RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 DPEP1P16444 411 aa8.09□□□□□ -1.11
PTPRR-204ENST00000440835 BCS1LQ9Y276 419 aa8.09□□□□□ -1.11
PTPRR-204ENST00000440835 KCPQ6ZWJ8 1503 aa8.09□□□□□ -1.11
PTPRR-204ENST00000440835 AFDNP55196 1824 aaKnown RBP8.08□□□□□ -1.12
PTPRR-204ENST00000440835 SULT6B1Q6IMI4 303 aa8.08□□□□□ -1.12
PTPRR-204ENST00000440835 ARHGAP27Q6ZUM4 889 aa8.08□□□□□ -1.12
PTPRR-204ENST00000440835 NFATC2IPQ8NCF5 419 aa8.08□□□□□ -1.12
PTPRR-204ENST00000440835 NARFQ9UHQ1 456 aa8.08□□□□□ -1.12
PTPRR-204ENST00000440835 SIPA1L3O60292 1781 aaPredicted RBP8.08□□□□□ -1.12
PTPRR-204ENST00000440835 KCNA3P22001 575 aa8.08□□□□□ -1.12
PTPRR-204ENST00000440835 INTS5Q6P9B9 1019 aaKnown RBP8.08□□□□□ -1.12
PTPRR-204ENST00000440835 C16orf71Q8IYS4 520 aaPredicted RBP8.08□□□□□ -1.12
PTPRR-204ENST00000440835 SCN7AQ01118 1682 aa8.07□□□□□ -1.12
PTPRR-204ENST00000440835 ARFGEF2Q9Y6D5 1785 aa8.07□□□□□ -1.12
PTPRR-204ENST00000440835 A0A0G2JLW4 131 aa8.07□□□□□ -1.12
PTPRR-204ENST00000440835 POLRMTO00411 1230 aaKnown RBP8.07□□□□□ -1.12
PTPRR-204ENST00000440835 RNMTO43148 476 aaKnown RBP8.07□□□□□ -1.12
PTPRR-204ENST00000440835 TNNT2P45379 298 aaPredicted RBP8.07□□□□□ -1.12
PTPRR-204ENST00000440835 PODXL2Q9NZ53 605 aa8.07□□□□□ -1.12
PTPRR-204ENST00000440835 STARD3NLO95772 234 aa8.07□□□□□ -1.12
PTPRR-204ENST00000440835 CYP19A1P11511 503 aaPredicted RBP8.07□□□□□ -1.12
PTPRR-204ENST00000440835 TAOK2Q9UL54 1235 aa8.07□□□□□ -1.12
PTPRR-204ENST00000440835 DICER1Q9UPY3 1922 aaKnown RBP8.07□□□□□ -1.12
PTPRR-204ENST00000440835 COL15A1P39059 1388 aa8.06□□□□□ -1.12
PTPRR-204ENST00000440835 DIAPH1O60610 1272 aaKnown RBP8.06□□□□□ -1.12
PTPRR-204ENST00000440835 C9orf131Q5VYM1 1079 aa8.06□□□□□ -1.12
PTPRR-204ENST00000440835 GAS2L2Q8NHY3 880 aa8.06□□□□□ -1.12
PTPRR-204ENST00000440835 AEBP1Q8IUX7 1158 aa8.06□□□□□ -1.12
PTPRR-204ENST00000440835 POLR3GLQ9BT43 218 aa8.06□□□□□ -1.12
PTPRR-204ENST00000440835 PTCD1O75127 700 aaKnown RBP8.05□□□□□ -1.12
PTPRR-204ENST00000440835 DDR1Q08345 913 aa8.05□□□□□ -1.12
PTPRR-204ENST00000440835 FKBP8Q14318 412 aa8.05□□□□□ -1.12
PTPRR-204ENST00000440835 SOGA3Q5TF21 947 aa8.05□□□□□ -1.12
PTPRR-204ENST00000440835 LMNB1P20700 586 aa8.05□□□□□ -1.12
PTPRR-204ENST00000440835 JMYQ8N9B5 988 aa8.05□□□□□ -1.12
PTPRR-204ENST00000440835 SMC1BQ8NDV3 1235 aa8.05□□□□□ -1.12
PTPRR-204ENST00000440835 BCORQ6W2J9 1755 aa8.05□□□□□ -1.12
PTPRR-204ENST00000440835 TIAM2Q8IVF5 1701 aa8.05□□□□□ -1.12
PTPRR-204ENST00000440835 COL3A1P02461 1466 aaPredicted RBP8.04□□□□□ -1.12
PTPRR-204ENST00000440835 LTBP3Q9NS15 1303 aa8.04□□□□□ -1.12
PTPRR-204ENST00000440835 TTC5Q8N0Z6 440 aa8.04□□□□□ -1.12
PTPRR-204ENST00000440835 DNAJC5GQ8N7S2 189 aa8.04□□□□□ -1.12
PTPRR-204ENST00000440835 ZNF526Q8TF50 670 aaPredicted RBP8.04□□□□□ -1.12
PTPRR-204ENST00000440835 PDE6BP35913 854 aa8.04□□□□□ -1.12
PTPRR-204ENST00000440835 SMIM5Q71RC9 77 aa8.04□□□□□ -1.12
PTPRR-204ENST00000440835 DNAJC10Q8IXB1 793 aa8.04□□□□□ -1.12
PTPRR-204ENST00000440835 TTLL6Q8N841 843 aa8.04□□□□□ -1.12
PTPRR-204ENST00000440835 H0YIN7 160 aa8.03□□□□□ -1.12
PTPRR-204ENST00000440835 PER1O15534 1290 aaPredicted RBP8.03□□□□□ -1.12
PTPRR-204ENST00000440835 RNF181Q9P0P0 153 aa8.03□□□□□ -1.12
PTPRR-204ENST00000440835 SRP68Q9UHB9 627 aaKnown RBP8.03□□□□□ -1.12
PTPRR-204ENST00000440835 FER1L6Q2WGJ9 1857 aa8.03□□□□□ -1.12
PTPRR-204ENST00000440835 HEG1Q9ULI3 1381 aa8.03□□□□□ -1.12
PTPRR-204ENST00000440835 IL6STP40189 918 aaPredicted RBP8.03□□□□□ -1.12
PTPRR-204ENST00000440835 EIF5P55010 431 aaKnown RBP8.03□□□□□ -1.12
PTPRR-204ENST00000440835 USPL1Q5W0Q7 1092 aa8.03□□□□□ -1.12
PTPRR-204ENST00000440835 UBE2Q2Q8WVN8 375 aa8.03□□□□□ -1.12
PTPRR-204ENST00000440835 CARMIL3Q8ND23 1372 aa8.03□□□□□ -1.12
PTPRR-204ENST00000440835 KIF7Q2M1P5 1343 aa8.03□□□□□ -1.12
PTPRR-204ENST00000440835 GNAT3A8MTJ3 354 aa8.02□□□□□ -1.12
PTPRR-204ENST00000440835 HTATSF1O43719 755 aaKnown RBP8.02□□□□□ -1.12
PTPRR-204ENST00000440835 SERPINB2P05120 415 aa8.02□□□□□ -1.12
PTPRR-204ENST00000440835 NFIXQ14938 502 aa8.02□□□□□ -1.12
PTPRR-204ENST00000440835 KLRG1Q96E93 195 aa8.02□□□□□ -1.12
PTPRR-204ENST00000440835 BRIP1Q9BX63 1249 aa8.02□□□□□ -1.12
PTPRR-204ENST00000440835 CEMIPQ8WUJ3 1361 aa8.02□□□□□ -1.13
PTPRR-204ENST00000440835 GLTPD2A6NH11 291 aa8.02□□□□□ -1.13
PTPRR-204ENST00000440835 MTHFSDQ2M296 383 aaKnown RBP8.02□□□□□ -1.13
PTPRR-204ENST00000440835 CFAP53Q96M91 514 aa8.02□□□□□ -1.13
PTPRR-204ENST00000440835 ANKRD31Q8N7Z5 1873 aa8.02□□□□□ -1.13
PTPRR-204ENST00000440835 CCDC88AQ3V6T2 1871 aa8.02□□□□□ -1.13
PTPRR-204ENST00000440835 VEGFAP15692 232 aaPredicted RBP8.02□□□□□ -1.13
PTPRR-204ENST00000440835 KCNA4P22459 653 aa8.02□□□□□ -1.13
PTPRR-204ENST00000440835 TEFQ10587 303 aa8.02□□□□□ -1.13
PTPRR-204ENST00000440835 STYK1Q6J9G0 422 aa8.02□□□□□ -1.13
PTPRR-204ENST00000440835 FMNL2Q96PY5 1086 aa8.02□□□□□ -1.13
PTPRR-204ENST00000440835 NMRK2Q9NPI5 230 aa8.02□□□□□ -1.13
PTPRR-204ENST00000440835 CLEC4GQ6UXB4 293 aa8.01□□□□□ -1.13
PTPRR-204ENST00000440835 NPM2Q86SE8 214 aaKnown RBP8.01□□□□□ -1.13
PTPRR-204ENST00000440835 C2CD5Q86YS7 1000 aa8.01□□□□□ -1.13
PTPRR-204ENST00000440835 LGR6Q9HBX8 967 aa8.01□□□□□ -1.13
PTPRR-204ENST00000440835 RBM19Q9Y4C8 960 aaKnown RBP8.01□□□□□ -1.13
PTPRR-204ENST00000440835 DPY19L2Q6NUT2 758 aa8.01□□□□□ -1.13
PTPRR-204ENST00000440835 ZNF790Q6PG37 636 aa8.01□□□□□ -1.13
PTPRR-204ENST00000440835 CNKSR1Q969H4 720 aa8.01□□□□□ -1.13
PTPRR-204ENST00000440835 BCL2L12Q9HB09 334 aa8.01□□□□□ -1.13
PTPRR-204ENST00000440835 NUDCQ9Y266 331 aa8.01□□□□□ -1.13
PTPRR-204ENST00000440835 ZBTB1Q9Y2K1 713 aa8.01□□□□□ -1.13
PTPRR-204ENST00000440835 SCN4AP35499 1836 aa8□□□□□ -1.13
PTPRR-204ENST00000440835 GRIPAP1Q4V328 841 aa8□□□□□ -1.13
PTPRR-204ENST00000440835 ZNF652Q9Y2D9 606 aa8□□□□□ -1.13
PTPRR-204ENST00000440835 LAMB4A4D0S4 1761 aa8□□□□□ -1.13
PTPRR-204ENST00000440835 CHRNA5P30532 468 aa8□□□□□ -1.13
PTPRR-204ENST00000440835 ST5P78524 1137 aa7.99□□□□□ -1.13
PTPRR-204ENST00000440835 COL11A2P13942 1736 aaPredicted RBP7.99□□□□□ -1.13
PTPRR-204ENST00000440835 RRAGCQ9HB90 399 aa7.99□□□□□ -1.13
PTPRR-204ENST00000440835 HMOX1P09601 288 aa7.98□□□□□ -1.13
PTPRR-204ENST00000440835 SETDB2Q96T68 719 aa7.98□□□□□ -1.13
PTPRR-204ENST00000440835 RIC1Q4ADV7 1423 aa7.98□□□□□ -1.13
PTPRR-204ENST00000440835 SLC39A6Q13433 755 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms