENST00000450297 KDM2BQ8NHM5 1336 aa13.13□□□□□ -0.31
SPTLC3-204ENST00000450297 KCNA3P22001 575 aa13.13□□□□□ -0.31
SPTLC3-204ENST00000450297 INTS5Q6P9B9 1019 aaKnown RBP13.13□□□□□ -0.31
SPTLC3-204ENST00000450297 DNAJC10Q8IXB1 793 aa13.13□□□□□ -0.31
SPTLC3-204ENST00000450297 IL13P35225 146 aa13.12□□□□□ -0.31
SPTLC3-204ENST00000450297 AKAP4Q5JQC9 854 aa13.12□□□□□ -0.31
SPTLC3-204ENST00000450297 RBM46Q8TBY0 533 aaKnown RBP13.12□□□□□ -0.31
SPTLC3-204ENST00000450297 C4AP0C0L4 1744 aa13.12□□□□□ -0.31
SPTLC3-204ENST00000450297 CLSPNQ9HAW4 1339 aa13.12□□□□□ -0.31
SPTLC3-204ENST00000450297 HMOX1P09601 288 aa13.11□□□□□ -0.31
SPTLC3-204ENST00000450297 SLC39A6Q13433 755 aa13.11□□□□□ -0.31
SPTLC3-204ENST00000450297 SLC52A2Q9HAB3 445 aa13.11□□□□□ -0.31
SPTLC3-204ENST00000450297 RRAGCQ9HB90 399 aa13.11□□□□□ -0.31
SPTLC3-204ENST00000450297 LGR6Q9HBX8 967 aa13.11□□□□□ -0.31
SPTLC3-204ENST00000450297 N4BP2Q86UW6 1770 aaPredicted RBP13.11□□□□□ -0.31
SPTLC3-204ENST00000450297 POLRMTO00411 1230 aaKnown RBP13.1□□□□□ -0.31
SPTLC3-204ENST00000450297 HTRA3P83110 453 aa13.1□□□□□ -0.31
SPTLC3-204ENST00000450297 CCER1Q8TC90 406 aaPredicted RBP13.1□□□□□ -0.31
SPTLC3-204ENST00000450297 CYP19A1P11511 503 aaPredicted RBP13.09□□□□□ -0.31
SPTLC3-204ENST00000450297 TM4SF1P30408 202 aa13.09□□□□□ -0.31
SPTLC3-204ENST00000450297 CNGB1Q14028 1251 aaPredicted RBP13.09□□□□□ -0.31
SPTLC3-204ENST00000450297 RNMTO43148 476 aaKnown RBP13.08□□□□□ -0.32
SPTLC3-204ENST00000450297 CANXP27824 592 aaKnown RBP13.08□□□□□ -0.32
SPTLC3-204ENST00000450297 FSTL1Q12841 308 aa13.08□□□□□ -0.32
SPTLC3-204ENST00000450297 NFIXQ14938 502 aa13.08□□□□□ -0.32
SPTLC3-204ENST00000450297 BICDL1Q6ZP65 573 aa13.08□□□□□ -0.32
SPTLC3-204ENST00000450297 DNAJC5GQ8N7S2 189 aa13.08□□□□□ -0.32
SPTLC3-204ENST00000450297 NARFQ9UHQ1 456 aa13.08□□□□□ -0.32
SPTLC3-204ENST00000450297 SOS1Q07889 1333 aaPredicted RBP13.08□□□□□ -0.32
SPTLC3-204ENST00000450297 KCPQ6ZWJ8 1503 aa13.08□□□□□ -0.32
SPTLC3-204ENST00000450297 SERPINB2P05120 415 aa13.07□□□□□ -0.32
SPTLC3-204ENST00000450297 RASSF7Q02833 373 aa13.07□□□□□ -0.32
SPTLC3-204ENST00000450297 C2CD5Q86YS7 1000 aa13.07□□□□□ -0.32
SPTLC3-204ENST00000450297 TTC5Q8N0Z6 440 aa13.07□□□□□ -0.32
SPTLC3-204ENST00000450297 ZNF330Q9Y3S2 320 aaPredicted RBP13.07□□□□□ -0.32
SPTLC3-204ENST00000450297 ZNF831Q5JPB2 1677 aa13.06□□□□□ -0.32
SPTLC3-204ENST00000450297 PITPNM1O00562 1244 aa13.06□□□□□ -0.32
SPTLC3-204ENST00000450297 MTHFSDQ2M296 383 aaKnown RBP13.06□□□□□ -0.32
SPTLC3-204ENST00000450297 CC2D1BQ5T0F9 858 aaKnown RBP13.06□□□□□ -0.32
SPTLC3-204ENST00000450297 TTLL6Q8N841 843 aa13.06□□□□□ -0.32
SPTLC3-204ENST00000450297 SMC1BQ8NDV3 1235 aa13.06□□□□□ -0.32
SPTLC3-204ENST00000450297 ZBTB1Q9Y2K1 713 aa13.06□□□□□ -0.32
SPTLC3-204ENST00000450297 KIF13BQ9NQT8 1826 aa13.06□□□□□ -0.32
SPTLC3-204ENST00000450297 COL5A3P25940 1745 aaPredicted RBP13.05□□□□□ -0.32
SPTLC3-204ENST00000450297 KIAA1551Q9HCM1 1747 aa13.05□□□□□ -0.32
SPTLC3-204ENST00000450297 H0YIN7 160 aa13.05□□□□□ -0.32
SPTLC3-204ENST00000450297 NPHP1O15259 732 aa13.05□□□□□ -0.32
SPTLC3-204ENST00000450297 DIAPH1O60610 1272 aaKnown RBP13.05□□□□□ -0.32
SPTLC3-204ENST00000450297 STARD3NLO95772 234 aa13.05□□□□□ -0.32
SPTLC3-204ENST00000450297 LMNB1P20700 586 aa13.05□□□□□ -0.32
SPTLC3-204ENST00000450297 NPM2Q86SE8 214 aaKnown RBP13.05□□□□□ -0.32
SPTLC3-204ENST00000450297 COL15A1P39059 1388 aa13.05□□□□□ -0.32
SPTLC3-204ENST00000450297 A0A087WZG4 1122 aa13.04□□□□□ -0.32
SPTLC3-204ENST00000450297 U2SURPO15042 1029 aaKnown RBP13.04□□□□□ -0.32
SPTLC3-204ENST00000450297 AMER1Q5JTC6 1135 aaPredicted RBP13.04□□□□□ -0.32
SPTLC3-204ENST00000450297 ZNF622Q969S3 477 aaKnown RBP eCLIP13.04□□□□□ -0.32
SPTLC3-204ENST00000450297 KLRG1Q96E93 195 aa13.04□□□□□ -0.32
SPTLC3-204ENST00000450297 SSUH2Q9Y2M2 353 aa13.04□□□□□ -0.32
SPTLC3-204ENST00000450297 VEGFAP15692 232 aaPredicted RBP13.03□□□□□ -0.32
SPTLC3-204ENST00000450297 TEFQ10587 303 aa13.03□□□□□ -0.32
SPTLC3-204ENST00000450297 VSIG10Q8N0Z9 540 aa13.03□□□□□ -0.32
SPTLC3-204ENST00000450297 MYH14Q7Z406 1995 aaKnown RBP13.02□□□□□ -0.32
SPTLC3-204ENST00000450297 BCL2L12Q9HB09 334 aa13.02□□□□□ -0.33
SPTLC3-204ENST00000450297 GLTPD2A6NH11 291 aa13.01□□□□□ -0.33
SPTLC3-204ENST00000450297 CCDC24Q8N4L8 307 aa13.01□□□□□ -0.33
SPTLC3-204ENST00000450297 TBC1D2BQ9UPU7 963 aa13.01□□□□□ -0.33
SPTLC3-204ENST00000450297 ZC3H4Q9UPT8 1303 aaKnown RBP13.01□□□□□ -0.33
SPTLC3-204ENST00000450297 TJP1Q07157 1748 aa13.01□□□□□ -0.33
SPTLC3-204ENST00000450297 KIF7Q2M1P5 1343 aa13□□□□□ -0.33
SPTLC3-204ENST00000450297 C21orf2O43822 256 aa13□□□□□ -0.33
SPTLC3-204ENST00000450297 PDE6BP35913 854 aa13□□□□□ -0.33
SPTLC3-204ENST00000450297 TBC1D9BQ66K14 1250 aa13□□□□□ -0.33
SPTLC3-204ENST00000450297 DPY19L2Q6NUT2 758 aa13□□□□□ -0.33
SPTLC3-204ENST00000450297 TEX13AQ9BXU3 409 aaPredicted RBP13□□□□□ -0.33
SPTLC3-204ENST00000450297 GNAT3A8MTJ3 354 aa12.99□□□□□ -0.33
SPTLC3-204ENST00000450297 EIF5P55010 431 aaKnown RBP12.99□□□□□ -0.33
SPTLC3-204ENST00000450297 COL13A1Q5TAT6 717 aaPredicted RBP12.99□□□□□ -0.33
SPTLC3-204ENST00000450297 JMYQ8N9B5 988 aa12.99□□□□□ -0.33
SPTLC3-204ENST00000450297 GAS2L2Q8NHY3 880 aa12.99□□□□□ -0.33
SPTLC3-204ENST00000450297 ZNF496Q96IT1 587 aaPredicted RBP12.99□□□□□ -0.33
SPTLC3-204ENST00000450297 CARMIL3Q8ND23 1372 aa12.98□□□□□ -0.33
SPTLC3-204ENST00000450297 NFKBIEO00221 500 aa12.98□□□□□ -0.33
SPTLC3-204ENST00000450297 PRELPP51888 382 aa12.98□□□□□ -0.33
SPTLC3-204ENST00000450297 ERFEQ4G0M1 354 aa12.98□□□□□ -0.33
SPTLC3-204ENST00000450297 ZNF790Q6PG37 636 aa12.98□□□□□ -0.33
SPTLC3-204ENST00000450297 TNS4Q8IZW8 715 aa12.98□□□□□ -0.33
SPTLC3-204ENST00000450297 SETDB2Q96T68 719 aa12.98□□□□□ -0.33
SPTLC3-204ENST00000450297 BRIP1Q9BX63 1249 aa12.98□□□□□ -0.33
SPTLC3-204ENST00000450297 MRC1P22897 1456 aa12.97□□□□□ -0.33
SPTLC3-204ENST00000450297 ARFGEF1Q9Y6D6 1849 aa12.97□□□□□ -0.33
SPTLC3-204ENST00000450297 PIP4P2Q8N4L2 257 aa12.97□□□□□ -0.33
SPTLC3-204ENST00000450297 IL17REQ8NFR9 667 aa12.97□□□□□ -0.33
SPTLC3-204ENST00000450297 FMNL2Q96PY5 1086 aa12.97□□□□□ -0.33
SPTLC3-204ENST00000450297 PDZRN3Q9UPQ7 1066 aa12.97□□□□□ -0.33
SPTLC3-204ENST00000450297 SCN11AQ9UI33 1791 aa12.97□□□□□ -0.33
SPTLC3-204ENST00000450297 BRCA1P38398 1863 aaKnown RBP12.96□□□□□ -0.33
SPTLC3-204ENST00000450297 A1BGP04217 495 aa12.96□□□□□ -0.33
SPTLC3-204ENST00000450297 ST5P78524 1137 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms