RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 MS4A4AQ96JQ5 239 aa10.27□□□□□ -0.76
LSM5-208ENST00000450169 CFAP53Q96M91 514 aa10.27□□□□□ -0.76
LSM5-208ENST00000450169 TMX1Q9H3N1 280 aa10.27□□□□□ -0.76
LSM5-208ENST00000450169 SPAG9O60271 1321 aaKnown RBP10.27□□□□□ -0.77
LSM5-208ENST00000450169 TEX35Q5T0J7 233 aa10.27□□□□□ -0.77
LSM5-208ENST00000450169 ICE2Q659A1 982 aa10.27□□□□□ -0.77
LSM5-208ENST00000450169 ZSCAN25Q6NSZ9 544 aa10.27□□□□□ -0.77
LSM5-208ENST00000450169 SYT10Q6XYQ8 523 aa10.27□□□□□ -0.77
LSM5-208ENST00000450169 GTF3C6Q969F1 213 aa10.27□□□□□ -0.77
LSM5-208ENST00000450169 APBB1O00213 710 aa10.26□□□□□ -0.77
LSM5-208ENST00000450169 U2AF1L5P0DN76 240 aaPredicted RBP10.26□□□□□ -0.77
LSM5-208ENST00000450169 CASQ1P31415 396 aa10.26□□□□□ -0.77
LSM5-208ENST00000450169 U2AF1Q01081 240 aaKnown RBP eCLIP10.26□□□□□ -0.77
LSM5-208ENST00000450169 MFSD10Q14728 455 aa10.26□□□□□ -0.77
LSM5-208ENST00000450169 ALDH1L2Q3SY69 923 aa10.26□□□□□ -0.77
LSM5-208ENST00000450169 DHX37Q8IY37 1157 aaKnown RBP10.26□□□□□ -0.77
LSM5-208ENST00000450169 NFATC2IPQ8NCF5 419 aa10.26□□□□□ -0.77
LSM5-208ENST00000450169 NEK11Q8NG66 645 aa10.26□□□□□ -0.77
LSM5-208ENST00000450169 MYCBPQ99417 103 aaPredicted RBP10.26□□□□□ -0.77
LSM5-208ENST00000450169 CRISPLD2Q9H0B8 497 aa10.26□□□□□ -0.77
LSM5-208ENST00000450169 ZFYVE16Q7Z3T8 1539 aa10.26□□□□□ -0.77
LSM5-208ENST00000450169 ERVK-7P63135 1459 aa10.26□□□□□ -0.77
LSM5-208ENST00000450169 MYO1CO00159 1063 aa10.26□□□□□ -0.77
LSM5-208ENST00000450169 HTATSF1O43719 755 aaKnown RBP10.26□□□□□ -0.77
LSM5-208ENST00000450169 SDSP20132 328 aa10.26□□□□□ -0.77
LSM5-208ENST00000450169 MTHFSP49914 203 aa10.26□□□□□ -0.77
LSM5-208ENST00000450169 MLECQ14165 292 aa10.26□□□□□ -0.77
LSM5-208ENST00000450169 C10orf67Q8IYJ2 551 aa10.26□□□□□ -0.77
LSM5-208ENST00000450169 ZNF579Q8NAF0 562 aaKnown RBP10.26□□□□□ -0.77
LSM5-208ENST00000450169 SIRT1Q96EB6 747 aa10.26□□□□□ -0.77
LSM5-208ENST00000450169 POLKQ9UBT6 870 aa10.26□□□□□ -0.77
LSM5-208ENST00000450169 CNPY2Q9Y2B0 182 aa10.26□□□□□ -0.77
LSM5-208ENST00000450169 FANCAO15360 1455 aa10.26□□□□□ -0.77
LSM5-208ENST00000450169 RPAP1Q9BWH6 1393 aaPredicted RBP10.25□□□□□ -0.77
LSM5-208ENST00000450169 DUOX2Q9NRD8 1548 aa10.25□□□□□ -0.77
LSM5-208ENST00000450169 CCDC192P0DO97 292 aa10.25□□□□□ -0.77
LSM5-208ENST00000450169 RNF20Q5VTR2 975 aa10.25□□□□□ -0.77
LSM5-208ENST00000450169 KRBA2Q6ZNG9 492 aa10.25□□□□□ -0.77
LSM5-208ENST00000450169 DRC7Q8IY82 874 aa10.25□□□□□ -0.77
LSM5-208ENST00000450169 NCAPGQ9BPX3 1015 aa10.25□□□□□ -0.77
LSM5-208ENST00000450169 SRCIN1Q9C0H9 1055 aa10.25□□□□□ -0.77
LSM5-208ENST00000450169 FHOD1Q9Y613 1164 aa10.25□□□□□ -0.77
LSM5-208ENST00000450169 PTPRCP08575 1304 aa10.25□□□□□ -0.77
LSM5-208ENST00000450169 IQGAP3Q86VI3 1631 aa10.25□□□□□ -0.77
LSM5-208ENST00000450169 ERC2O15083 957 aa10.24□□□□□ -0.77
LSM5-208ENST00000450169 AFAP1Q8N556 730 aa10.24□□□□□ -0.77
LSM5-208ENST00000450169 BRMS1Q9HCU9 246 aa10.24□□□□□ -0.77
LSM5-208ENST00000450169 IL16Q14005 1332 aa10.24□□□□□ -0.77
LSM5-208ENST00000450169 CCDC171Q6TFL3 1326 aa10.24□□□□□ -0.77
LSM5-208ENST00000450169 NSD3Q9BZ95 1437 aa10.24□□□□□ -0.77
LSM5-208ENST00000450169 H2AFXP16104 143 aaPredicted RBP10.24□□□□□ -0.77
LSM5-208ENST00000450169 NOL8Q76FK4 1167 aaKnown RBP10.24□□□□□ -0.77
LSM5-208ENST00000450169 FAM200AQ8TCP9 573 aa10.24□□□□□ -0.77
LSM5-208ENST00000450169 SLC26A8Q96RN1 970 aa10.24□□□□□ -0.77
LSM5-208ENST00000450169 ATAD2Q6PL18 1390 aa10.24□□□□□ -0.77
LSM5-208ENST00000450169 ERBB3P21860 1342 aa10.24□□□□□ -0.77
LSM5-208ENST00000450169 CD109Q6YHK3 1445 aa10.23□□□□□ -0.77
LSM5-208ENST00000450169 SLU7O95391 586 aaKnown RBP10.23□□□□□ -0.77
LSM5-208ENST00000450169 GYS2P54840 703 aa10.23□□□□□ -0.77
LSM5-208ENST00000450169 NRBP1Q9UHY1 535 aa10.23□□□□□ -0.77
LSM5-208ENST00000450169 TRIM35Q9UPQ4 493 aa10.23□□□□□ -0.77
LSM5-208ENST00000450169 LRRFIP2Q9Y608 721 aaKnown RBP10.23□□□□□ -0.77
LSM5-208ENST00000450169 PIK3R4Q99570 1358 aa10.23□□□□□ -0.77
LSM5-208ENST00000450169 MYOM2P54296 1465 aa10.23□□□□□ -0.77
LSM5-208ENST00000450169 PNMA6AP0CW24 399 aaPredicted RBP10.23□□□□□ -0.77
LSM5-208ENST00000450169 TPM4P67936 248 aa10.23□□□□□ -0.77
LSM5-208ENST00000450169 PTPN14Q15678 1187 aa10.23□□□□□ -0.77
LSM5-208ENST00000450169 C16orf71Q8IYS4 520 aaPredicted RBP10.23□□□□□ -0.77
LSM5-208ENST00000450169 CCDC191Q8NCU4 936 aa10.23□□□□□ -0.77
LSM5-208ENST00000450169 ZNF622Q969S3 477 aaKnown RBP eCLIP10.23□□□□□ -0.779e-7■□□□□ 9.3
LSM5-208ENST00000450169 CWC15Q9P013 229 aaKnown RBP10.23□□□□□ -0.77
LSM5-208ENST00000450169 TCHHQ07283 1943 aa10.23□□□□□ -0.77
LSM5-208ENST00000450169 GUCY2CP25092 1073 aa10.22□□□□□ -0.77
LSM5-208ENST00000450169 TMPOP42166 694 aaKnown RBP10.22□□□□□ -0.77
LSM5-208ENST00000450169 PLA2G4AP47712 749 aa10.22□□□□□ -0.77
LSM5-208ENST00000450169 ZSCAN26Q16670 478 aa10.22□□□□□ -0.77
LSM5-208ENST00000450169 NYAP1Q6ZVC0 841 aa10.22□□□□□ -0.77
LSM5-208ENST00000450169 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.22□□□□□ -0.77
LSM5-208ENST00000450169 LCMT1Q9UIC8 334 aa10.22□□□□□ -0.77
LSM5-208ENST00000450169 RTL1A6NKG5 1358 aa10.22□□□□□ -0.77
LSM5-208ENST00000450169 INO80Q9ULG1 1556 aaPredicted RBP10.22□□□□□ -0.77
LSM5-208ENST00000450169 RAD50Q92878 1312 aa10.22□□□□□ -0.77
LSM5-208ENST00000450169 GPS2Q13227 327 aa10.22□□□□□ -0.77
LSM5-208ENST00000450169 CAMK2BQ13554 666 aa10.22□□□□□ -0.77
LSM5-208ENST00000450169 GOLGA6L1Q8N7Z2 621 aa10.22□□□□□ -0.77
LSM5-208ENST00000450169 CACTINQ8WUQ7 758 aaKnown RBP10.22□□□□□ -0.77
LSM5-208ENST00000450169 ATG3Q9NT62 314 aa10.22□□□□□ -0.77
LSM5-208ENST00000450169 SPHKAPQ2M3C7 1700 aa10.22□□□□□ -0.77
LSM5-208ENST00000450169 PLEKHG3A1L390 1219 aa10.21□□□□□ -0.77
LSM5-208ENST00000450169 NPHP1O15259 732 aa10.21□□□□□ -0.77
LSM5-208ENST00000450169 POLR3GO15318 223 aaPredicted RBP10.21□□□□□ -0.77
LSM5-208ENST00000450169 MAP3K13O43283 966 aa10.21□□□□□ -0.77
LSM5-208ENST00000450169 FIBPO43427 364 aa10.21□□□□□ -0.77
LSM5-208ENST00000450169 CLCN6P51797 869 aa10.21□□□□□ -0.77
LSM5-208ENST00000450169 LMOD3Q0VAK6 560 aa10.21□□□□□ -0.77
LSM5-208ENST00000450169 LUZP1Q86V48 1076 aa10.21□□□□□ -0.77
LSM5-208ENST00000450169 OTUD7AQ8TE49 926 aaPredicted RBP10.21□□□□□ -0.77
LSM5-208ENST00000450169 TRIM5Q9C035 493 aa10.21□□□□□ -0.77
LSM5-208ENST00000450169 DCTPP1Q9H773 170 aa10.21□□□□□ -0.77
LSM5-208ENST00000450169 ARIH1Q9Y4X5 557 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms