RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 DBF4Q9UBU7 674 aaPredicted RBP35.56■■■■□ 3.28
CGREF1-207ENST00000440612 ANXA1P04083 346 aa35.54■■■■□ 3.28
CGREF1-207ENST00000440612 CCDC136Q96JN2 1154 aa35.54■■■■□ 3.28
CGREF1-207ENST00000440612 PTCD1O75127 700 aaKnown RBP35.53■■■■□ 3.28
CGREF1-207ENST00000440612 ITPRIPQ8IWB1 547 aa35.53■■■■□ 3.28
CGREF1-207ENST00000440612 ACSBG1Q96GR2 724 aa35.52■■■■□ 3.28
CGREF1-207ENST00000440612 LAMB4A4D0S4 1761 aa35.52■■■■□ 3.28
CGREF1-207ENST00000440612 SYTL4Q96C24 671 aaPredicted RBP35.52■■■■□ 3.28
CGREF1-207ENST00000440612 A0A0G2JS52 829 aa35.51■■■■□ 3.28
CGREF1-207ENST00000440612 MYT1Q01538 1121 aa35.51■■■■□ 3.28
CGREF1-207ENST00000440612 INTS3Q68E01 1043 aaKnown RBP35.51■■■■□ 3.28
CGREF1-207ENST00000440612 DDX19BQ9UMR2 479 aa35.51■■■■□ 3.28
CGREF1-207ENST00000440612 DDX21Q9NR30 783 aaKnown RBP eCLIP35.5■■■■□ 3.27
CGREF1-207ENST00000440612 AAMPQ13685 434 aa35.49■■■■□ 3.27
CGREF1-207ENST00000440612 LRP10Q7Z4F1 713 aa35.49■■■■□ 3.27
CGREF1-207ENST00000440612 F6X3S4 739 aa35.49■■■■□ 3.27
CGREF1-207ENST00000440612 SEPT12Q8IYM1 358 aa35.49■■■■□ 3.27
CGREF1-207ENST00000440612 FKBP5Q13451 457 aaPredicted RBP35.47■■■■□ 3.27
CGREF1-207ENST00000440612 SLC4A9Q96Q91 983 aa35.47■■■■□ 3.27
CGREF1-207ENST00000440612 ZBTB7BO15156 539 aaPredicted RBP35.46■■■■□ 3.27
CGREF1-207ENST00000440612 KCNQ2O43526 872 aa35.46■■■■□ 3.27
CGREF1-207ENST00000440612 VSIG10Q8N0Z9 540 aa35.46■■■■□ 3.27
CGREF1-207ENST00000440612 ZBTB40Q9NUA8 1239 aa35.46■■■■□ 3.27
CGREF1-207ENST00000440612 HYPKQ9NX55 129 aa35.46■■■■□ 3.27
CGREF1-207ENST00000440612 ZNF772Q68DY9 489 aaPredicted RBP35.43■■■■□ 3.26
CGREF1-207ENST00000440612 PCDHB15Q9Y5E8 787 aa35.43■■■■□ 3.26
CGREF1-207ENST00000440612 KAT6BQ8WYB5 2073 aa35.42■■■■□ 3.26
CGREF1-207ENST00000440612 ADCY9O60503 1353 aa35.41■■■■□ 3.26
CGREF1-207ENST00000440612 NBPF26B4DH59 902 aa35.41■■■■□ 3.26
CGREF1-207ENST00000440612 FAM182BQ5T319 152 aa35.41■■■■□ 3.26
CGREF1-207ENST00000440612 NBPF14Q5TI25 921 aa35.41■■■■□ 3.26
CGREF1-207ENST00000440612 NBPF10Q6P3W6 841 aaKnown RBP35.41■■■■□ 3.26
CGREF1-207ENST00000440612 NBPF15Q8N660 670 aa35.41■■■■□ 3.26
CGREF1-207ENST00000440612 ERBB4Q15303 1308 aa35.41■■■■□ 3.26
CGREF1-207ENST00000440612 PXDNLA1KZ92 1463 aa35.4■■■■□ 3.26
CGREF1-207ENST00000440612 PIP4K2AP48426 406 aaPredicted RBP35.39■■■■□ 3.26
CGREF1-207ENST00000440612 PTF1AQ7RTS3 328 aa35.39■■■■□ 3.26
CGREF1-207ENST00000440612 DNAJC10Q8IXB1 793 aa35.39■■■■□ 3.26
CGREF1-207ENST00000440612 RBM42Q9BTD8 480 aaKnown RBP35.39■■■■□ 3.26
CGREF1-207ENST00000440612 KDM2BQ8NHM5 1336 aa35.39■■■■□ 3.26
CGREF1-207ENST00000440612 PI4KAP2A4QPH2 592 aa35.37■■■■□ 3.25
CGREF1-207ENST00000440612 MYL6BP14649 208 aa35.37■■■■□ 3.25
CGREF1-207ENST00000440612 PI4KAP1Q8N8J0 262 aa35.37■■■■□ 3.25
CGREF1-207ENST00000440612 N4BP2Q86UW6 1770 aaPredicted RBP35.37■■■■□ 3.25
CGREF1-207ENST00000440612 CCT4P50991 539 aaKnown RBP35.37■■■■□ 3.25
CGREF1-207ENST00000440612 SLC4A10Q6U841 1118 aa35.37■■■■□ 3.25
CGREF1-207ENST00000440612 A1BGP04217 495 aa35.36■■■■□ 3.25
CGREF1-207ENST00000440612 TEX13AQ9BXU3 409 aaPredicted RBP35.36■■■■□ 3.25
CGREF1-207ENST00000440612 NHSQ6T4R5 1651 aa35.35■■■■□ 3.25
CGREF1-207ENST00000440612 RBM6P78332 1123 aaKnown RBP35.35■■■■□ 3.25
CGREF1-207ENST00000440612 TJP1Q07157 1748 aa35.35■■■■□ 3.25
CGREF1-207ENST00000440612 RGS17Q9UGC6 210 aaPredicted RBP35.34■■■■□ 3.25
CGREF1-207ENST00000440612 XAGE3Q8WTP9 111 aa35.33■■■■□ 3.25
CGREF1-207ENST00000440612 IGHDP01880 384 aa35.33■■■■□ 3.25
CGREF1-207ENST00000440612 KSR2Q6VAB6 950 aa35.33■■■■□ 3.25
CGREF1-207ENST00000440612 COPS6Q7L5N1 327 aa35.33■■■■□ 3.25
CGREF1-207ENST00000440612 DNAAF4Q8WXU2 420 aa35.33■■■■□ 3.25
CGREF1-207ENST00000440612 PALLDQ8WX93 1383 aa35.32■■■■□ 3.24
CGREF1-207ENST00000440612 CICQ96RK0 1608 aaPredicted RBP35.31■■■■□ 3.24
CGREF1-207ENST00000440612 BRWD3Q6RI45 1802 aa35.31■■■■□ 3.24
CGREF1-207ENST00000440612 CYP19A1P11511 503 aaPredicted RBP35.3■■■■□ 3.24
CGREF1-207ENST00000440612 BEND3Q5T5X7 828 aa35.3■■■■□ 3.24
CGREF1-207ENST00000440612 CHMP4BQ9H444 224 aaKnown RBP35.3■■■■□ 3.24
CGREF1-207ENST00000440612 ATP10DQ9P241 1426 aa35.3■■■■□ 3.24
CGREF1-207ENST00000440612 AIMP1Q12904 312 aaKnown RBP35.3■■■■□ 3.24
CGREF1-207ENST00000440612 MAP3K2Q9Y2U5 619 aa35.3■■■■□ 3.24
CGREF1-207ENST00000440612 SMARCC1Q92922 1105 aaPredicted RBP35.29■■■■□ 3.24
CGREF1-207ENST00000440612 MEIS3Q99687 375 aa35.29■■■■□ 3.24
CGREF1-207ENST00000440612 SBF2Q86WG5 1849 aa35.28■■■■□ 3.24
CGREF1-207ENST00000440612 LOC102724428A0A0B4J2F2 783 aa35.28■■■■□ 3.24
CGREF1-207ENST00000440612 SIK1P57059 783 aa35.28■■■■□ 3.24
CGREF1-207ENST00000440612 STARD3NLO95772 234 aa35.27■■■■□ 3.24
CGREF1-207ENST00000440612 DDX58O95786 925 aaKnown RBP35.26■■■■□ 3.23
CGREF1-207ENST00000440612 KRT27Q7Z3Y8 459 aa35.26■■■■□ 3.23
CGREF1-207ENST00000440612 BTAF1O14981 1849 aa35.26■■■■□ 3.23
CGREF1-207ENST00000440612 C1orf115Q9H7X2 142 aa35.25■■■■□ 3.23
CGREF1-207ENST00000440612 ITPK1Q13572 414 aa35.24■■■■□ 3.23
CGREF1-207ENST00000440612 CENPQQ7L2Z9 268 aaPredicted RBP35.24■■■■□ 3.23
CGREF1-207ENST00000440612 SRCIN1Q9C0H9 1055 aa35.24■■■■□ 3.23
CGREF1-207ENST00000440612 ZNF831Q5JPB2 1677 aa35.23■■■■□ 3.23
CGREF1-207ENST00000440612 ANKRD13DQ6ZTN6 518 aa35.23■■■■□ 3.23
CGREF1-207ENST00000440612 USP44Q9H0E7 712 aa35.22■■■■□ 3.23
CGREF1-207ENST00000440612 ATP6V1AP38606 617 aa35.21■■■■□ 3.23
CGREF1-207ENST00000440612 TTLL7Q6ZT98 887 aa35.21■■■■□ 3.23
CGREF1-207ENST00000440612 HDAC1Q13547 482 aaPredicted RBP35.21■■■■□ 3.23
CGREF1-207ENST00000440612 RIC3Q7Z5B4 369 aa35.2■■■■□ 3.23
CGREF1-207ENST00000440612 SIRT2Q8IXJ6 389 aa35.2■■■■□ 3.23
CGREF1-207ENST00000440612 RXRBP28702 533 aa35.19■■■■□ 3.22
CGREF1-207ENST00000440612 POTEAQ6S8J7 498 aa35.19■■■■□ 3.22
CGREF1-207ENST00000440612 ZBTB1Q9Y2K1 713 aa35.19■■■■□ 3.22
CGREF1-207ENST00000440612 PLBD2Q8NHP8 589 aa35.18■■■■□ 3.22
CGREF1-207ENST00000440612 METTL22Q9BUU2 404 aaPredicted RBP35.18■■■■□ 3.22
CGREF1-207ENST00000440612 RREB1Q92766 1687 aa35.18■■■■□ 3.22
CGREF1-207ENST00000440612 IGKV5-2P06315 115 aa35.17■■■■□ 3.22
CGREF1-207ENST00000440612 INTS5Q6P9B9 1019 aaKnown RBP35.17■■■■□ 3.22
CGREF1-207ENST00000440612 FAM196AQ6ZSG2 479 aa35.17■■■■□ 3.22
CGREF1-207ENST00000440612 LINS1Q8NG48 757 aa35.17■■■■□ 3.22
CGREF1-207ENST00000440612 ALDH1L1O75891 902 aa35.17■■■■□ 3.22
CGREF1-207ENST00000440612 BCL11BQ9C0K0 894 aaPredicted RBP35.17■■■■□ 3.22
CGREF1-207ENST00000440612 IBTKQ9P2D0 1353 aaPredicted RBP35.16■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms