RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 NFE2L2Q16236 605 aa11.15□□□□□ -0.62
SYNPO2-204ENST00000448416 CABP2Q9NPB3 220 aa11.15□□□□□ -0.62
SYNPO2-204ENST00000448416 COL3A1P02461 1466 aaPredicted RBP11.15□□□□□ -0.62
SYNPO2-204ENST00000448416 NEMFO60524 1076 aa11.15□□□□□ -0.62
SYNPO2-204ENST00000448416 ZNF165P49910 485 aa11.15□□□□□ -0.62
SYNPO2-204ENST00000448416 CLCN6P51797 869 aa11.15□□□□□ -0.62
SYNPO2-204ENST00000448416 GTF2A1P52655 376 aaPredicted RBP11.15□□□□□ -0.62
SYNPO2-204ENST00000448416 GOLGA6L4A6NEF3 574 aa11.15□□□□□ -0.63
SYNPO2-204ENST00000448416 LIG1P18858 919 aa11.15□□□□□ -0.63
SYNPO2-204ENST00000448416 PLA2G4AP47712 749 aa11.15□□□□□ -0.63
SYNPO2-204ENST00000448416 GPS2Q13227 327 aa11.15□□□□□ -0.63
SYNPO2-204ENST00000448416 KRT24Q2M2I5 525 aa11.15□□□□□ -0.63
SYNPO2-204ENST00000448416 TDRD7Q8NHU6 1098 aaKnown RBP11.15□□□□□ -0.63
SYNPO2-204ENST00000448416 MEIS3Q99687 375 aa11.15□□□□□ -0.63
SYNPO2-204ENST00000448416 LIMCH1Q9UPQ0 1083 aa11.15□□□□□ -0.63
SYNPO2-204ENST00000448416 ARID5BQ14865 1188 aa11.14□□□□□ -0.63
SYNPO2-204ENST00000448416 MUM1L1Q5H9M0 696 aa11.14□□□□□ -0.63
SYNPO2-204ENST00000448416 CHMP4CQ96CF2 233 aa11.14□□□□□ -0.63
SYNPO2-204ENST00000448416 DTNBO60941 627 aa11.14□□□□□ -0.63
SYNPO2-204ENST00000448416 AK2P54819 239 aa11.14□□□□□ -0.63
SYNPO2-204ENST00000448416 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.14□□□□□ -0.63
SYNPO2-204ENST00000448416 LRRFIP2Q9Y608 721 aaKnown RBP11.14□□□□□ -0.63
SYNPO2-204ENST00000448416 PTPRCP08575 1304 aa11.14□□□□□ -0.63
SYNPO2-204ENST00000448416 MYO1CO00159 1063 aa11.14□□□□□ -0.63
SYNPO2-204ENST00000448416 DHX16O60231 1041 aaKnown RBP11.14□□□□□ -0.63
SYNPO2-204ENST00000448416 HMOX1P09601 288 aa11.14□□□□□ -0.63
SYNPO2-204ENST00000448416 PHACTR3Q96KR7 559 aa11.14□□□□□ -0.63
SYNPO2-204ENST00000448416 GJB2P29033 226 aa11.13□□□□□ -0.63
SYNPO2-204ENST00000448416 NOP2P46087 812 aaKnown RBP11.13□□□□□ -0.63
SYNPO2-204ENST00000448416 GEMIN8Q9NWZ8 242 aaKnown RBP11.13□□□□□ -0.63
SYNPO2-204ENST00000448416 DACT1Q9NYF0 836 aa11.13□□□□□ -0.63
SYNPO2-204ENST00000448416 MTMR6Q9Y217 621 aa11.13□□□□□ -0.63
SYNPO2-204ENST00000448416 QRICH2Q9H0J4 1663 aa11.13□□□□□ -0.63
SYNPO2-204ENST00000448416 SSH2Q76I76 1423 aa11.13□□□□□ -0.63
SYNPO2-204ENST00000448416 ERBB3P21860 1342 aa11.13□□□□□ -0.63
SYNPO2-204ENST00000448416 ARHGEF40Q8TER5 1519 aa11.13□□□□□ -0.63
SYNPO2-204ENST00000448416 GOLGA6L19H0YKK7 550 aa11.13□□□□□ -0.63
SYNPO2-204ENST00000448416 KIF2AO00139 706 aaPredicted RBP11.13□□□□□ -0.63
SYNPO2-204ENST00000448416 TRIM66O15016 1216 aa11.13□□□□□ -0.63
SYNPO2-204ENST00000448416 TMCO3Q6UWJ1 677 aa11.13□□□□□ -0.63
SYNPO2-204ENST00000448416 CCDC191Q8NCU4 936 aa11.13□□□□□ -0.63
SYNPO2-204ENST00000448416 DNAJC25Q9H1X3 360 aa11.13□□□□□ -0.63
SYNPO2-204ENST00000448416 ARGLU1Q9NWB6 273 aaPredicted RBP11.13□□□□□ -0.63
SYNPO2-204ENST00000448416 HSPA4P34932 840 aa11.13□□□□□ -0.63
SYNPO2-204ENST00000448416 KRT85P78386 507 aa11.13□□□□□ -0.63
SYNPO2-204ENST00000448416 ARHGAP29Q52LW3 1261 aa11.13□□□□□ -0.63
SYNPO2-204ENST00000448416 CTR9Q6PD62 1173 aa11.13□□□□□ -0.63
SYNPO2-204ENST00000448416 TTC6Q86TZ1 520 aa11.13□□□□□ -0.63
SYNPO2-204ENST00000448416 CWC15Q9P013 229 aaKnown RBP11.13□□□□□ -0.63
SYNPO2-204ENST00000448416 EXOC6BQ9Y2D4 811 aa11.13□□□□□ -0.63
SYNPO2-204ENST00000448416 CASQ1P31415 396 aa11.12□□□□□ -0.63
SYNPO2-204ENST00000448416 ZSCAN26Q16670 478 aa11.12□□□□□ -0.63
SYNPO2-204ENST00000448416 FILIP1Q7Z7B0 1213 aa11.12□□□□□ -0.63
SYNPO2-204ENST00000448416 CCDC83Q8IWF9 413 aa11.12□□□□□ -0.63
SYNPO2-204ENST00000448416 CCAR2Q8N163 923 aaKnown RBP11.12□□□□□ -0.63
SYNPO2-204ENST00000448416 IL17RAQ96F46 866 aa11.12□□□□□ -0.63
SYNPO2-204ENST00000448416 POLKQ9UBT6 870 aa11.12□□□□□ -0.63
SYNPO2-204ENST00000448416 INO80Q9ULG1 1556 aaPredicted RBP11.12□□□□□ -0.63
SYNPO2-204ENST00000448416 ZNF853P0CG23 659 aa11.12□□□□□ -0.63
SYNPO2-204ENST00000448416 CDC25BP30305 580 aa11.12□□□□□ -0.63
SYNPO2-204ENST00000448416 MSH6P52701 1360 aa11.12□□□□□ -0.63
SYNPO2-204ENST00000448416 CCDC69A6NI79 296 aa11.12□□□□□ -0.63
SYNPO2-204ENST00000448416 FYB1O15117 783 aa11.12□□□□□ -0.63
SYNPO2-204ENST00000448416 ST5P78524 1137 aa11.12□□□□□ -0.63
SYNPO2-204ENST00000448416 RUFY3Q7L099 469 aa11.12□□□□□ -0.63
SYNPO2-204ENST00000448416 SMARCE1Q969G3 411 aa11.12□□□□□ -0.63
SYNPO2-204ENST00000448416 NFATC2IPQ8NCF5 419 aa11.11□□□□□ -0.63
SYNPO2-204ENST00000448416 PUS7Q96PZ0 661 aaKnown RBP11.11□□□□□ -0.63
SYNPO2-204ENST00000448416 GYS2P54840 703 aa11.11□□□□□ -0.63
SYNPO2-204ENST00000448416 SAFB2Q14151 953 aaKnown RBP eCLIP11.11□□□□□ -0.63
SYNPO2-204ENST00000448416 UGGT1Q9NYU2 1555 aa11.11□□□□□ -0.63
SYNPO2-204ENST00000448416 SNW1Q13573 536 aaKnown RBP11.11□□□□□ -0.63
SYNPO2-204ENST00000448416 DDX19AQ9NUU7 478 aaKnown RBP11.11□□□□□ -0.63
SYNPO2-204ENST00000448416 LCMT1Q9UIC8 334 aa11.11□□□□□ -0.63
SYNPO2-204ENST00000448416 A0A1W2PP64 1363 aa11.1□□□□□ -0.63
SYNPO2-204ENST00000448416 ICE2Q659A1 982 aa11.1□□□□□ -0.63
SYNPO2-204ENST00000448416 TTC14Q96N46 770 aa11.1□□□□□ -0.63
SYNPO2-204ENST00000448416 C14orf93Q9H972 538 aaKnown RBP11.1□□□□□ -0.63
SYNPO2-204ENST00000448416 LRRC7Q96NW7 1537 aa11.1□□□□□ -0.63
SYNPO2-204ENST00000448416 FERMT3Q86UX7 667 aa11.1□□□□□ -0.63
SYNPO2-204ENST00000448416 GOLGA6L1Q8N7Z2 621 aa11.1□□□□□ -0.63
SYNPO2-204ENST00000448416 UBXN4Q92575 508 aa11.1□□□□□ -0.63
SYNPO2-204ENST00000448416 LRRCC1Q9C099 1032 aa11.1□□□□□ -0.63
SYNPO2-204ENST00000448416 USP16Q9Y5T5 823 aa11.1□□□□□ -0.63
SYNPO2-204ENST00000448416 SNX14Q9Y5W7 946 aa11.1□□□□□ -0.63
SYNPO2-204ENST00000448416 LOC102724159A0A0B4J2E5 919 aa11.09□□□□□ -0.63
SYNPO2-204ENST00000448416 PWP2Q15269 919 aaKnown RBP11.09□□□□□ -0.63
SYNPO2-204ENST00000448416 GORABQ5T7V8 394 aa11.09□□□□□ -0.63
SYNPO2-204ENST00000448416 FAM173BQ6P4H8 233 aa11.09□□□□□ -0.63
SYNPO2-204ENST00000448416 UNC5CLQ8IV45 518 aa11.09□□□□□ -0.63
SYNPO2-204ENST00000448416 LRRN4CLQ8ND94 238 aa11.09□□□□□ -0.63
SYNPO2-204ENST00000448416 L2HGDHQ9H9P8 463 aa11.09□□□□□ -0.63
SYNPO2-204ENST00000448416 ZCCHC17Q9NP64 241 aaKnown RBP11.09□□□□□ -0.63
SYNPO2-204ENST00000448416 ELP1O95163 1332 aa11.09□□□□□ -0.63
SYNPO2-204ENST00000448416 MRFAP1L1Q96HT8 127 aa11.09□□□□□ -0.63
SYNPO2-204ENST00000448416 IL25Q9H293 177 aa11.09□□□□□ -0.63
SYNPO2-204ENST00000448416 ZRANB2O95218 330 aaKnown RBP eCLIP11.09□□□□□ -0.63
SYNPO2-204ENST00000448416 LARGE1O95461 756 aa11.09□□□□□ -0.63
SYNPO2-204ENST00000448416 CCZ1BP86790 482 aa11.09□□□□□ -0.63
SYNPO2-204ENST00000448416 CCZ1P86791 482 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms