RNA–Protein interactions for RNA: ENST00000443560.1

NUCB1-205, Transcript of nucleobindin 1, humanhuman

TSL 4

Gene NUCB1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-205ENST00000443560 COL15A1P39059 1388 aa20.5■□□□□ 0.87
NUCB1-205ENST00000443560 UBR2Q8IWV8 1755 aa20.5■□□□□ 0.87
NUCB1-205ENST00000443560 CYP19A1P11511 503 aaPredicted RBP20.5■□□□□ 0.87
NUCB1-205ENST00000443560 C16orf71Q8IYS4 520 aaPredicted RBP20.5■□□□□ 0.87
NUCB1-205ENST00000443560 RNF181Q9P0P0 153 aa20.5■□□□□ 0.87
NUCB1-205ENST00000443560 DIAPH1O60610 1272 aaKnown RBP20.49■□□□□ 0.87
NUCB1-205ENST00000443560 MTHFSDQ2M296 383 aaKnown RBP20.49■□□□□ 0.87
NUCB1-205ENST00000443560 NARFQ9UHQ1 456 aa20.49■□□□□ 0.87
NUCB1-205ENST00000443560 NRXN2Q9P2S2 1712 aa20.48■□□□□ 0.87
NUCB1-205ENST00000443560 CC2D1BQ5T0F9 858 aaKnown RBP20.48■□□□□ 0.87
NUCB1-205ENST00000443560 ZBTB1Q9Y2K1 713 aa20.48■□□□□ 0.87
NUCB1-205ENST00000443560 DLEC1Q9Y238 1755 aa20.48■□□□□ 0.87
NUCB1-205ENST00000443560 KDM2BQ8NHM5 1336 aa20.48■□□□□ 0.87
NUCB1-205ENST00000443560 TNRC6CQ9HCJ0 1690 aaKnown RBP20.48■□□□□ 0.87
NUCB1-205ENST00000443560 WDR90Q96KV7 1748 aa20.47■□□□□ 0.87
NUCB1-205ENST00000443560 NFIXQ14938 502 aa20.47■□□□□ 0.87
NUCB1-205ENST00000443560 VSIG10Q8N0Z9 540 aa20.47■□□□□ 0.87
NUCB1-205ENST00000443560 RBM46Q8TBY0 533 aaKnown RBP20.47■□□□□ 0.87
NUCB1-205ENST00000443560 CCDC88AQ3V6T2 1871 aa20.45■□□□□ 0.86
NUCB1-205ENST00000443560 TTC5Q8N0Z6 440 aa20.45■□□□□ 0.86
NUCB1-205ENST00000443560 CANXP27824 592 aaKnown RBP20.44■□□□□ 0.86
NUCB1-205ENST00000443560 PER1O15534 1290 aaPredicted RBP20.43■□□□□ 0.86
NUCB1-205ENST00000443560 SERPINB2P05120 415 aa20.43■□□□□ 0.86
NUCB1-205ENST00000443560 STARD3NLO95772 234 aa20.42■□□□□ 0.86
NUCB1-205ENST00000443560 BCL2L12Q9HB09 334 aa20.42■□□□□ 0.86
NUCB1-205ENST00000443560 SIPA1L3O60292 1781 aaPredicted RBP20.41■□□□□ 0.86
NUCB1-205ENST00000443560 U2SURPO15042 1029 aaKnown RBP20.41■□□□□ 0.86
NUCB1-205ENST00000443560 RASSF7Q02833 373 aa20.41■□□□□ 0.86
NUCB1-205ENST00000443560 TEFQ10587 303 aa20.41■□□□□ 0.86
NUCB1-205ENST00000443560 FSTL1Q12841 308 aa20.41■□□□□ 0.86
NUCB1-205ENST00000443560 RRAGCQ9HB90 399 aa20.41■□□□□ 0.86
NUCB1-205ENST00000443560 A0A087WZG4 1122 aa20.4■□□□□ 0.86
NUCB1-205ENST00000443560 COL3A1P02461 1466 aaPredicted RBP20.4■□□□□ 0.86
NUCB1-205ENST00000443560 CNGB1Q14028 1251 aaPredicted RBP20.4■□□□□ 0.86
NUCB1-205ENST00000443560 DNAJC5GQ8N7S2 189 aa20.4■□□□□ 0.86
NUCB1-205ENST00000443560 TTLL6Q8N841 843 aa20.4■□□□□ 0.86
NUCB1-205ENST00000443560 ZC3H4Q9UPT8 1303 aaKnown RBP20.4■□□□□ 0.86
NUCB1-205ENST00000443560 TIAM2Q8IVF5 1701 aa20.39■□□□□ 0.86
NUCB1-205ENST00000443560 SCN7AQ01118 1682 aa20.39■□□□□ 0.86
NUCB1-205ENST00000443560 BICDL1Q6ZP65 573 aa20.39■□□□□ 0.85
NUCB1-205ENST00000443560 C2CD5Q86YS7 1000 aa20.39■□□□□ 0.85
NUCB1-205ENST00000443560 GAS2L2Q8NHY3 880 aa20.39■□□□□ 0.85
NUCB1-205ENST00000443560 CARMIL3Q8ND23 1372 aa20.38■□□□□ 0.85
NUCB1-205ENST00000443560 GNAT3A8MTJ3 354 aa20.38■□□□□ 0.85
NUCB1-205ENST00000443560 H0YIN7 160 aa20.38■□□□□ 0.85
NUCB1-205ENST00000443560 LMNB1P20700 586 aa20.38■□□□□ 0.85
NUCB1-205ENST00000443560 EIF5P55010 431 aaKnown RBP20.38■□□□□ 0.85
NUCB1-205ENST00000443560 ZNF330Q9Y3S2 320 aaPredicted RBP20.38■□□□□ 0.85
NUCB1-205ENST00000443560 ANKRD31Q8N7Z5 1873 aa20.38■□□□□ 0.85
NUCB1-205ENST00000443560 NPC1L1Q9UHC9 1359 aa20.37■□□□□ 0.85
NUCB1-205ENST00000443560 HEG1Q9ULI3 1381 aa20.37■□□□□ 0.85
NUCB1-205ENST00000443560 ZNF790Q6PG37 636 aa20.37■□□□□ 0.85
NUCB1-205ENST00000443560 ZNF496Q96IT1 587 aaPredicted RBP20.37■□□□□ 0.85
NUCB1-205ENST00000443560 TEX13AQ9BXU3 409 aaPredicted RBP20.37■□□□□ 0.85
NUCB1-205ENST00000443560 HTRA3P83110 453 aa20.35■□□□□ 0.85
NUCB1-205ENST00000443560 NPM2Q86SE8 214 aaKnown RBP20.35■□□□□ 0.85
NUCB1-205ENST00000443560 SMC1BQ8NDV3 1235 aa20.35■□□□□ 0.85
NUCB1-205ENST00000443560 IL17REQ8NFR9 667 aa20.35■□□□□ 0.85
NUCB1-205ENST00000443560 DICER1Q9UPY3 1922 aaKnown RBP20.34■□□□□ 0.85
NUCB1-205ENST00000443560 TBC1D9BQ66K14 1250 aa20.34■□□□□ 0.85
NUCB1-205ENST00000443560 KLRG1Q96E93 195 aa20.34■□□□□ 0.85
NUCB1-205ENST00000443560 CACNA1SQ13698 1873 aa20.34■□□□□ 0.85
NUCB1-205ENST00000443560 COL11A2P13942 1736 aaPredicted RBP20.33■□□□□ 0.85
NUCB1-205ENST00000443560 ZNF622Q969S3 477 aaKnown RBP eCLIP20.33■□□□□ 0.85
NUCB1-205ENST00000443560 FMNL2Q96PY5 1086 aa20.33■□□□□ 0.85
NUCB1-205ENST00000443560 TBC1D2BQ9UPU7 963 aa20.33■□□□□ 0.85
NUCB1-205ENST00000443560 GLTPD2A6NH11 291 aa20.32■□□□□ 0.84
NUCB1-205ENST00000443560 PDE6BP35913 854 aa20.32■□□□□ 0.84
NUCB1-205ENST00000443560 IL6STP40189 918 aaPredicted RBP20.32■□□□□ 0.84
NUCB1-205ENST00000443560 PDZRN3Q9UPQ7 1066 aa20.32■□□□□ 0.84
NUCB1-205ENST00000443560 FER1L6Q2WGJ9 1857 aa20.32■□□□□ 0.84
NUCB1-205ENST00000443560 NFKBIEO00221 500 aa20.31■□□□□ 0.84
NUCB1-205ENST00000443560 VEGFAP15692 232 aaPredicted RBP20.31■□□□□ 0.84
NUCB1-205ENST00000443560 PRELPP51888 382 aa20.31■□□□□ 0.84
NUCB1-205ENST00000443560 BRIP1Q9BX63 1249 aa20.31■□□□□ 0.84
NUCB1-205ENST00000443560 BCORQ6W2J9 1755 aa20.31■□□□□ 0.84
NUCB1-205ENST00000443560 NPHP1O15259 732 aa20.3■□□□□ 0.84
NUCB1-205ENST00000443560 PRR5LQ6MZQ0 368 aa20.3■□□□□ 0.84
NUCB1-205ENST00000443560 CFAP53Q96M91 514 aa20.3■□□□□ 0.84
NUCB1-205ENST00000443560 CEMIPQ8WUJ3 1361 aa20.3■□□□□ 0.84
NUCB1-205ENST00000443560 BTBD11A6QL63 1104 aa20.29■□□□□ 0.84
NUCB1-205ENST00000443560 A1BGP04217 495 aa20.29■□□□□ 0.84
NUCB1-205ENST00000443560 PRKAR2BP31323 418 aa20.29■□□□□ 0.84
NUCB1-205ENST00000443560 CCDC24Q8N4L8 307 aa20.29■□□□□ 0.84
NUCB1-205ENST00000443560 SETDB2Q96T68 719 aa20.29■□□□□ 0.84
NUCB1-205ENST00000443560 ZNF219Q9P2Y4 722 aaPredicted RBP20.29■□□□□ 0.84
NUCB1-205ENST00000443560 CNBD1Q8NA66 436 aa20.28■□□□□ 0.84
NUCB1-205ENST00000443560 ARFGEF2Q9Y6D5 1785 aa20.27■□□□□ 0.84
NUCB1-205ENST00000443560 C21orf2O43822 256 aa20.27■□□□□ 0.84
NUCB1-205ENST00000443560 CAMTA2O94983 1202 aa20.27■□□□□ 0.84
NUCB1-205ENST00000443560 ST5P78524 1137 aa20.27■□□□□ 0.84
NUCB1-205ENST00000443560 DPY19L2Q6NUT2 758 aa20.27■□□□□ 0.84
NUCB1-205ENST00000443560 JMYQ8N9B5 988 aa20.27■□□□□ 0.84
NUCB1-205ENST00000443560 PHACTR3Q96KR7 559 aa20.27■□□□□ 0.84
NUCB1-205ENST00000443560 SLX4Q8IY92 1834 aa20.27■□□□□ 0.84
NUCB1-205ENST00000443560 PCNTO95613 3336 aa20.27■□□□□ 0.83
NUCB1-205ENST00000443560 KCNQ3O43525 872 aa20.26■□□□□ 0.83
NUCB1-205ENST00000443560 RSPH6AQ9H0K4 717 aa20.26■□□□□ 0.83
NUCB1-205ENST00000443560 NUDCQ9Y266 331 aa20.26■□□□□ 0.83
NUCB1-205ENST00000443560 DZIP3Q86Y13 1208 aaKnown RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms