RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.46□□□□□ -1.05
BEST1-202ENST00000449131 IPO7O95373 1038 aaKnown RBP8.46□□□□□ -1.06
BEST1-202ENST00000449131 PDE1AP54750 535 aa8.46□□□□□ -1.06
BEST1-202ENST00000449131 LIMCH1Q9UPQ0 1083 aa8.46□□□□□ -1.06
BEST1-202ENST00000449131 PLA2R1Q13018 1463 aa8.46□□□□□ -1.06
BEST1-202ENST00000449131 XBP1P17861 261 aa8.46□□□□□ -1.06
BEST1-202ENST00000449131 BRD2P25440 801 aaKnown RBP8.46□□□□□ -1.06
BEST1-202ENST00000449131 MNS1Q8NEH6 495 aa8.46□□□□□ -1.06
BEST1-202ENST00000449131 CCDC47Q96A33 483 aaKnown RBP8.46□□□□□ -1.06
BEST1-202ENST00000449131 ECHDC1Q9NTX5 307 aa8.46□□□□□ -1.06
BEST1-202ENST00000449131 MAP3K2Q9Y2U5 619 aa8.46□□□□□ -1.06
BEST1-202ENST00000449131 MYO5CQ9NQX4 1742 aa8.45□□□□□ -1.06
BEST1-202ENST00000449131 HMGN5P82970 282 aaKnown RBP8.45□□□□□ -1.06
BEST1-202ENST00000449131 CFAP45Q9UL16 551 aa8.45□□□□□ -1.06
BEST1-202ENST00000449131 UGGT1Q9NYU2 1555 aa8.45□□□□□ -1.06
BEST1-202ENST00000449131 MTHFSDQ2M296 383 aaKnown RBP8.45□□□□□ -1.06
BEST1-202ENST00000449131 RHPN1Q8TCX5 695 aa8.45□□□□□ -1.06
BEST1-202ENST00000449131 DCTPP1Q9H773 170 aa8.45□□□□□ -1.06
BEST1-202ENST00000449131 PREX2Q70Z35 1606 aa8.45□□□□□ -1.06
BEST1-202ENST00000449131 PRIM1P49642 420 aaKnown RBP8.44□□□□□ -1.06
BEST1-202ENST00000449131 CBX1P83916 185 aa8.44□□□□□ -1.06
BEST1-202ENST00000449131 BRMS1Q9HCU9 246 aa8.44□□□□□ -1.06
BEST1-202ENST00000449131 HYPKQ9NX55 129 aa8.44□□□□□ -1.06
BEST1-202ENST00000449131 ZMYM4Q5VZL5 1548 aa8.44□□□□□ -1.06
BEST1-202ENST00000449131 RIMS2Q9UQ26 1411 aa8.44□□□□□ -1.06
BEST1-202ENST00000449131 TNRQ92752 1358 aa8.44□□□□□ -1.06
BEST1-202ENST00000449131 A0A087WZG4 1122 aa8.44□□□□□ -1.06
BEST1-202ENST00000449131 MAP3K11Q16584 847 aa8.44□□□□□ -1.06
BEST1-202ENST00000449131 JARID2Q92833 1246 aaPredicted RBP8.44□□□□□ -1.06
BEST1-202ENST00000449131 TMX3Q96JJ7 454 aa8.44□□□□□ -1.06
BEST1-202ENST00000449131 TCEANC2Q96MN5 208 aa8.44□□□□□ -1.06
BEST1-202ENST00000449131 MPHOSPH8Q99549 860 aa8.44□□□□□ -1.06
BEST1-202ENST00000449131 CTNNA3Q9UI47 895 aa8.44□□□□□ -1.06
BEST1-202ENST00000449131 PIK3R4Q99570 1358 aa8.44□□□□□ -1.06
BEST1-202ENST00000449131 IDH1O75874 414 aaKnown RBP8.44□□□□□ -1.06
BEST1-202ENST00000449131 CLCN1P35523 988 aa8.44□□□□□ -1.06
BEST1-202ENST00000449131 JMYQ8N9B5 988 aa8.44□□□□□ -1.06
BEST1-202ENST00000449131 MAP7D2Q96T17 732 aa8.44□□□□□ -1.06
BEST1-202ENST00000449131 SH2B1Q9NRF2 756 aaPredicted RBP8.44□□□□□ -1.06
BEST1-202ENST00000449131 TRIM35Q9UPQ4 493 aa8.44□□□□□ -1.06
BEST1-202ENST00000449131 ADCY10Q96PN6 1610 aa8.44□□□□□ -1.06
BEST1-202ENST00000449131 CLASP1Q7Z460 1538 aa8.44□□□□□ -1.06
BEST1-202ENST00000449131 YEATS2Q9ULM3 1422 aa8.44□□□□□ -1.06
BEST1-202ENST00000449131 KLHL40Q2TBA0 621 aa8.43□□□□□ -1.06
BEST1-202ENST00000449131 ZSCAN23Q3MJ62 389 aa8.43□□□□□ -1.06
BEST1-202ENST00000449131 FILIP1Q7Z7B0 1213 aa8.43□□□□□ -1.06
BEST1-202ENST00000449131 UHRF1BP1LA0JNW5 1464 aa8.43□□□□□ -1.06
BEST1-202ENST00000449131 ADGBQ8N7X0 1667 aa8.43□□□□□ -1.06
BEST1-202ENST00000449131 ZBTB7BO15156 539 aaPredicted RBP8.43□□□□□ -1.06
BEST1-202ENST00000449131 IGSF3O75054 1194 aa8.43□□□□□ -1.06
BEST1-202ENST00000449131 TNNT3P45378 269 aaPredicted RBP8.43□□□□□ -1.06
BEST1-202ENST00000449131 SNX21Q969T3 373 aa8.43□□□□□ -1.06
BEST1-202ENST00000449131 CHPF2Q9P2E5 772 aa8.43□□□□□ -1.06
BEST1-202ENST00000449131 ZHX1Q9UKY1 873 aaPredicted RBP8.43□□□□□ -1.06
BEST1-202ENST00000449131 ATP7AQ04656 1500 aa8.43□□□□□ -1.06
BEST1-202ENST00000449131 BLMP54132 1417 aaPredicted RBP8.43□□□□□ -1.06
BEST1-202ENST00000449131 ATP5J2-PTCD1G3V325 749 aa8.43□□□□□ -1.06
BEST1-202ENST00000449131 CCDC183Q5T5S1 534 aa8.43□□□□□ -1.06
BEST1-202ENST00000449131 CEP85Q6P2H3 762 aa8.43□□□□□ -1.06
BEST1-202ENST00000449131 PLEKHM2Q8IWE5 1019 aa8.43□□□□□ -1.06
BEST1-202ENST00000449131 TFIP11Q9UBB9 837 aaKnown RBP8.43□□□□□ -1.06
BEST1-202ENST00000449131 IFIT1P09914 478 aaKnown RBP8.43□□□□□ -1.06
BEST1-202ENST00000449131 ATP8B2P98198 1209 aa8.43□□□□□ -1.06
BEST1-202ENST00000449131 CKAP2LQ8IYA6 745 aa8.43□□□□□ -1.06
BEST1-202ENST00000449131 TRIM22Q8IYM9 498 aa8.43□□□□□ -1.06
BEST1-202ENST00000449131 NUP133Q8WUM0 1156 aa8.43□□□□□ -1.06
BEST1-202ENST00000449131 EVI5LQ96CN4 794 aa8.43□□□□□ -1.06
BEST1-202ENST00000449131 ZSCAN25Q6NSZ9 544 aa8.42□□□□□ -1.06
BEST1-202ENST00000449131 UBE3BQ7Z3V4 1068 aa8.42□□□□□ -1.06
BEST1-202ENST00000449131 MTERF4Q7Z6M4 381 aaKnown RBP8.42□□□□□ -1.06
BEST1-202ENST00000449131 ESYT1Q9BSJ8 1104 aa8.42□□□□□ -1.06
BEST1-202ENST00000449131 NACAP1Q9BZK3 213 aa8.42□□□□□ -1.06
BEST1-202ENST00000449131 U3KPZ7 1027 aaPredicted RBP8.42□□□□□ -1.06
BEST1-202ENST00000449131 NPATQ14207 1427 aa8.42□□□□□ -1.06
BEST1-202ENST00000449131 ARHGEF5Q12774 1597 aa8.42□□□□□ -1.06
BEST1-202ENST00000449131 TTC21AQ8NDW8 1320 aa8.42□□□□□ -1.06
BEST1-202ENST00000449131 STX6O43752 255 aa8.42□□□□□ -1.06
BEST1-202ENST00000449131 SERPINC1P01008 464 aa8.42□□□□□ -1.06
BEST1-202ENST00000449131 HCLS1P14317 486 aaPredicted RBP8.42□□□□□ -1.06
BEST1-202ENST00000449131 GUCY1B3Q02153 619 aa8.42□□□□□ -1.06
BEST1-202ENST00000449131 METTL24Q5JXM2 366 aa8.42□□□□□ -1.06
BEST1-202ENST00000449131 KRT28Q7Z3Y7 464 aa8.42□□□□□ -1.06
BEST1-202ENST00000449131 CCDC69A6NI79 296 aa8.42□□□□□ -1.06
BEST1-202ENST00000449131 BRPF1P55201 1214 aaPredicted RBP8.42□□□□□ -1.06
BEST1-202ENST00000449131 GPS2Q13227 327 aa8.42□□□□□ -1.06
BEST1-202ENST00000449131 IMMTQ16891 758 aaKnown RBP8.42□□□□□ -1.06
BEST1-202ENST00000449131 TTLL5Q6EMB2 1281 aa8.42□□□□□ -1.06
BEST1-202ENST00000449131 GAS2L3Q86XJ1 694 aa8.42□□□□□ -1.06
BEST1-202ENST00000449131 ANKRD24Q8TF21 1146 aa8.42□□□□□ -1.06
BEST1-202ENST00000449131 ZBTB9Q96C00 473 aa8.42□□□□□ -1.06
BEST1-202ENST00000449131 TRIM34Q9BYJ4 488 aa8.42□□□□□ -1.06
BEST1-202ENST00000449131 SCAND2PQ9GZW5 306 aaPredicted RBP8.42□□□□□ -1.06
BEST1-202ENST00000449131 YTHDC2Q9H6S0 1430 aaKnown RBP8.42□□□□□ -1.06
BEST1-202ENST00000449131 MAST1Q9Y2H9 1570 aa8.42□□□□□ -1.06
BEST1-202ENST00000449131 PTPRTO14522 1441 aa8.41□□□□□ -1.06
BEST1-202ENST00000449131 SPDYE4A6NLX3 237 aa8.41□□□□□ -1.06
BEST1-202ENST00000449131 GJB2P29033 226 aa8.41□□□□□ -1.06
BEST1-202ENST00000449131 CEP57L1Q8IYX8 460 aa8.41□□□□□ -1.06
BEST1-202ENST00000449131 EYA1Q99502 592 aa8.41□□□□□ -1.06
BEST1-202ENST00000449131 ZBTB3Q9H5J0 574 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms