RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 TRAK2O60296 914 aa20.97■□□□□ 0.95
ATG9A-215ENST00000446716 IL2RBP14784 551 aa20.97■□□□□ 0.95
ATG9A-215ENST00000446716 CTCFLQ8NI51 663 aaPredicted RBP20.97■□□□□ 0.95
ATG9A-215ENST00000446716 WDR78Q5VTH9 848 aa20.96■□□□□ 0.95
ATG9A-215ENST00000446716 SMARCE1Q969G3 411 aa20.96■□□□□ 0.95
ATG9A-215ENST00000446716 DDX11Q96FC9 970 aa20.96■□□□□ 0.95
ATG9A-215ENST00000446716 CCDC96Q2M329 555 aa20.96■□□□□ 0.95
ATG9A-215ENST00000446716 SLC39A6Q13433 755 aa20.96■□□□□ 0.95
ATG9A-215ENST00000446716 SETDB2Q96T68 719 aa20.96■□□□□ 0.95
ATG9A-215ENST00000446716 TRIM27P14373 513 aa20.95■□□□□ 0.94
ATG9A-215ENST00000446716 MNS1Q8NEH6 495 aa20.95■□□□□ 0.94
ATG9A-215ENST00000446716 CCDC196A0A1B0GTZ2 297 aa20.95■□□□□ 0.94
ATG9A-215ENST00000446716 CCDC152Q4G0S7 254 aa20.95■□□□□ 0.94
ATG9A-215ENST00000446716 TTLL5Q6EMB2 1281 aa20.95■□□□□ 0.94
ATG9A-215ENST00000446716 RNF41Q9H4P4 317 aaPredicted RBP20.95■□□□□ 0.94
ATG9A-215ENST00000446716 CFAP45Q9UL16 551 aa20.95■□□□□ 0.94
ATG9A-215ENST00000446716 NASPP49321 788 aaPredicted RBP20.95■□□□□ 0.94
ATG9A-215ENST00000446716 DACH1Q9UI36 760 aa20.95■□□□□ 0.94
ATG9A-215ENST00000446716 ZNF213O14771 459 aa20.94■□□□□ 0.94
ATG9A-215ENST00000446716 AKAP4Q5JQC9 854 aa20.94■□□□□ 0.94
ATG9A-215ENST00000446716 JARID2Q92833 1246 aaPredicted RBP20.93■□□□□ 0.94
ATG9A-215ENST00000446716 SPATA32Q96LK8 384 aa20.93■□□□□ 0.94
ATG9A-215ENST00000446716 TANGO6Q9C0B7 1094 aa20.93■□□□□ 0.94
ATG9A-215ENST00000446716 TSPY26PQ9H489 355 aa20.93■□□□□ 0.94
ATG9A-215ENST00000446716 SNRKQ9NRH2 765 aa20.93■□□□□ 0.94
ATG9A-215ENST00000446716 BACH2Q9BYV9 841 aa20.93■□□□□ 0.94
ATG9A-215ENST00000446716 TNMDQ9H2S6 317 aa20.93■□□□□ 0.94
ATG9A-215ENST00000446716 TBX22Q9Y458 520 aa20.93■□□□□ 0.94
ATG9A-215ENST00000446716 XAGE3Q8WTP9 111 aa20.93■□□□□ 0.94
ATG9A-215ENST00000446716 ECHDC1Q9NTX5 307 aa20.93■□□□□ 0.94
ATG9A-215ENST00000446716 BAG3O95817 575 aa20.92■□□□□ 0.94
ATG9A-215ENST00000446716 TNIP1Q15025 636 aa20.92■□□□□ 0.94
ATG9A-215ENST00000446716 TTF1Q15361 905 aaPredicted RBP20.92■□□□□ 0.94
ATG9A-215ENST00000446716 UPF3BQ9BZI7 483 aaKnown RBP20.92■□□□□ 0.94
ATG9A-215ENST00000446716 GCP02774 474 aa20.92■□□□□ 0.94
ATG9A-215ENST00000446716 ZNHIT6Q9NWK9 470 aaKnown RBP20.92■□□□□ 0.94
ATG9A-215ENST00000446716 RDXP35241 583 aaKnown RBP20.92■□□□□ 0.94
ATG9A-215ENST00000446716 IL16Q14005 1332 aa20.92■□□□□ 0.94
ATG9A-215ENST00000446716 GOLIM4O00461 696 aa20.91■□□□□ 0.94
ATG9A-215ENST00000446716 COPS6Q7L5N1 327 aa20.91■□□□□ 0.94
ATG9A-215ENST00000446716 FEZ1Q99689 392 aa20.91■□□□□ 0.94
ATG9A-215ENST00000446716 SERPINC1P01008 464 aa20.91■□□□□ 0.94
ATG9A-215ENST00000446716 NLRP3Q96P20 1036 aa20.91■□□□□ 0.94
ATG9A-215ENST00000446716 UGGT2Q9NYU1 1516 aa20.91■□□□□ 0.94
ATG9A-215ENST00000446716 SPTY2D1Q68D10 685 aaPredicted RBP20.91■□□□□ 0.94
ATG9A-215ENST00000446716 CHPF2Q9P2E5 772 aa20.91■□□□□ 0.94
ATG9A-215ENST00000446716 ZRANB1Q9UGI0 708 aa20.91■□□□□ 0.94
ATG9A-215ENST00000446716 EIF4A2Q14240 407 aaKnown RBP20.91■□□□□ 0.94
ATG9A-215ENST00000446716 UNC13AQ9UPW8 1703 aa20.91■□□□□ 0.94
ATG9A-215ENST00000446716 CAGE1Q8TC20 777 aa20.91■□□□□ 0.94
ATG9A-215ENST00000446716 PDIA4P13667 645 aaKnown RBP20.9■□□□□ 0.94
ATG9A-215ENST00000446716 C20orf194Q5TEA3 1177 aa20.9■□□□□ 0.94
ATG9A-215ENST00000446716 ABCC2Q92887 1545 aa20.9■□□□□ 0.94
ATG9A-215ENST00000446716 CCDC192P0DO97 292 aa20.9■□□□□ 0.94
ATG9A-215ENST00000446716 ANKRD18AQ8IVF6 992 aa20.9■□□□□ 0.94
ATG9A-215ENST00000446716 MRE11P49959 708 aa20.9■□□□□ 0.94
ATG9A-215ENST00000446716 IBSPP21815 317 aaPredicted RBP20.89■□□□□ 0.93
ATG9A-215ENST00000446716 RUFY1Q96T51 708 aa20.89■□□□□ 0.93
ATG9A-215ENST00000446716 CEP131Q9UPN4 1083 aa20.89■□□□□ 0.93
ATG9A-215ENST00000446716 HMGB1P09429 215 aaKnown RBP20.89■□□□□ 0.93
ATG9A-215ENST00000446716 CCDC82Q8N4S0 544 aa20.89■□□□□ 0.93
ATG9A-215ENST00000446716 FLT4P35916 1363 aa20.89■□□□□ 0.93
ATG9A-215ENST00000446716 MATR3P43243 847 aaKnown RBP eCLIP20.89■□□□□ 0.93
ATG9A-215ENST00000446716 CHMP4BP1P59074 171 aa20.89■□□□□ 0.93
ATG9A-215ENST00000446716 NIP7Q9Y221 180 aaKnown RBP eCLIP20.89■□□□□ 0.93
ATG9A-215ENST00000446716 SLC12A7Q9Y666 1083 aa20.89■□□□□ 0.93
ATG9A-215ENST00000446716 IFIT3O14879 490 aaKnown RBP20.88■□□□□ 0.93
ATG9A-215ENST00000446716 CEP57L1Q8IYX8 460 aa20.88■□□□□ 0.93
ATG9A-215ENST00000446716 EVI5LQ96CN4 794 aa20.88■□□□□ 0.93
ATG9A-215ENST00000446716 TFCP2L1Q9NZI6 479 aa20.88■□□□□ 0.93
ATG9A-215ENST00000446716 ITSN2Q9NZM3 1697 aa20.88■□□□□ 0.93
ATG9A-215ENST00000446716 MYO1BO43795 1136 aa20.88■□□□□ 0.93
ATG9A-215ENST00000446716 CABP5Q9NP86 173 aa20.88■□□□□ 0.93
ATG9A-215ENST00000446716 HLA-DOAP06340 250 aa20.88■□□□□ 0.93
ATG9A-215ENST00000446716 CCDC83Q8IWF9 413 aa20.88■□□□□ 0.93
ATG9A-215ENST00000446716 ADAMTS12P58397 1594 aa20.87■□□□□ 0.93
ATG9A-215ENST00000446716 KIAA0556O60303 1618 aa20.87■□□□□ 0.93
ATG9A-215ENST00000446716 CUL5Q93034 780 aa20.87■□□□□ 0.93
ATG9A-215ENST00000446716 UQCRFS1P1P0C7P4 283 aa20.87■□□□□ 0.93
ATG9A-215ENST00000446716 NBPF14Q5TI25 921 aa20.87■□□□□ 0.93
ATG9A-215ENST00000446716 SIRT1Q96EB6 747 aa20.86■□□□□ 0.93
ATG9A-215ENST00000446716 POLKQ9UBT6 870 aa20.86■□□□□ 0.93
ATG9A-215ENST00000446716 CCDC39Q9UFE4 941 aa20.86■□□□□ 0.93
ATG9A-215ENST00000446716 RTCBQ9Y3I0 505 aaKnown RBP20.86■□□□□ 0.93
ATG9A-215ENST00000446716 NUP160Q12769 1436 aa20.86■□□□□ 0.93
ATG9A-215ENST00000446716 PTPRKQ15262 1439 aa20.86■□□□□ 0.93
ATG9A-215ENST00000446716 NFATC2IPQ8NCF5 419 aa20.86■□□□□ 0.93
ATG9A-215ENST00000446716 FBXO3Q9UK99 471 aa20.86■□□□□ 0.93
ATG9A-215ENST00000446716 FERMT3Q86UX7 667 aa20.85■□□□□ 0.93
ATG9A-215ENST00000446716 PPFIBP1Q86W92 1011 aa20.85■□□□□ 0.93
ATG9A-215ENST00000446716 BTG4Q9NY30 223 aa20.85■□□□□ 0.93
ATG9A-215ENST00000446716 UHRF1BP1Q6BDS2 1440 aa20.85■□□□□ 0.93
ATG9A-215ENST00000446716 SCLT1Q96NL6 688 aa20.85■□□□□ 0.93
ATG9A-215ENST00000446716 LUC7LQ9NQ29 371 aaKnown RBP20.85■□□□□ 0.93
ATG9A-215ENST00000446716 CDR1P51861 262 aa20.85■□□□□ 0.93
ATG9A-215ENST00000446716 CATIPQ7Z7H3 387 aa20.85■□□□□ 0.93
ATG9A-215ENST00000446716 RALGAPBQ86X10 1494 aa20.85■□□□□ 0.93
ATG9A-215ENST00000446716 DEF6Q9H4E7 631 aa20.84■□□□□ 0.93
ATG9A-215ENST00000446716 POLD1P28340 1107 aa20.84■□□□□ 0.93
ATG9A-215ENST00000446716 PDE4BQ07343 736 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms