RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 NRXN2Q9P2S2 1712 aa13.76□□□□□ -0.21
SYN3-204ENST00000441821 NFIXQ14938 502 aa13.76□□□□□ -0.21
SYN3-204ENST00000441821 NARFQ9UHQ1 456 aa13.76□□□□□ -0.21
SYN3-204ENST00000441821 AFDNP55196 1824 aaKnown RBP13.76□□□□□ -0.21
SYN3-204ENST00000441821 DLEC1Q9Y238 1755 aa13.76□□□□□ -0.21
SYN3-204ENST00000441821 TIAM2Q8IVF5 1701 aa13.76□□□□□ -0.21
SYN3-204ENST00000441821 DPY19L2Q6NUT2 758 aa13.75□□□□□ -0.21
SYN3-204ENST00000441821 DNAJC10Q8IXB1 793 aa13.75□□□□□ -0.21
SYN3-204ENST00000441821 H0YIN7 160 aa13.74□□□□□ -0.21
SYN3-204ENST00000441821 NFKBIEO00221 500 aa13.74□□□□□ -0.21
SYN3-204ENST00000441821 SERPINB2P05120 415 aa13.74□□□□□ -0.21
SYN3-204ENST00000441821 CYP19A1P11511 503 aaPredicted RBP13.74□□□□□ -0.21
SYN3-204ENST00000441821 C2CD5Q86YS7 1000 aa13.74□□□□□ -0.21
SYN3-204ENST00000441821 AEBP1Q8IUX7 1158 aa13.74□□□□□ -0.21
SYN3-204ENST00000441821 CREBZFQ9NS37 354 aa13.74□□□□□ -0.21
SYN3-204ENST00000441821 BCL2L12Q9HB09 334 aa13.73□□□□□ -0.21
SYN3-204ENST00000441821 CCDC88AQ3V6T2 1871 aa13.73□□□□□ -0.21
SYN3-204ENST00000441821 SCN11AQ9UI33 1791 aa13.73□□□□□ -0.21
SYN3-204ENST00000441821 COL15A1P39059 1388 aa13.72□□□□□ -0.21
SYN3-204ENST00000441821 SULT6B1Q6IMI4 303 aa13.72□□□□□ -0.21
SYN3-204ENST00000441821 SLC52A2Q9HAB3 445 aa13.72□□□□□ -0.21
SYN3-204ENST00000441821 AKAP4Q5JQC9 854 aa13.71□□□□□ -0.21
SYN3-204ENST00000441821 CHADLQ6NUI6 762 aa13.71□□□□□ -0.21
SYN3-204ENST00000441821 PDZRN3Q9UPQ7 1066 aa13.71□□□□□ -0.21
SYN3-204ENST00000441821 ZBTB1Q9Y2K1 713 aa13.71□□□□□ -0.21
SYN3-204ENST00000441821 ERFEQ4G0M1 354 aa13.7□□□□□ -0.22
SYN3-204ENST00000441821 VSIG10Q8N0Z9 540 aa13.7□□□□□ -0.22
SYN3-204ENST00000441821 PRDM10Q9NQV6 1147 aa13.7□□□□□ -0.22
SYN3-204ENST00000441821 MKRN1Q9UHC7 482 aaKnown RBP13.7□□□□□ -0.22
SYN3-204ENST00000441821 CARMIL3Q8ND23 1372 aa13.7□□□□□ -0.22
SYN3-204ENST00000441821 LGR6Q9HBX8 967 aa13.69□□□□□ -0.22
SYN3-204ENST00000441821 DICER1Q9UPY3 1922 aaKnown RBP13.68□□□□□ -0.22
SYN3-204ENST00000441821 MRC1P22897 1456 aa13.68□□□□□ -0.22
SYN3-204ENST00000441821 FOXN1O15353 648 aa13.68□□□□□ -0.22
SYN3-204ENST00000441821 C21orf2O43822 256 aa13.68□□□□□ -0.22
SYN3-204ENST00000441821 PDE6BP35913 854 aa13.68□□□□□ -0.22
SYN3-204ENST00000441821 SLC39A6Q13433 755 aa13.68□□□□□ -0.22
SYN3-204ENST00000441821 ZNF622Q969S3 477 aaKnown RBP eCLIP13.68□□□□□ -0.22
SYN3-204ENST00000441821 POLR3GLQ9BT43 218 aa13.68□□□□□ -0.22
SYN3-204ENST00000441821 BRIP1Q9BX63 1249 aa13.68□□□□□ -0.22
SYN3-204ENST00000441821 CNTNAP1P78357 1384 aa13.68□□□□□ -0.22
SYN3-204ENST00000441821 LTBP3Q9NS15 1303 aa13.67□□□□□ -0.22
SYN3-204ENST00000441821 IL13P35225 146 aa13.67□□□□□ -0.22
SYN3-204ENST00000441821 FER1L6Q2WGJ9 1857 aa13.67□□□□□ -0.22
SYN3-204ENST00000441821 A0A087WZG4 1122 aa13.66□□□□□ -0.22
SYN3-204ENST00000441821 RNMTO43148 476 aaKnown RBP13.66□□□□□ -0.22
SYN3-204ENST00000441821 DDNO94850 711 aaPredicted RBP13.66□□□□□ -0.22
SYN3-204ENST00000441821 POTEIP0CG38 1075 aa13.66□□□□□ -0.22
SYN3-204ENST00000441821 POTEJP0CG39 1038 aa13.66□□□□□ -0.22
SYN3-204ENST00000441821 CANXP27824 592 aaKnown RBP13.66□□□□□ -0.22
SYN3-204ENST00000441821 EIF5P55010 431 aaKnown RBP13.66□□□□□ -0.22
SYN3-204ENST00000441821 BICDL1Q6ZP65 573 aa13.66□□□□□ -0.22
SYN3-204ENST00000441821 MORC1Q86VD1 984 aa13.66□□□□□ -0.22
SYN3-204ENST00000441821 TAOK3Q9H2K8 898 aa13.66□□□□□ -0.22
SYN3-204ENST00000441821 PANK3Q9H999 370 aa13.66□□□□□ -0.22
SYN3-204ENST00000441821 PASKQ96RG2 1323 aa13.65□□□□□ -0.22
SYN3-204ENST00000441821 STARD3NLO95772 234 aa13.65□□□□□ -0.22
SYN3-204ENST00000441821 CTCFP49711 727 aaPredicted RBP13.65□□□□□ -0.22
SYN3-204ENST00000441821 LDHDQ86WU2 507 aa13.65□□□□□ -0.22
SYN3-204ENST00000441821 ZNF219Q9P2Y4 722 aaPredicted RBP13.65□□□□□ -0.22
SYN3-204ENST00000441821 ANKRD31Q8N7Z5 1873 aa13.65□□□□□ -0.22
SYN3-204ENST00000441821 IQCA1LA6NCM1 817 aa13.64□□□□□ -0.23
SYN3-204ENST00000441821 SLC34A2O95436 690 aa13.64□□□□□ -0.23
SYN3-204ENST00000441821 TBC1D9BQ66K14 1250 aa13.64□□□□□ -0.23
SYN3-204ENST00000441821 PRR5LQ6MZQ0 368 aa13.64□□□□□ -0.23
SYN3-204ENST00000441821 AIDAQ96BJ3 306 aa13.64□□□□□ -0.23
SYN3-204ENST00000441821 VEGFBP49765 207 aa13.63□□□□□ -0.23
SYN3-204ENST00000441821 SOGA3Q5TF21 947 aa13.63□□□□□ -0.23
SYN3-204ENST00000441821 CNKSR1Q969H4 720 aa13.63□□□□□ -0.23
SYN3-204ENST00000441821 L3MBTL3Q96JM7 780 aaPredicted RBP13.63□□□□□ -0.23
SYN3-204ENST00000441821 COL11A2P13942 1736 aaPredicted RBP13.63□□□□□ -0.23
SYN3-204ENST00000441821 TMEM88BA6NKF7 163 aa13.62□□□□□ -0.23
SYN3-204ENST00000441821 STYK1Q6J9G0 422 aa13.62□□□□□ -0.23
SYN3-204ENST00000441821 TAF1DQ9H5J8 278 aaPredicted RBP13.62□□□□□ -0.23
SYN3-204ENST00000441821 WBP1LQ9NX94 342 aa13.62□□□□□ -0.23
SYN3-204ENST00000441821 TIMELESSQ9UNS1 1208 aa13.62□□□□□ -0.23
SYN3-204ENST00000441821 UBR2Q8IWV8 1755 aa13.62□□□□□ -0.23
SYN3-204ENST00000441821 SCN4AP35499 1836 aa13.62□□□□□ -0.23
SYN3-204ENST00000441821 VIRMAQ69YN4 1812 aaKnown RBP13.62□□□□□ -0.23
SYN3-204ENST00000441821 SCN7AQ01118 1682 aa13.61□□□□□ -0.23
SYN3-204ENST00000441821 ITGBL1O95965 494 aaPredicted RBP13.61□□□□□ -0.23
SYN3-204ENST00000441821 SRGNP10124 158 aa13.61□□□□□ -0.23
SYN3-204ENST00000441821 MTHFSDQ2M296 383 aaKnown RBP13.61□□□□□ -0.23
SYN3-204ENST00000441821 PRPF40BQ6NWY9 871 aaKnown RBP13.61□□□□□ -0.23
SYN3-204ENST00000441821 CCDC24Q8N4L8 307 aa13.61□□□□□ -0.23
SYN3-204ENST00000441821 LBX1P52954 281 aa13.6□□□□□ -0.23
SYN3-204ENST00000441821 TTC5Q8N0Z6 440 aa13.6□□□□□ -0.23
SYN3-204ENST00000441821 CNBD1Q8NA66 436 aa13.6□□□□□ -0.23
SYN3-204ENST00000441821 MASTLQ96GX5 879 aa13.6□□□□□ -0.23
SYN3-204ENST00000441821 SETDB2Q96T68 719 aa13.6□□□□□ -0.23
SYN3-204ENST00000441821 TEX13AQ9BXU3 409 aaPredicted RBP13.6□□□□□ -0.23
SYN3-204ENST00000441821 TBC1D2BQ9UPU7 963 aa13.6□□□□□ -0.23
SYN3-204ENST00000441821 SLX4Q8IY92 1834 aa13.6□□□□□ -0.23
SYN3-204ENST00000441821 IL6STP40189 918 aaPredicted RBP13.59□□□□□ -0.23
SYN3-204ENST00000441821 ST5P78524 1137 aa13.59□□□□□ -0.23
SYN3-204ENST00000441821 ARFGEF2Q9Y6D5 1785 aa13.58□□□□□ -0.23
SYN3-204ENST00000441821 RASSF10A6NK89 507 aa13.58□□□□□ -0.24
SYN3-204ENST00000441821 HMOX1P09601 288 aa13.58□□□□□ -0.24
SYN3-204ENST00000441821 C7orf43Q8WVR3 580 aa13.58□□□□□ -0.24
SYN3-204ENST00000441821 ZNF496Q96IT1 587 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms