RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 CNTNAP1P78357 1384 aa16.94■□□□□ 0.3
SSR4-205ENST00000447375 ERVV-2B6SEH9 535 aa16.94■□□□□ 0.3
SSR4-205ENST00000447375 PPM1GO15355 546 aaPredicted RBP16.94■□□□□ 0.3
SSR4-205ENST00000447375 LBX1P52954 281 aa16.94■□□□□ 0.3
SSR4-205ENST00000447375 EYA1Q99502 592 aa16.94■□□□□ 0.3
SSR4-205ENST00000447375 CRKLP46109 303 aaKnown RBP16.92■□□□□ 0.3
SSR4-205ENST00000447375 TTLL6Q8N841 843 aa16.92■□□□□ 0.3
SSR4-205ENST00000447375 ZNF831Q5JPB2 1677 aa16.91■□□□□ 0.3
SSR4-205ENST00000447375 VEGFBP49765 207 aa16.91■□□□□ 0.3
SSR4-205ENST00000447375 MLLT1Q03111 559 aaPredicted RBP16.91■□□□□ 0.3
SSR4-205ENST00000447375 MORC1Q86VD1 984 aa16.91■□□□□ 0.3
SSR4-205ENST00000447375 POLKQ9UBT6 870 aa16.91■□□□□ 0.3
SSR4-205ENST00000447375 COL5A3P25940 1745 aaPredicted RBP16.9■□□□□ 0.3
SSR4-205ENST00000447375 NFKBIEO00221 500 aa16.9■□□□□ 0.3
SSR4-205ENST00000447375 PTCD1O75127 700 aaKnown RBP16.9■□□□□ 0.3
SSR4-205ENST00000447375 WBP1LQ9NX94 342 aa16.9■□□□□ 0.3
SSR4-205ENST00000447375 ZPR1O75312 459 aa16.89■□□□□ 0.29
SSR4-205ENST00000447375 POTEIP0CG38 1075 aa16.89■□□□□ 0.29
SSR4-205ENST00000447375 POTEJP0CG39 1038 aa16.89■□□□□ 0.29
SSR4-205ENST00000447375 TNNT2P45379 298 aaPredicted RBP16.89■□□□□ 0.29
SSR4-205ENST00000447375 CABP4P57796 275 aa16.89■□□□□ 0.29
SSR4-205ENST00000447375 MYH14Q7Z406 1995 aaKnown RBP16.89■□□□□ 0.29
SSR4-205ENST00000447375 HSP90AB1P08238 724 aaKnown RBP16.88■□□□□ 0.29
SSR4-205ENST00000447375 ERFEQ4G0M1 354 aa16.88■□□□□ 0.29
SSR4-205ENST00000447375 USPL1Q5W0Q7 1092 aa16.88■□□□□ 0.29
SSR4-205ENST00000447375 NPC1L1Q9UHC9 1359 aa16.88■□□□□ 0.29
SSR4-205ENST00000447375 CCDC85CA6NKD9 419 aa16.87■□□□□ 0.29
SSR4-205ENST00000447375 C2CD5Q86YS7 1000 aa16.87■□□□□ 0.29
SSR4-205ENST00000447375 PASKQ96RG2 1323 aa16.87■□□□□ 0.29
SSR4-205ENST00000447375 TIAM2Q8IVF5 1701 aa16.87■□□□□ 0.29
SSR4-205ENST00000447375 TMEM88BA6NKF7 163 aa16.86■□□□□ 0.29
SSR4-205ENST00000447375 H0YIN7 160 aa16.86■□□□□ 0.29
SSR4-205ENST00000447375 HSPA8P11142 646 aaKnown RBP16.86■□□□□ 0.29
SSR4-205ENST00000447375 RGS19P49795 217 aa16.86■□□□□ 0.29
SSR4-205ENST00000447375 INTS5Q6P9B9 1019 aaKnown RBP16.86■□□□□ 0.29
SSR4-205ENST00000447375 DDNO94850 711 aaPredicted RBP16.85■□□□□ 0.29
SSR4-205ENST00000447375 NFIXQ14938 502 aa16.85■□□□□ 0.29
SSR4-205ENST00000447375 VIRMAQ69YN4 1812 aaKnown RBP16.84■□□□□ 0.29
SSR4-205ENST00000447375 SERPINB2P05120 415 aa16.84■□□□□ 0.29
SSR4-205ENST00000447375 CC2D1BQ5T0F9 858 aaKnown RBP16.84■□□□□ 0.29
SSR4-205ENST00000447375 LDHDQ86WU2 507 aa16.84■□□□□ 0.29
SSR4-205ENST00000447375 CCDC88AQ3V6T2 1871 aa16.84■□□□□ 0.29
SSR4-205ENST00000447375 PLEKHO1Q53GL0 409 aaPredicted RBP16.82■□□□□ 0.28
SSR4-205ENST00000447375 NFATC2IPQ8NCF5 419 aa16.82■□□□□ 0.28
SSR4-205ENST00000447375 ZNF219Q9P2Y4 722 aaPredicted RBP16.82■□□□□ 0.28
SSR4-205ENST00000447375 IQCA1LA6NCM1 817 aa16.81■□□□□ 0.28
SSR4-205ENST00000447375 C21orf2O43822 256 aa16.81■□□□□ 0.28
SSR4-205ENST00000447375 ITGBL1O95965 494 aaPredicted RBP16.81■□□□□ 0.28
SSR4-205ENST00000447375 MTHFSP49914 203 aa16.81■□□□□ 0.28
SSR4-205ENST00000447375 MAP2K1Q02750 393 aaPredicted RBP16.81■□□□□ 0.28
SSR4-205ENST00000447375 DEFB115Q30KQ5 88 aa16.81■□□□□ 0.28
SSR4-205ENST00000447375 ZNF622Q969S3 477 aaKnown RBP eCLIP16.81■□□□□ 0.28
SSR4-205ENST00000447375 NARFQ9UHQ1 456 aa16.81■□□□□ 0.28
SSR4-205ENST00000447375 EIF4A2Q14240 407 aaKnown RBP16.8■□□□□ 0.28
SSR4-205ENST00000447375 ZNF530Q6P9A1 599 aaPredicted RBP16.8■□□□□ 0.28
SSR4-205ENST00000447375 SOS1Q07889 1333 aaPredicted RBP16.79■□□□□ 0.28
SSR4-205ENST00000447375 RASSF10A6NK89 507 aa16.79■□□□□ 0.28
SSR4-205ENST00000447375 DNAJC10Q8IXB1 793 aa16.79■□□□□ 0.28
SSR4-205ENST00000447375 TAOK3Q9H2K8 898 aa16.79■□□□□ 0.28
SSR4-205ENST00000447375 TAF1DQ9H5J8 278 aaPredicted RBP16.79■□□□□ 0.28
SSR4-205ENST00000447375 WDR33Q9C0J8 1336 aaKnown RBP16.78■□□□□ 0.28
SSR4-205ENST00000447375 AMOTQ4VCS5 1084 aa16.78■□□□□ 0.28
SSR4-205ENST00000447375 BCL2L12Q9HB09 334 aa16.78■□□□□ 0.28
SSR4-205ENST00000447375 DLEC1Q9Y238 1755 aa16.78■□□□□ 0.28
SSR4-205ENST00000447375 ADAMTS7Q9UKP4 1686 aa16.78■□□□□ 0.28
SSR4-205ENST00000447375 AFDNP55196 1824 aaKnown RBP16.77■□□□□ 0.28
SSR4-205ENST00000447375 EAPPQ56P03 285 aaPredicted RBP16.77■□□□□ 0.28
SSR4-205ENST00000447375 PDZRN3Q9UPQ7 1066 aa16.77■□□□□ 0.28
SSR4-205ENST00000447375 CLEC11AQ9Y240 323 aa16.77■□□□□ 0.28
SSR4-205ENST00000447375 CARMIL3Q8ND23 1372 aa16.77■□□□□ 0.27
SSR4-205ENST00000447375 NRXN2Q9P2S2 1712 aa16.76■□□□□ 0.27
SSR4-205ENST00000447375 LTBP3Q9NS15 1303 aa16.76■□□□□ 0.27
SSR4-205ENST00000447375 CNGB1Q14028 1251 aaPredicted RBP16.76■□□□□ 0.27
SSR4-205ENST00000447375 C1orf141Q5JVX7 400 aa16.76■□□□□ 0.27
SSR4-205ENST00000447375 L3MBTL3Q96JM7 780 aaPredicted RBP16.76■□□□□ 0.27
SSR4-205ENST00000447375 TJP1Q07157 1748 aa16.76■□□□□ 0.27
SSR4-205ENST00000447375 PDE6BP35913 854 aa16.75■□□□□ 0.27
SSR4-205ENST00000447375 DDX10Q13206 875 aaKnown RBP16.75■□□□□ 0.27
SSR4-205ENST00000447375 BICDL1Q6ZP65 573 aa16.75■□□□□ 0.27
SSR4-205ENST00000447375 COL15A1P39059 1388 aa16.75■□□□□ 0.27
SSR4-205ENST00000447375 DICER1Q9UPY3 1922 aaKnown RBP16.74■□□□□ 0.27
SSR4-205ENST00000447375 CYP19A1P11511 503 aaPredicted RBP16.74■□□□□ 0.27
SSR4-205ENST00000447375 IL13P35225 146 aa16.74■□□□□ 0.27
SSR4-205ENST00000447375 CFAP44Q96MT7 982 aa16.74■□□□□ 0.27
SSR4-205ENST00000447375 BEGAINQ9BUH8 593 aa16.74■□□□□ 0.27
SSR4-205ENST00000447375 CNTROBQ8N137 903 aa16.73■□□□□ 0.27
SSR4-205ENST00000447375 BRIP1Q9BX63 1249 aa16.73■□□□□ 0.27
SSR4-205ENST00000447375 ABT1Q9ULW3 272 aaKnown RBP16.73■□□□□ 0.27
SSR4-205ENST00000447375 ZBTB1Q9Y2K1 713 aa16.73■□□□□ 0.27
SSR4-205ENST00000447375 SCN11AQ9UI33 1791 aa16.73■□□□□ 0.27
SSR4-205ENST00000447375 HACL1Q9UJ83 578 aa16.72■□□□□ 0.27
SSR4-205ENST00000447375 FER1L6Q2WGJ9 1857 aa16.71■□□□□ 0.27
SSR4-205ENST00000447375 MAP1SQ66K74 1059 aaPredicted RBP16.71■□□□□ 0.27
SSR4-205ENST00000447375 CCDC24Q8N4L8 307 aa16.71■□□□□ 0.27
SSR4-205ENST00000447375 CNKSR1Q969H4 720 aa16.71■□□□□ 0.27
SSR4-205ENST00000447375 PPP2R1AP30153 589 aa16.7■□□□□ 0.26
SSR4-205ENST00000447375 EPHX2P34913 555 aa16.7■□□□□ 0.26
SSR4-205ENST00000447375 SOGA3Q5TF21 947 aa16.7■□□□□ 0.26
SSR4-205ENST00000447375 PNMA8AQ86V59 439 aaPredicted RBP16.7■□□□□ 0.26
SSR4-205ENST00000447375 SCN4AP35499 1836 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 244.5 ms