RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 CFAP53Q96M91 514 aa23.55■■□□□ 1.36
FAM3A-216ENST00000449971 ZNF831Q5JPB2 1677 aa23.54■■□□□ 1.36
FAM3A-216ENST00000449971 ZPR1O75312 459 aa23.53■■□□□ 1.36
FAM3A-216ENST00000449971 PPP2R1AP30153 589 aa23.53■■□□□ 1.36
FAM3A-216ENST00000449971 USPL1Q5W0Q7 1092 aa23.53■■□□□ 1.36
FAM3A-216ENST00000449971 POLRMTO00411 1230 aaKnown RBP23.52■■□□□ 1.36
FAM3A-216ENST00000449971 AKAP4Q5JQC9 854 aa23.51■■□□□ 1.35
FAM3A-216ENST00000449971 INTS5Q6P9B9 1019 aaKnown RBP23.51■■□□□ 1.35
FAM3A-216ENST00000449971 DNAJC10Q8IXB1 793 aa23.51■■□□□ 1.35
FAM3A-216ENST00000449971 JMYQ8N9B5 988 aa23.51■■□□□ 1.35
FAM3A-216ENST00000449971 SMC1BQ8NDV3 1235 aa23.51■■□□□ 1.35
FAM3A-216ENST00000449971 TNS4Q8IZW8 715 aa23.5■■□□□ 1.35
FAM3A-216ENST00000449971 TM4SF1P30408 202 aa23.48■■□□□ 1.35
FAM3A-216ENST00000449971 MTHFSDQ2M296 383 aaKnown RBP23.48■■□□□ 1.35
FAM3A-216ENST00000449971 COL3A1P02461 1466 aaPredicted RBP23.48■■□□□ 1.35
FAM3A-216ENST00000449971 NUDCQ9Y266 331 aa23.47■■□□□ 1.35
FAM3A-216ENST00000449971 TJP1Q07157 1748 aa23.46■■□□□ 1.35
FAM3A-216ENST00000449971 LGR6Q9HBX8 967 aa23.46■■□□□ 1.35
FAM3A-216ENST00000449971 SBF1O95248 1867 aa23.45■■□□□ 1.35
FAM3A-216ENST00000449971 SLC39A6Q13433 755 aa23.45■■□□□ 1.34
FAM3A-216ENST00000449971 NFIXQ14938 502 aa23.45■■□□□ 1.34
FAM3A-216ENST00000449971 TNRC6CQ9HCJ0 1690 aaKnown RBP23.44■■□□□ 1.34
FAM3A-216ENST00000449971 SOS1Q07889 1333 aaPredicted RBP23.44■■□□□ 1.34
FAM3A-216ENST00000449971 LMNB1P20700 586 aa23.44■■□□□ 1.34
FAM3A-216ENST00000449971 DDX10Q13206 875 aaKnown RBP23.44■■□□□ 1.34
FAM3A-216ENST00000449971 RNMTO43148 476 aaKnown RBP23.43■■□□□ 1.34
FAM3A-216ENST00000449971 U2AF1L5P0DN76 240 aaPredicted RBP23.42■■□□□ 1.34
FAM3A-216ENST00000449971 VEGFAP15692 232 aaPredicted RBP23.42■■□□□ 1.34
FAM3A-216ENST00000449971 PRELPP51888 382 aa23.42■■□□□ 1.34
FAM3A-216ENST00000449971 U2AF1Q01081 240 aaKnown RBP eCLIP23.42■■□□□ 1.34
FAM3A-216ENST00000449971 BICDL1Q6ZP65 573 aa23.42■■□□□ 1.34
FAM3A-216ENST00000449971 C2CD5Q86YS7 1000 aa23.42■■□□□ 1.34
FAM3A-216ENST00000449971 ZNF219Q9P2Y4 722 aaPredicted RBP23.42■■□□□ 1.34
FAM3A-216ENST00000449971 GLTPD2A6NH11 291 aa23.41■■□□□ 1.34
FAM3A-216ENST00000449971 SERPINB2P05120 415 aa23.41■■□□□ 1.34
FAM3A-216ENST00000449971 HSPA1AP0DMV8 641 aaKnown RBP23.41■■□□□ 1.34
FAM3A-216ENST00000449971 HSPA1BP0DMV9 641 aaKnown RBP23.41■■□□□ 1.34
FAM3A-216ENST00000449971 CYP19A1P11511 503 aaPredicted RBP23.41■■□□□ 1.34
FAM3A-216ENST00000449971 TTLL6Q8N841 843 aa23.41■■□□□ 1.34
FAM3A-216ENST00000449971 SLC52A2Q9HAB3 445 aa23.41■■□□□ 1.34
FAM3A-216ENST00000449971 ZBTB1Q9Y2K1 713 aa23.41■■□□□ 1.34
FAM3A-216ENST00000449971 PRKAR2BP31323 418 aa23.4■■□□□ 1.34
FAM3A-216ENST00000449971 GAS2L2Q8NHY3 880 aa23.4■■□□□ 1.34
FAM3A-216ENST00000449971 NARFQ9UHQ1 456 aa23.4■■□□□ 1.34
FAM3A-216ENST00000449971 COL15A1P39059 1388 aa23.4■■□□□ 1.34
FAM3A-216ENST00000449971 CANXP27824 592 aaKnown RBP23.39■■□□□ 1.33
FAM3A-216ENST00000449971 PHACTR3Q96KR7 559 aa23.38■■□□□ 1.33
FAM3A-216ENST00000449971 RSPH6AQ9H0K4 717 aa23.38■■□□□ 1.33
FAM3A-216ENST00000449971 ADAMTS7Q9UKP4 1686 aa23.38■■□□□ 1.33
FAM3A-216ENST00000449971 ZC3H4Q9UPT8 1303 aaKnown RBP23.37■■□□□ 1.33
FAM3A-216ENST00000449971 GNAT3A8MTJ3 354 aa23.37■■□□□ 1.33
FAM3A-216ENST00000449971 H0YIN7 160 aa23.37■■□□□ 1.33
FAM3A-216ENST00000449971 ZNF622Q969S3 477 aaKnown RBP eCLIP23.37■■□□□ 1.33
FAM3A-216ENST00000449971 BCL2L12Q9HB09 334 aa23.37■■□□□ 1.33
FAM3A-216ENST00000449971 AFDNP55196 1824 aaKnown RBP23.37■■□□□ 1.33
FAM3A-216ENST00000449971 CARMIL3Q8ND23 1372 aa23.37■■□□□ 1.33
FAM3A-216ENST00000449971 SCN11AQ9UI33 1791 aa23.37■■□□□ 1.33
FAM3A-216ENST00000449971 NFKBIEO00221 500 aa23.36■■□□□ 1.33
FAM3A-216ENST00000449971 ZEB1P37275 1124 aaPredicted RBP23.36■■□□□ 1.33
FAM3A-216ENST00000449971 CCDC24Q8N4L8 307 aa23.36■■□□□ 1.33
FAM3A-216ENST00000449971 ZNF330Q9Y3S2 320 aaPredicted RBP23.36■■□□□ 1.33
FAM3A-216ENST00000449971 CCDC88AQ3V6T2 1871 aa23.33■■□□□ 1.33
FAM3A-216ENST00000449971 RALBP1Q15311 655 aa23.33■■□□□ 1.33
FAM3A-216ENST00000449971 IL17REQ8NFR9 667 aa23.33■■□□□ 1.33
FAM3A-216ENST00000449971 C21orf2O43822 256 aa23.32■■□□□ 1.32
FAM3A-216ENST00000449971 TEFQ10587 303 aa23.32■■□□□ 1.32
FAM3A-216ENST00000449971 DPY19L2Q6NUT2 758 aa23.32■■□□□ 1.32
FAM3A-216ENST00000449971 TIAM2Q8IVF5 1701 aa23.31■■□□□ 1.32
FAM3A-216ENST00000449971 ERFEQ4G0M1 354 aa23.31■■□□□ 1.32
FAM3A-216ENST00000449971 POTECB2RU33 542 aa23.3■■□□□ 1.32
FAM3A-216ENST00000449971 TBC1D9BQ66K14 1250 aa23.3■■□□□ 1.32
FAM3A-216ENST00000449971 MKRN1Q9UHC7 482 aaKnown RBP23.3■■□□□ 1.32
FAM3A-216ENST00000449971 NPHP1O15259 732 aa23.29■■□□□ 1.32
FAM3A-216ENST00000449971 NRXN2Q9P2S2 1712 aa23.28■■□□□ 1.32
FAM3A-216ENST00000449971 STARD3NLO95772 234 aa23.28■■□□□ 1.32
FAM3A-216ENST00000449971 TTC5Q8N0Z6 440 aa23.28■■□□□ 1.32
FAM3A-216ENST00000449971 DLEC1Q9Y238 1755 aa23.27■■□□□ 1.32
FAM3A-216ENST00000449971 NEFMP07197 916 aa23.27■■□□□ 1.32
FAM3A-216ENST00000449971 RTF1Q92541 710 aaKnown RBP23.27■■□□□ 1.32
FAM3A-216ENST00000449971 TBC1D2BQ9UPU7 963 aa23.27■■□□□ 1.32
FAM3A-216ENST00000449971 MRC1P22897 1456 aa23.27■■□□□ 1.32
FAM3A-216ENST00000449971 A0A087WZG4 1122 aa23.25■■□□□ 1.31
FAM3A-216ENST00000449971 VSIG10Q8N0Z9 540 aa23.25■■□□□ 1.31
FAM3A-216ENST00000449971 DDNO94850 711 aaPredicted RBP23.24■■□□□ 1.31
FAM3A-216ENST00000449971 POTEIP0CG38 1075 aa23.24■■□□□ 1.31
FAM3A-216ENST00000449971 POTEJP0CG39 1038 aa23.24■■□□□ 1.31
FAM3A-216ENST00000449971 PDE6BP35913 854 aa23.24■■□□□ 1.31
FAM3A-216ENST00000449971 EIF5P55010 431 aaKnown RBP23.24■■□□□ 1.31
FAM3A-216ENST00000449971 PRR5LQ6MZQ0 368 aa23.23■■□□□ 1.31
FAM3A-216ENST00000449971 CHADLQ6NUI6 762 aa23.23■■□□□ 1.31
FAM3A-216ENST00000449971 MCM10Q7L590 875 aa23.23■■□□□ 1.31
FAM3A-216ENST00000449971 BRIP1Q9BX63 1249 aa23.23■■□□□ 1.31
FAM3A-216ENST00000449971 TAOK3Q9H2K8 898 aa23.23■■□□□ 1.31
FAM3A-216ENST00000449971 VIRMAQ69YN4 1812 aaKnown RBP23.23■■□□□ 1.31
FAM3A-216ENST00000449971 ZNF790Q6PG37 636 aa23.22■■□□□ 1.31
FAM3A-216ENST00000449971 PNNQ9H307 717 aaKnown RBP23.22■■□□□ 1.31
FAM3A-216ENST00000449971 MYBBP1AQ9BQG0 1328 aaKnown RBP23.22■■□□□ 1.31
FAM3A-216ENST00000449971 CEMIPQ8WUJ3 1361 aa23.22■■□□□ 1.31
FAM3A-216ENST00000449971 BTBD11A6QL63 1104 aa23.21■■□□□ 1.31
FAM3A-216ENST00000449971 DCTN1Q14203 1278 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms