RNA–Protein interactions for RNA: ENST00000441867.5

ABCF1-203, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 5

Gene ABCF1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-203ENST00000441867 PLEKHO1Q53GL0 409 aaPredicted RBP12.74□□□□□ -0.37
ABCF1-203ENST00000441867 ARFGEF1Q9Y6D6 1849 aa12.74□□□□□ -0.37
ABCF1-203ENST00000441867 PTCD1O75127 700 aaKnown RBP12.73□□□□□ -0.37
ABCF1-203ENST00000441867 TTLL6Q8N841 843 aa12.73□□□□□ -0.37
ABCF1-203ENST00000441867 MKRN1Q9UHC7 482 aaKnown RBP12.73□□□□□ -0.37
ABCF1-203ENST00000441867 AMOTQ4VCS5 1084 aa12.72□□□□□ -0.37
ABCF1-203ENST00000441867 CHADLQ6NUI6 762 aa12.72□□□□□ -0.37
ABCF1-203ENST00000441867 AIDAQ96BJ3 306 aa12.72□□□□□ -0.37
ABCF1-203ENST00000441867 ABHD8Q96I13 439 aa12.72□□□□□ -0.37
ABCF1-203ENST00000441867 CARD14Q9BXL6 1004 aa12.72□□□□□ -0.37
ABCF1-203ENST00000441867 ZNF831Q5JPB2 1677 aa12.72□□□□□ -0.37
ABCF1-203ENST00000441867 BRCA1P38398 1863 aaKnown RBP12.72□□□□□ -0.37
ABCF1-203ENST00000441867 CTCFP49711 727 aaPredicted RBP12.71□□□□□ -0.37
ABCF1-203ENST00000441867 MTHFSP49914 203 aa12.71□□□□□ -0.37
ABCF1-203ENST00000441867 POLKQ9UBT6 870 aa12.71□□□□□ -0.37
ABCF1-203ENST00000441867 POTECB2RU33 542 aa12.7□□□□□ -0.38
ABCF1-203ENST00000441867 H0YIN7 160 aa12.7□□□□□ -0.38
ABCF1-203ENST00000441867 EIF4A2Q14240 407 aaKnown RBP12.7□□□□□ -0.38
ABCF1-203ENST00000441867 ZNF530Q6P9A1 599 aaPredicted RBP12.7□□□□□ -0.38
ABCF1-203ENST00000441867 INTS5Q6P9B9 1019 aaKnown RBP12.7□□□□□ -0.38
ABCF1-203ENST00000441867 C1orf141Q5JVX7 400 aa12.69□□□□□ -0.38
ABCF1-203ENST00000441867 USPL1Q5W0Q7 1092 aa12.69□□□□□ -0.38
ABCF1-203ENST00000441867 C2CD5Q86YS7 1000 aa12.69□□□□□ -0.38
ABCF1-203ENST00000441867 NFATC2IPQ8NCF5 419 aa12.69□□□□□ -0.38
ABCF1-203ENST00000441867 PDZRN3Q9UPQ7 1066 aa12.69□□□□□ -0.38
ABCF1-203ENST00000441867 CCDC85CA6NKD9 419 aa12.68□□□□□ -0.38
ABCF1-203ENST00000441867 NFKBIEO00221 500 aa12.68□□□□□ -0.38
ABCF1-203ENST00000441867 MYCNP04198 464 aaPredicted RBP12.68□□□□□ -0.38
ABCF1-203ENST00000441867 LBX1P52954 281 aa12.68□□□□□ -0.38
ABCF1-203ENST00000441867 NFIXQ14938 502 aa12.68□□□□□ -0.38
ABCF1-203ENST00000441867 NARFQ9UHQ1 456 aa12.68□□□□□ -0.38
ABCF1-203ENST00000441867 CNTNAP1P78357 1384 aa12.68□□□□□ -0.38
ABCF1-203ENST00000441867 SERPINB2P05120 415 aa12.67□□□□□ -0.38
ABCF1-203ENST00000441867 ATXN8OSP0DMR3 200 aa12.67□□□□□ -0.38
ABCF1-203ENST00000441867 RGS19P49795 217 aa12.67□□□□□ -0.38
ABCF1-203ENST00000441867 ERFEQ4G0M1 354 aa12.67□□□□□ -0.38
ABCF1-203ENST00000441867 SOS1Q07889 1333 aaPredicted RBP12.66□□□□□ -0.38
ABCF1-203ENST00000441867 IQCA1LA6NCM1 817 aa12.66□□□□□ -0.38
ABCF1-203ENST00000441867 COL5A3P25940 1745 aaPredicted RBP12.65□□□□□ -0.38
ABCF1-203ENST00000441867 SBF1O95248 1867 aa12.65□□□□□ -0.38
ABCF1-203ENST00000441867 LTBP3Q9NS15 1303 aa12.64□□□□□ -0.39
ABCF1-203ENST00000441867 PDE6BP35913 854 aa12.64□□□□□ -0.39
ABCF1-203ENST00000441867 LDHDQ86WU2 507 aa12.64□□□□□ -0.39
ABCF1-203ENST00000441867 DNAJC10Q8IXB1 793 aa12.64□□□□□ -0.39
ABCF1-203ENST00000441867 WBP1LQ9NX94 342 aa12.64□□□□□ -0.39
ABCF1-203ENST00000441867 KIF20BQ96Q89 1820 aa12.64□□□□□ -0.39
ABCF1-203ENST00000441867 TMEM88BA6NKF7 163 aa12.63□□□□□ -0.39
ABCF1-203ENST00000441867 CYP19A1P11511 503 aaPredicted RBP12.63□□□□□ -0.39
ABCF1-203ENST00000441867 VEGFBP49765 207 aa12.63□□□□□ -0.39
ABCF1-203ENST00000441867 SOGA3Q5TF21 947 aa12.63□□□□□ -0.39
ABCF1-203ENST00000441867 ZNF622Q969S3 477 aaKnown RBP eCLIP12.63□□□□□ -0.392e-8■■■■□ 24.2
ABCF1-203ENST00000441867 BRIP1Q9BX63 1249 aa12.63□□□□□ -0.39
ABCF1-203ENST00000441867 TAOK3Q9H2K8 898 aa12.63□□□□□ -0.39
ABCF1-203ENST00000441867 MYH14Q7Z406 1995 aaKnown RBP12.63□□□□□ -0.39
ABCF1-203ENST00000441867 PASKQ96RG2 1323 aa12.62□□□□□ -0.39
ABCF1-203ENST00000441867 COL15A1P39059 1388 aa12.62□□□□□ -0.39
ABCF1-203ENST00000441867 C21orf2O43822 256 aa12.62□□□□□ -0.39
ABCF1-203ENST00000441867 TNNT2P45379 298 aaPredicted RBP12.62□□□□□ -0.39
ABCF1-203ENST00000441867 BCL2L12Q9HB09 334 aa12.62□□□□□ -0.39
ABCF1-203ENST00000441867 ANKRD26Q9UPS8 1709 aa12.62□□□□□ -0.39
ABCF1-203ENST00000441867 A0A087WZG4 1122 aa12.61□□□□□ -0.39
ABCF1-203ENST00000441867 DDNO94850 711 aaPredicted RBP12.61□□□□□ -0.39
ABCF1-203ENST00000441867 MAP2K1Q02750 393 aaPredicted RBP12.61□□□□□ -0.39
ABCF1-203ENST00000441867 POTEIP0CG38 1075 aa12.6□□□□□ -0.39
ABCF1-203ENST00000441867 POTEJP0CG39 1038 aa12.6□□□□□ -0.39
ABCF1-203ENST00000441867 VSIG10Q8N0Z9 540 aa12.6□□□□□ -0.39
ABCF1-203ENST00000441867 CNKSR1Q969H4 720 aa12.6□□□□□ -0.39
ABCF1-203ENST00000441867 L3MBTL3Q96JM7 780 aaPredicted RBP12.6□□□□□ -0.39
ABCF1-203ENST00000441867 TAF1DQ9H5J8 278 aaPredicted RBP12.6□□□□□ -0.39
ABCF1-203ENST00000441867 SLC52A2Q9HAB3 445 aa12.6□□□□□ -0.39
ABCF1-203ENST00000441867 STARD3NLO95772 234 aa12.59□□□□□ -0.39
ABCF1-203ENST00000441867 ITGBL1O95965 494 aaPredicted RBP12.59□□□□□ -0.39
ABCF1-203ENST00000441867 HSPA8P11142 646 aaKnown RBP12.59□□□□□ -0.39
ABCF1-203ENST00000441867 AKAP4Q5JQC9 854 aa12.59□□□□□ -0.39
ABCF1-203ENST00000441867 CFAP44Q96MT7 982 aa12.59□□□□□ -0.39
ABCF1-203ENST00000441867 ZNF219Q9P2Y4 722 aaPredicted RBP12.59□□□□□ -0.39
ABCF1-203ENST00000441867 ZBTB1Q9Y2K1 713 aa12.59□□□□□ -0.39
ABCF1-203ENST00000441867 RASSF10A6NK89 507 aa12.58□□□□□ -0.4
ABCF1-203ENST00000441867 DEFB115Q30KQ5 88 aa12.58□□□□□ -0.4
ABCF1-203ENST00000441867 SULT6B1Q6IMI4 303 aa12.58□□□□□ -0.4
ABCF1-203ENST00000441867 STYK1Q6J9G0 422 aa12.58□□□□□ -0.4
ABCF1-203ENST00000441867 BICDL1Q6ZP65 573 aa12.58□□□□□ -0.4
ABCF1-203ENST00000441867 PNMA8AQ86V59 439 aaPredicted RBP12.58□□□□□ -0.4
ABCF1-203ENST00000441867 AEBP1Q8IUX7 1158 aa12.58□□□□□ -0.4
ABCF1-203ENST00000441867 TNRC18O15417 2968 aaPredicted RBP12.58□□□□□ -0.4
ABCF1-203ENST00000441867 CARMIL3Q8ND23 1372 aa12.57□□□□□ -0.4
ABCF1-203ENST00000441867 HACL1Q9UJ83 578 aa12.57□□□□□ -0.4
ABCF1-203ENST00000441867 TIAM2Q8IVF5 1701 aa12.57□□□□□ -0.4
ABCF1-203ENST00000441867 CANXP27824 592 aaKnown RBP12.56□□□□□ -0.4
ABCF1-203ENST00000441867 EIF5P55010 431 aaKnown RBP12.56□□□□□ -0.4
ABCF1-203ENST00000441867 EAPPQ56P03 285 aaPredicted RBP12.56□□□□□ -0.4
ABCF1-203ENST00000441867 PRR5LQ6MZQ0 368 aa12.56□□□□□ -0.4
ABCF1-203ENST00000441867 BEGAINQ9BUH8 593 aa12.56□□□□□ -0.4
ABCF1-203ENST00000441867 CLEC11AQ9Y240 323 aa12.56□□□□□ -0.4
ABCF1-203ENST00000441867 ADAMTS7Q9UKP4 1686 aa12.56□□□□□ -0.4
ABCF1-203ENST00000441867 NRXN2Q9P2S2 1712 aa12.56□□□□□ -0.4
ABCF1-203ENST00000441867 TJP1Q07157 1748 aa12.55□□□□□ -0.4
ABCF1-203ENST00000441867 NPHP1O15259 732 aa12.55□□□□□ -0.4
ABCF1-203ENST00000441867 SLC39A6Q13433 755 aa12.55□□□□□ -0.4
ABCF1-203ENST00000441867 TBC1D9BQ66K14 1250 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms