RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 CENPQQ7L2Z9 268 aaPredicted RBP24.18■■□□□ 1.46
SNX17-203ENST00000440760 C1orf115Q9H7X2 142 aa24.18■■□□□ 1.46
SNX17-203ENST00000440760 ZBTB7BO15156 539 aaPredicted RBP24.17■■□□□ 1.46
SNX17-203ENST00000440760 PIGBQ92521 554 aa24.17■■□□□ 1.46
SNX17-203ENST00000440760 DBF4Q9UBU7 674 aaPredicted RBP24.16■■□□□ 1.46
SNX17-203ENST00000440760 AFF2P51816 1311 aa24.16■■□□□ 1.46
SNX17-203ENST00000440760 PTCD1O75127 700 aaKnown RBP24.16■■□□□ 1.46
SNX17-203ENST00000440760 SNRPA1P09661 255 aaKnown RBP24.16■■□□□ 1.46
SNX17-203ENST00000440760 MARCH10Q8NA82 808 aaPredicted RBP24.16■■□□□ 1.46
SNX17-203ENST00000440760 USP16Q9Y5T5 823 aa24.16■■□□□ 1.46
SNX17-203ENST00000440760 PIP4K2AP48426 406 aaPredicted RBP24.14■■□□□ 1.46
SNX17-203ENST00000440760 SYTL4Q96C24 671 aaPredicted RBP24.14■■□□□ 1.46
SNX17-203ENST00000440760 BCL9O00512 1426 aa24.14■■□□□ 1.45
SNX17-203ENST00000440760 CHMP4AQ9BY43 222 aa24.14■■□□□ 1.45
SNX17-203ENST00000440760 ASAP1Q9ULH1 1129 aa24.14■■□□□ 1.45
SNX17-203ENST00000440760 PDIA6Q15084 440 aa24.13■■□□□ 1.45
SNX17-203ENST00000440760 A0A0G2JS52 829 aa24.12■■□□□ 1.45
SNX17-203ENST00000440760 MYT1Q01538 1121 aa24.12■■□□□ 1.45
SNX17-203ENST00000440760 THSD7AQ9UPZ6 1657 aa24.12■■□□□ 1.45
SNX17-203ENST00000440760 PXDNLA1KZ92 1463 aa24.12■■□□□ 1.45
SNX17-203ENST00000440760 MYL6BP14649 208 aa24.11■■□□□ 1.45
SNX17-203ENST00000440760 ACSBG1Q96GR2 724 aa24.11■■□□□ 1.45
SNX17-203ENST00000440760 DDX21Q9NR30 783 aaKnown RBP eCLIP24.11■■□□□ 1.45
SNX17-203ENST00000440760 ADCY9O60503 1353 aa24.11■■□□□ 1.45
SNX17-203ENST00000440760 PRIM1P49642 420 aaKnown RBP24.11■■□□□ 1.45
SNX17-203ENST00000440760 MEIS3Q99687 375 aa24.11■■□□□ 1.45
SNX17-203ENST00000440760 ATG3Q9NT62 314 aa24.1■■□□□ 1.45
SNX17-203ENST00000440760 CCT4P50991 539 aaKnown RBP24.09■■□□□ 1.45
SNX17-203ENST00000440760 PI4KAP2A4QPH2 592 aa24.09■■□□□ 1.45
SNX17-203ENST00000440760 PI4KAP1Q8N8J0 262 aa24.09■■□□□ 1.45
SNX17-203ENST00000440760 HYPKQ9NX55 129 aa24.09■■□□□ 1.45
SNX17-203ENST00000440760 AIMP1Q12904 312 aaKnown RBP24.08■■□□□ 1.45
SNX17-203ENST00000440760 ATRNO75882 1429 aa24.07■■□□□ 1.44
SNX17-203ENST00000440760 CHMP4BQ9H444 224 aaKnown RBP24.07■■□□□ 1.44
SNX17-203ENST00000440760 RWDD1Q9H446 243 aaPredicted RBP24.06■■□□□ 1.44
SNX17-203ENST00000440760 DNAAF4Q8WXU2 420 aa24.05■■□□□ 1.44
SNX17-203ENST00000440760 RBM42Q9BTD8 480 aaKnown RBP24.05■■□□□ 1.44
SNX17-203ENST00000440760 LRP10Q7Z4F1 713 aa24.05■■□□□ 1.44
SNX17-203ENST00000440760 GJD4Q96KN9 370 aaPredicted RBP24.05■■□□□ 1.44
SNX17-203ENST00000440760 ATP10DQ9P241 1426 aa24.05■■□□□ 1.44
SNX17-203ENST00000440760 XAGE3Q8WTP9 111 aa24.04■■□□□ 1.44
SNX17-203ENST00000440760 MAP3K2Q9Y2U5 619 aa24.04■■□□□ 1.44
SNX17-203ENST00000440760 HDAC1Q13547 482 aaPredicted RBP24.03■■□□□ 1.44
SNX17-203ENST00000440760 TJP1Q07157 1748 aa24.03■■□□□ 1.44
SNX17-203ENST00000440760 NBPF26B4DH59 902 aa24.02■■□□□ 1.44
SNX17-203ENST00000440760 A1BGP04217 495 aa24.02■■□□□ 1.44
SNX17-203ENST00000440760 NBPF14Q5TI25 921 aa24.02■■□□□ 1.44
SNX17-203ENST00000440760 NBPF10Q6P3W6 841 aaKnown RBP24.02■■□□□ 1.44
SNX17-203ENST00000440760 SIRT2Q8IXJ6 389 aa24.02■■□□□ 1.44
SNX17-203ENST00000440760 NBPF15Q8N660 670 aa24.02■■□□□ 1.44
SNX17-203ENST00000440760 KSR2Q6VAB6 950 aa24.02■■□□□ 1.43
SNX17-203ENST00000440760 COPS6Q7L5N1 327 aa24.02■■□□□ 1.43
SNX17-203ENST00000440760 DNAJC10Q8IXB1 793 aa24.02■■□□□ 1.43
SNX17-203ENST00000440760 SLC4A9Q96Q91 983 aa24.02■■□□□ 1.43
SNX17-203ENST00000440760 TRPC5Q9UL62 973 aaPredicted RBP24.02■■□□□ 1.43
SNX17-203ENST00000440760 ARFGEF2Q9Y6D5 1785 aa24.01■■□□□ 1.43
SNX17-203ENST00000440760 KCNQ2O43526 872 aa24.01■■□□□ 1.43
SNX17-203ENST00000440760 BEND3Q5T5X7 828 aa24.01■■□□□ 1.43
SNX17-203ENST00000440760 SRCIN1Q9C0H9 1055 aa24.01■■□□□ 1.43
SNX17-203ENST00000440760 FAM182BQ5T319 152 aa24■■□□□ 1.43
SNX17-203ENST00000440760 DDX58O95786 925 aaKnown RBP23.98■■□□□ 1.43
SNX17-203ENST00000440760 ERBB4Q15303 1308 aa23.98■■□□□ 1.43
SNX17-203ENST00000440760 RGS3P49796 1198 aa23.98■■□□□ 1.43
SNX17-203ENST00000440760 CEP85Q6P2H3 762 aa23.97■■□□□ 1.43
SNX17-203ENST00000440760 RIC3Q7Z5B4 369 aa23.97■■□□□ 1.43
SNX17-203ENST00000440760 VSIG10Q8N0Z9 540 aa23.97■■□□□ 1.43
SNX17-203ENST00000440760 USP44Q9H0E7 712 aa23.97■■□□□ 1.43
SNX17-203ENST00000440760 TSHZ2Q9NRE2 1034 aa23.97■■□□□ 1.43
SNX17-203ENST00000440760 CWF19L2Q2TBE0 894 aaKnown RBP23.96■■□□□ 1.43
SNX17-203ENST00000440760 QTRT2Q9H974 415 aaKnown RBP23.96■■□□□ 1.43
SNX17-203ENST00000440760 PDZRN3Q9UPQ7 1066 aa23.96■■□□□ 1.43
SNX17-203ENST00000440760 NUP188Q5SRE5 1749 aa23.96■■□□□ 1.43
SNX17-203ENST00000440760 AFDNP55196 1824 aaKnown RBP23.94■■□□□ 1.42
SNX17-203ENST00000440760 PTF1AQ7RTS3 328 aa23.94■■□□□ 1.42
SNX17-203ENST00000440760 ANKRD44Q8N8A2 993 aa23.94■■□□□ 1.42
SNX17-203ENST00000440760 GNAI2P04899 355 aa23.94■■□□□ 1.42
SNX17-203ENST00000440760 GNAI3P08754 354 aa23.94■■□□□ 1.42
SNX17-203ENST00000440760 TTLL7Q6ZT98 887 aa23.94■■□□□ 1.42
SNX17-203ENST00000440760 SMC5Q8IY18 1101 aa23.94■■□□□ 1.42
SNX17-203ENST00000440760 ZNF330Q9Y3S2 320 aaPredicted RBP23.94■■□□□ 1.42
SNX17-203ENST00000440760 LRRFIP2Q9Y608 721 aaKnown RBP23.94■■□□□ 1.42
SNX17-203ENST00000440760 NHSQ6T4R5 1651 aa23.94■■□□□ 1.42
SNX17-203ENST00000440760 PALLDQ8WX93 1383 aa23.93■■□□□ 1.42
SNX17-203ENST00000440760 UBTFL1P0CB47 393 aaPredicted RBP23.93■■□□□ 1.42
SNX17-203ENST00000440760 ANKRD13DQ6ZTN6 518 aa23.93■■□□□ 1.42
SNX17-203ENST00000440760 SEPT12Q8IYM1 358 aa23.93■■□□□ 1.42
SNX17-203ENST00000440760 BTAF1O14981 1849 aa23.93■■□□□ 1.42
SNX17-203ENST00000440760 NBPF7P0C2Y1 421 aaPredicted RBP23.92■■□□□ 1.42
SNX17-203ENST00000440760 MYD88Q99836 296 aa23.92■■□□□ 1.42
SNX17-203ENST00000440760 TEX13AQ9BXU3 409 aaPredicted RBP23.92■■□□□ 1.42
SNX17-203ENST00000440760 IGKV5-2P06315 115 aa23.91■■□□□ 1.42
SNX17-203ENST00000440760 BRWD3Q6RI45 1802 aa23.91■■□□□ 1.42
SNX17-203ENST00000440760 STARD3NLO95772 234 aa23.91■■□□□ 1.42
SNX17-203ENST00000440760 CYP19A1P11511 503 aaPredicted RBP23.91■■□□□ 1.42
SNX17-203ENST00000440760 LINS1Q8NG48 757 aa23.91■■□□□ 1.42
SNX17-203ENST00000440760 SBF2Q86WG5 1849 aa23.9■■□□□ 1.42
SNX17-203ENST00000440760 ONECUT3O60422 494 aaPredicted RBP23.9■■□□□ 1.42
SNX17-203ENST00000440760 RPAP2Q8IXW5 612 aaPredicted RBP23.9■■□□□ 1.42
SNX17-203ENST00000440760 METTL22Q9BUU2 404 aaPredicted RBP23.9■■□□□ 1.42
SNX17-203ENST00000440760 ALDH1L1O75891 902 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms