RNA–Protein interactions for RNA: ENST00000449911.2

SSU72P1-201, Transcript of SSU72 pseudogene 1, humanhuman

BASIC

Gene SSU72P1, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72P1-201ENST00000449911 ATG3Q9NT62 314 aa12.66□□□□□ -0.38
SSU72P1-201ENST00000449911 C5P01031 1676 aa12.66□□□□□ -0.38
SSU72P1-201ENST00000449911 LRP5O75197 1615 aa12.66□□□□□ -0.38
SSU72P1-201ENST00000449911 ATP6V1AP38606 617 aa12.65□□□□□ -0.38
SSU72P1-201ENST00000449911 ZNF827Q17R98 1081 aa12.65□□□□□ -0.38
SSU72P1-201ENST00000449911 PHACTR3Q96KR7 559 aa12.65□□□□□ -0.38
SSU72P1-201ENST00000449911 AK7Q96M32 723 aa12.65□□□□□ -0.38
SSU72P1-201ENST00000449911 LGR6Q9HBX8 967 aa12.65□□□□□ -0.38
SSU72P1-201ENST00000449911 SRCAPQ6ZRS2 3230 aa12.65□□□□□ -0.38
SSU72P1-201ENST00000449911 ADAMTS7Q9UKP4 1686 aa12.64□□□□□ -0.39
SSU72P1-201ENST00000449911 TTC5Q8N0Z6 440 aa12.64□□□□□ -0.39
SSU72P1-201ENST00000449911 SPON1Q9HCB6 807 aa12.64□□□□□ -0.39
SSU72P1-201ENST00000449911 POTEFA5A3E0 1075 aa12.63□□□□□ -0.39
SSU72P1-201ENST00000449911 CASZ1Q86V15 1759 aa12.63□□□□□ -0.39
SSU72P1-201ENST00000449911 C4BP0C0L5 1744 aa12.62□□□□□ -0.39
SSU72P1-201ENST00000449911 HTATSF1O43719 755 aaKnown RBP12.62□□□□□ -0.39
SSU72P1-201ENST00000449911 PTCD1O75127 700 aaKnown RBP12.62□□□□□ -0.39
SSU72P1-201ENST00000449911 MAMSTRQ6ZN01 415 aa12.62□□□□□ -0.39
SSU72P1-201ENST00000449911 KLHL34Q8N239 644 aa12.62□□□□□ -0.39
SSU72P1-201ENST00000449911 FLAD1Q8NFF5 587 aa12.62□□□□□ -0.39
SSU72P1-201ENST00000449911 QSER1Q2KHR3 1735 aa12.62□□□□□ -0.39
SSU72P1-201ENST00000449911 ZNF831Q5JPB2 1677 aa12.61□□□□□ -0.39
SSU72P1-201ENST00000449911 CEMIPQ8WUJ3 1361 aa12.61□□□□□ -0.39
SSU72P1-201ENST00000449911 ZBTB7AO95365 584 aa12.61□□□□□ -0.39
SSU72P1-201ENST00000449911 NFE2L2Q16236 605 aa12.61□□□□□ -0.39
SSU72P1-201ENST00000449911 IL17REQ8NFR9 667 aa12.61□□□□□ -0.39
SSU72P1-201ENST00000449911 PLEKHF1Q96S99 279 aa12.61□□□□□ -0.39
SSU72P1-201ENST00000449911 MTFR1LQ9H019 292 aa12.61□□□□□ -0.39
SSU72P1-201ENST00000449911 PPP1R1BQ9UD71 204 aaPredicted RBP12.61□□□□□ -0.39
SSU72P1-201ENST00000449911 TRIM35Q9UPQ4 493 aa12.61□□□□□ -0.39
SSU72P1-201ENST00000449911 VIRMAQ69YN4 1812 aaKnown RBP12.6□□□□□ -0.39
SSU72P1-201ENST00000449911 TAF1LQ8IZX4 1826 aa12.6□□□□□ -0.39
SSU72P1-201ENST00000449911 LMOD3Q0VAK6 560 aa12.6□□□□□ -0.39
SSU72P1-201ENST00000449911 LINC00116Q8NCU8 138 aa12.6□□□□□ -0.39
SSU72P1-201ENST00000449911 SLC16A10Q8TF71 515 aa12.6□□□□□ -0.39
SSU72P1-201ENST00000449911 PNPLA7Q6ZV29 1317 aa12.6□□□□□ -0.39
SSU72P1-201ENST00000449911 BTBD11A6QL63 1104 aa12.59□□□□□ -0.39
SSU72P1-201ENST00000449911 GNPATO15228 680 aa12.59□□□□□ -0.39
SSU72P1-201ENST00000449911 PYGBP11216 843 aa12.59□□□□□ -0.39
SSU72P1-201ENST00000449911 SSFA2P28290 1259 aa12.59□□□□□ -0.39
SSU72P1-201ENST00000449911 SLC39A6Q13433 755 aa12.59□□□□□ -0.39
SSU72P1-201ENST00000449911 ITPK1Q13572 414 aa12.59□□□□□ -0.39
SSU72P1-201ENST00000449911 IER5LQ5T953 404 aa12.59□□□□□ -0.39
SSU72P1-201ENST00000449911 MCM10Q7L590 875 aa12.59□□□□□ -0.39
SSU72P1-201ENST00000449911 PHF14O94880 888 aa12.58□□□□□ -0.4
SSU72P1-201ENST00000449911 POLD1P28340 1107 aa12.58□□□□□ -0.4
SSU72P1-201ENST00000449911 VSIG10Q8N0Z9 540 aa12.58□□□□□ -0.4
SSU72P1-201ENST00000449911 RUNDC1Q96C34 613 aa12.58□□□□□ -0.4
SSU72P1-201ENST00000449911 PDGFDQ9GZP0 370 aaPredicted RBP12.58□□□□□ -0.4
SSU72P1-201ENST00000449911 CNTNAP4Q9C0A0 1308 aa12.58□□□□□ -0.4
SSU72P1-201ENST00000449911 TUBGCP6Q96RT7 1819 aa12.58□□□□□ -0.4
SSU72P1-201ENST00000449911 KCPQ6ZWJ8 1503 aa12.57□□□□□ -0.4
SSU72P1-201ENST00000449911 RC3H1Q5TC82 1133 aaKnown RBP12.57□□□□□ -0.4
SSU72P1-201ENST00000449911 ZNF790Q6PG37 636 aa12.57□□□□□ -0.4
SSU72P1-201ENST00000449911 CCDC146Q8IYE0 955 aa12.57□□□□□ -0.4
SSU72P1-201ENST00000449911 FMNL2Q96PY5 1086 aa12.57□□□□□ -0.4
SSU72P1-201ENST00000449911 SLC4A9Q96Q91 983 aa12.57□□□□□ -0.4
SSU72P1-201ENST00000449911 TMEM106CQ9BVX2 250 aa12.57□□□□□ -0.4
SSU72P1-201ENST00000449911 MRS2Q9HD23 443 aa12.57□□□□□ -0.4
SSU72P1-201ENST00000449911 ADAMTS8Q9UP79 889 aa12.57□□□□□ -0.4
SSU72P1-201ENST00000449911 COLQQ9Y215 455 aaPredicted RBP12.57□□□□□ -0.4
SSU72P1-201ENST00000449911 RTCBQ9Y3I0 505 aaKnown RBP12.57□□□□□ -0.4
SSU72P1-201ENST00000449911 CICQ96RK0 1608 aaPredicted RBP12.57□□□□□ -0.4
SSU72P1-201ENST00000449911 COL5A3P25940 1745 aaPredicted RBP12.57□□□□□ -0.4
SSU72P1-201ENST00000449911 SIPA1L3O60292 1781 aaPredicted RBP12.56□□□□□ -0.4
SSU72P1-201ENST00000449911 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.56□□□□□ -0.4
SSU72P1-201ENST00000449911 RIPK4P57078 832 aa12.56□□□□□ -0.4
SSU72P1-201ENST00000449911 DCTN1Q14203 1278 aa12.56□□□□□ -0.4
SSU72P1-201ENST00000449911 COL23A1Q86Y22 540 aaPredicted RBP12.56□□□□□ -0.4
SSU72P1-201ENST00000449911 PNISRQ8TF01 805 aaKnown RBP12.56□□□□□ -0.4
SSU72P1-201ENST00000449911 TJP1Q07157 1748 aa12.55□□□□□ -0.4
SSU72P1-201ENST00000449911 SEC24BO95487 1268 aa12.55□□□□□ -0.4
SSU72P1-201ENST00000449911 STARD3NLO95772 234 aa12.55□□□□□ -0.4
SSU72P1-201ENST00000449911 CRKLP46109 303 aaKnown RBP12.55□□□□□ -0.4
SSU72P1-201ENST00000449911 GSE1Q14687 1217 aa12.55□□□□□ -0.4
SSU72P1-201ENST00000449911 TAF7Q15545 349 aaPredicted RBP12.55□□□□□ -0.4
SSU72P1-201ENST00000449911 TEX13AQ9BXU3 409 aaPredicted RBP12.55□□□□□ -0.4
SSU72P1-201ENST00000449911 SCUBE2Q9NQ36 999 aa12.55□□□□□ -0.4
SSU72P1-201ENST00000449911 UBR2Q8IWV8 1755 aa12.55□□□□□ -0.4
SSU72P1-201ENST00000449911 HEG1Q9ULI3 1381 aa12.55□□□□□ -0.4
SSU72P1-201ENST00000449911 TMPOP42166 694 aaKnown RBP12.54□□□□□ -0.4
SSU72P1-201ENST00000449911 NEUROD2Q15784 382 aa12.54□□□□□ -0.4
SSU72P1-201ENST00000449911 TRAPPC3LQ5T215 181 aa12.54□□□□□ -0.4
SSU72P1-201ENST00000449911 DNAJC10Q8IXB1 793 aa12.54□□□□□ -0.4
SSU72P1-201ENST00000449911 UBR3Q6ZT12 1888 aa12.54□□□□□ -0.4
SSU72P1-201ENST00000449911 DLG5Q8TDM6 1919 aa12.53□□□□□ -0.4
SSU72P1-201ENST00000449911 RPS6KA4O75676 772 aa12.53□□□□□ -0.4
SSU72P1-201ENST00000449911 RFC4P35249 363 aa12.53□□□□□ -0.4
SSU72P1-201ENST00000449911 NPM2Q86SE8 214 aaKnown RBP12.53□□□□□ -0.4
SSU72P1-201ENST00000449911 ZNF496Q96IT1 587 aaPredicted RBP12.53□□□□□ -0.4
SSU72P1-201ENST00000449911 CCDC87Q9NVE4 849 aa12.53□□□□□ -0.4
SSU72P1-201ENST00000449911 PTGER2P43116 358 aa12.52□□□□□ -0.41
SSU72P1-201ENST00000449911 MSL1Q68DK7 614 aa12.52□□□□□ -0.41
SSU72P1-201ENST00000449911 ARXQ96QS3 562 aa12.52□□□□□ -0.41
SSU72P1-201ENST00000449911 RRP7AQ9Y3A4 280 aaKnown RBP12.52□□□□□ -0.41
SSU72P1-201ENST00000449911 CYP19A1P11511 503 aaPredicted RBP12.51□□□□□ -0.41
SSU72P1-201ENST00000449911 THUMPD2Q9BTF0 503 aaKnown RBP12.51□□□□□ -0.41
SSU72P1-201ENST00000449911 SNRPA1P09661 255 aaKnown RBP12.5□□□□□ -0.41
SSU72P1-201ENST00000449911 CALD1Q05682 793 aaKnown RBP12.5□□□□□ -0.41
SSU72P1-201ENST00000449911 AMIGO3Q86WK7 504 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms