RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 FOXN1O15353 648 aa9.85□□□□□ -0.83
LRRC28-203ENST00000447360 CDCA8Q53HL2 280 aa9.85□□□□□ -0.83
LRRC28-203ENST00000447360 TTLL6Q8N841 843 aa9.85□□□□□ -0.83
LRRC28-203ENST00000447360 PCDH10Q9P2E7 1040 aa9.85□□□□□ -0.83
LRRC28-203ENST00000447360 PTCD1O75127 700 aaKnown RBP9.84□□□□□ -0.83
LRRC28-203ENST00000447360 ZPR1O75312 459 aa9.84□□□□□ -0.83
LRRC28-203ENST00000447360 CTCFP49711 727 aaPredicted RBP9.84□□□□□ -0.83
LRRC28-203ENST00000447360 CABP4P57796 275 aa9.84□□□□□ -0.83
LRRC28-203ENST00000447360 CHADLQ6NUI6 762 aa9.84□□□□□ -0.83
LRRC28-203ENST00000447360 CARD14Q9BXL6 1004 aa9.84□□□□□ -0.83
LRRC28-203ENST00000447360 MKRN1Q9UHC7 482 aaKnown RBP9.84□□□□□ -0.83
LRRC28-203ENST00000447360 NFKBIEO00221 500 aa9.83□□□□□ -0.84
LRRC28-203ENST00000447360 AMOTQ4VCS5 1084 aa9.83□□□□□ -0.84
LRRC28-203ENST00000447360 PLEKHO1Q53GL0 409 aaPredicted RBP9.83□□□□□ -0.84
LRRC28-203ENST00000447360 INTS5Q6P9B9 1019 aaKnown RBP9.83□□□□□ -0.84
LRRC28-203ENST00000447360 AIDAQ96BJ3 306 aa9.83□□□□□ -0.84
LRRC28-203ENST00000447360 POLKQ9UBT6 870 aa9.83□□□□□ -0.84
LRRC28-203ENST00000447360 CNTNAP1P78357 1384 aa9.83□□□□□ -0.84
LRRC28-203ENST00000447360 SBF1O95248 1867 aa9.83□□□□□ -0.84
LRRC28-203ENST00000447360 EIF4A2Q14240 407 aaKnown RBP9.82□□□□□ -0.84
LRRC28-203ENST00000447360 USPL1Q5W0Q7 1092 aa9.82□□□□□ -0.84
LRRC28-203ENST00000447360 COL5A3P25940 1745 aaPredicted RBP9.82□□□□□ -0.84
LRRC28-203ENST00000447360 H0YIN7 160 aa9.81□□□□□ -0.84
LRRC28-203ENST00000447360 MTHFSP49914 203 aa9.81□□□□□ -0.84
LRRC28-203ENST00000447360 NFIXQ14938 502 aa9.81□□□□□ -0.84
LRRC28-203ENST00000447360 ERFEQ4G0M1 354 aa9.81□□□□□ -0.84
LRRC28-203ENST00000447360 NFATC2IPQ8NCF5 419 aa9.81□□□□□ -0.84
LRRC28-203ENST00000447360 SERPINB2P05120 415 aa9.8□□□□□ -0.84
LRRC28-203ENST00000447360 ZNF530Q6P9A1 599 aaPredicted RBP9.8□□□□□ -0.84
LRRC28-203ENST00000447360 C2CD5Q86YS7 1000 aa9.8□□□□□ -0.84
LRRC28-203ENST00000447360 WBP1LQ9NX94 342 aa9.8□□□□□ -0.84
LRRC28-203ENST00000447360 NARFQ9UHQ1 456 aa9.8□□□□□ -0.84
LRRC28-203ENST00000447360 PDZRN3Q9UPQ7 1066 aa9.8□□□□□ -0.84
LRRC28-203ENST00000447360 MYH14Q7Z406 1995 aaKnown RBP9.8□□□□□ -0.84
LRRC28-203ENST00000447360 SOS1Q07889 1333 aaPredicted RBP9.8□□□□□ -0.84
LRRC28-203ENST00000447360 PASKQ96RG2 1323 aa9.8□□□□□ -0.84
LRRC28-203ENST00000447360 VEGFBP49765 207 aa9.79□□□□□ -0.84
LRRC28-203ENST00000447360 FAM161AQ3B820 660 aa9.79□□□□□ -0.84
LRRC28-203ENST00000447360 C1orf141Q5JVX7 400 aa9.79□□□□□ -0.84
LRRC28-203ENST00000447360 ABHD8Q96I13 439 aa9.79□□□□□ -0.84
LRRC28-203ENST00000447360 LTBP3Q9NS15 1303 aa9.79□□□□□ -0.84
LRRC28-203ENST00000447360 IQCA1LA6NCM1 817 aa9.78□□□□□ -0.84
LRRC28-203ENST00000447360 TMEM88BA6NKF7 163 aa9.78□□□□□ -0.84
LRRC28-203ENST00000447360 POTEIP0CG38 1075 aa9.78□□□□□ -0.84
LRRC28-203ENST00000447360 POTEJP0CG39 1038 aa9.78□□□□□ -0.84
LRRC28-203ENST00000447360 LBX1P52954 281 aa9.78□□□□□ -0.84
LRRC28-203ENST00000447360 LDHDQ86WU2 507 aa9.78□□□□□ -0.84
LRRC28-203ENST00000447360 ANKRD26Q9UPS8 1709 aa9.78□□□□□ -0.84
LRRC28-203ENST00000447360 KIF20BQ96Q89 1820 aa9.77□□□□□ -0.84
LRRC28-203ENST00000447360 C21orf2O43822 256 aa9.77□□□□□ -0.85
LRRC28-203ENST00000447360 DDNO94850 711 aaPredicted RBP9.77□□□□□ -0.85
LRRC28-203ENST00000447360 CYP19A1P11511 503 aaPredicted RBP9.77□□□□□ -0.85
LRRC28-203ENST00000447360 RGS19P49795 217 aa9.77□□□□□ -0.85
LRRC28-203ENST00000447360 DNAJC10Q8IXB1 793 aa9.77□□□□□ -0.85
LRRC28-203ENST00000447360 BRIP1Q9BX63 1249 aa9.77□□□□□ -0.85
LRRC28-203ENST00000447360 BCL2L12Q9HB09 334 aa9.77□□□□□ -0.85
LRRC28-203ENST00000447360 ITGBL1O95965 494 aaPredicted RBP9.76□□□□□ -0.85
LRRC28-203ENST00000447360 PDE6BP35913 854 aa9.76□□□□□ -0.85
LRRC28-203ENST00000447360 MAP2K1Q02750 393 aaPredicted RBP9.76□□□□□ -0.85
LRRC28-203ENST00000447360 MLLT1Q03111 559 aaPredicted RBP9.76□□□□□ -0.85
LRRC28-203ENST00000447360 ZNF622Q969S3 477 aaKnown RBP eCLIP9.76□□□□□ -0.85
LRRC28-203ENST00000447360 L3MBTL3Q96JM7 780 aaPredicted RBP9.76□□□□□ -0.85
LRRC28-203ENST00000447360 TAOK3Q9H2K8 898 aa9.76□□□□□ -0.85
LRRC28-203ENST00000447360 TAF1DQ9H5J8 278 aaPredicted RBP9.76□□□□□ -0.85
LRRC28-203ENST00000447360 COL15A1P39059 1388 aa9.75□□□□□ -0.85
LRRC28-203ENST00000447360 ADAMTS7Q9UKP4 1686 aa9.75□□□□□ -0.85
LRRC28-203ENST00000447360 RASSF10A6NK89 507 aa9.75□□□□□ -0.85
LRRC28-203ENST00000447360 HSPA8P11142 646 aaKnown RBP9.75□□□□□ -0.85
LRRC28-203ENST00000447360 TRIM26Q12899 539 aaPredicted RBP9.75□□□□□ -0.85
LRRC28-203ENST00000447360 SOGA3Q5TF21 947 aa9.75□□□□□ -0.85
LRRC28-203ENST00000447360 SAMD1Q6SPF0 538 aaPredicted RBP9.75□□□□□ -0.85
LRRC28-203ENST00000447360 VSIG10Q8N0Z9 540 aa9.75□□□□□ -0.85
LRRC28-203ENST00000447360 ZBTB1Q9Y2K1 713 aa9.75□□□□□ -0.85
LRRC28-203ENST00000447360 CARMIL3Q8ND23 1372 aa9.75□□□□□ -0.85
LRRC28-203ENST00000447360 TIAM2Q8IVF5 1701 aa9.74□□□□□ -0.85
LRRC28-203ENST00000447360 NRXN2Q9P2S2 1712 aa9.74□□□□□ -0.85
LRRC28-203ENST00000447360 TNNT2P45379 298 aaPredicted RBP9.74□□□□□ -0.85
LRRC28-203ENST00000447360 DEFB115Q30KQ5 88 aa9.74□□□□□ -0.85
LRRC28-203ENST00000447360 CNKSR1Q969H4 720 aa9.74□□□□□ -0.85
LRRC28-203ENST00000447360 SLC52A2Q9HAB3 445 aa9.74□□□□□ -0.85
LRRC28-203ENST00000447360 SPINK5Q9NQ38 1064 aaPredicted RBP9.74□□□□□ -0.85
LRRC28-203ENST00000447360 A0A087WZG4 1122 aa9.73□□□□□ -0.85
LRRC28-203ENST00000447360 PLCB2Q00722 1185 aa9.73□□□□□ -0.85
LRRC28-203ENST00000447360 AKAP4Q5JQC9 854 aa9.73□□□□□ -0.85
LRRC28-203ENST00000447360 AEBP1Q8IUX7 1158 aa9.73□□□□□ -0.85
LRRC28-203ENST00000447360 ZNF219Q9P2Y4 722 aaPredicted RBP9.73□□□□□ -0.85
LRRC28-203ENST00000447360 FBXO3Q9UK99 471 aa9.73□□□□□ -0.85
LRRC28-203ENST00000447360 WDR33Q9C0J8 1336 aaKnown RBP9.73□□□□□ -0.85
LRRC28-203ENST00000447360 TJP1Q07157 1748 aa9.73□□□□□ -0.85
LRRC28-203ENST00000447360 CCDC85CA6NKD9 419 aa9.72□□□□□ -0.85
LRRC28-203ENST00000447360 STARD3NLO95772 234 aa9.72□□□□□ -0.85
LRRC28-203ENST00000447360 EIF5P55010 431 aaKnown RBP9.72□□□□□ -0.85
LRRC28-203ENST00000447360 SULT6B1Q6IMI4 303 aa9.72□□□□□ -0.85
LRRC28-203ENST00000447360 STYK1Q6J9G0 422 aa9.72□□□□□ -0.85
LRRC28-203ENST00000447360 PRR5LQ6MZQ0 368 aa9.72□□□□□ -0.85
LRRC28-203ENST00000447360 BICDL1Q6ZP65 573 aa9.72□□□□□ -0.85
LRRC28-203ENST00000447360 PNMA8AQ86V59 439 aaPredicted RBP9.72□□□□□ -0.85
LRRC28-203ENST00000447360 DLEC1Q9Y238 1755 aa9.72□□□□□ -0.85
LRRC28-203ENST00000447360 CANXP27824 592 aaKnown RBP9.71□□□□□ -0.86
LRRC28-203ENST00000447360 SLC39A6Q13433 755 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms