RNA–Protein interactions for RNA: ENST00000440556.1

LINC02048-201, Transcript of long intergenic non-protein coding RNA 2048, humanhuman

TSL 5 BASIC

Gene LINC02048, Length 1,771 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02048-201ENST00000440556 ADGRB1O14514 1584 aa16.29■□□□□ 0.2
LINC02048-201ENST00000440556 H2AFXP16104 143 aaPredicted RBP16.28■□□□□ 0.2
LINC02048-201ENST00000440556 RAD51AP2Q09MP3 1159 aa16.28■□□□□ 0.2
LINC02048-201ENST00000440556 LMOD3Q0VAK6 560 aa16.28■□□□□ 0.2
LINC02048-201ENST00000440556 NFE2L2Q16236 605 aa16.28■□□□□ 0.2
LINC02048-201ENST00000440556 TWISTNBQ3B726 338 aaPredicted RBP16.28■□□□□ 0.2
LINC02048-201ENST00000440556 ZNF215Q9UL58 517 aaPredicted RBP16.28■□□□□ 0.2
LINC02048-201ENST00000440556 LRRC7Q96NW7 1537 aa16.28■□□□□ 0.2
LINC02048-201ENST00000440556 RAD50Q92878 1312 aa16.28■□□□□ 0.2
LINC02048-201ENST00000440556 MROH2AA6NES4 1674 aa16.28■□□□□ 0.2
LINC02048-201ENST00000440556 TYRO3Q06418 890 aa16.28■□□□□ 0.2
LINC02048-201ENST00000440556 OTUD7AQ8TE49 926 aaPredicted RBP16.28■□□□□ 0.2
LINC02048-201ENST00000440556 TRIM5Q9C035 493 aa16.28■□□□□ 0.2
LINC02048-201ENST00000440556 NUP62CLQ9H1M0 184 aa16.28■□□□□ 0.2
LINC02048-201ENST00000440556 C14orf93Q9H972 538 aaKnown RBP16.28■□□□□ 0.2
LINC02048-201ENST00000440556 DHX8Q14562 1220 aaKnown RBP16.27■□□□□ 0.2
LINC02048-201ENST00000440556 NAA30Q147X3 362 aaPredicted RBP16.27■□□□□ 0.2
LINC02048-201ENST00000440556 ARGLU1Q9NWB6 273 aaPredicted RBP16.27■□□□□ 0.2
LINC02048-201ENST00000440556 MRVI1Q9Y6F6 885 aa16.27■□□□□ 0.2
LINC02048-201ENST00000440556 CPSF1Q10570 1443 aaKnown RBP16.27■□□□□ 0.19
LINC02048-201ENST00000440556 SYT1P21579 422 aa16.26■□□□□ 0.19
LINC02048-201ENST00000440556 FOXD4L6Q3SYB3 417 aaPredicted RBP16.26■□□□□ 0.19
LINC02048-201ENST00000440556 FOXD4L3Q6VB84 417 aaPredicted RBP16.26■□□□□ 0.19
LINC02048-201ENST00000440556 SMC3Q9UQE7 1217 aa16.26■□□□□ 0.19
LINC02048-201ENST00000440556 SIGLEC1Q9BZZ2 1709 aa16.26■□□□□ 0.19
LINC02048-201ENST00000440556 FIBPO43427 364 aa16.26■□□□□ 0.19
LINC02048-201ENST00000440556 LRMPQ12912 555 aa16.26■□□□□ 0.19
LINC02048-201ENST00000440556 SARM1Q6SZW1 724 aa16.26■□□□□ 0.19
LINC02048-201ENST00000440556 AEBP2Q6ZN18 517 aaPredicted RBP16.26■□□□□ 0.19
LINC02048-201ENST00000440556 CLIP2Q9UDT6 1046 aa16.26■□□□□ 0.19
LINC02048-201ENST00000440556 TPM1P09493 284 aa16.25■□□□□ 0.19
LINC02048-201ENST00000440556 CHMLP26374 656 aa16.25■□□□□ 0.19
LINC02048-201ENST00000440556 FILIP1Q7Z7B0 1213 aa16.25■□□□□ 0.19
LINC02048-201ENST00000440556 LRRC8AQ8IWT6 810 aa16.25■□□□□ 0.19
LINC02048-201ENST00000440556 ZNF592Q92610 1267 aa16.25■□□□□ 0.19
LINC02048-201ENST00000440556 CBX8Q9HC52 389 aa16.25■□□□□ 0.19
LINC02048-201ENST00000440556 BRMS1Q9HCU9 246 aa16.25■□□□□ 0.19
LINC02048-201ENST00000440556 DDX19AQ9NUU7 478 aaKnown RBP16.25■□□□□ 0.19
LINC02048-201ENST00000440556 PALD1Q9ULE6 856 aa16.25■□□□□ 0.19
LINC02048-201ENST00000440556 LIMCH1Q9UPQ0 1083 aa16.25■□□□□ 0.19
LINC02048-201ENST00000440556 TULP4Q9NRJ4 1543 aa16.25■□□□□ 0.19
LINC02048-201ENST00000440556 AOX1Q06278 1338 aa16.24■□□□□ 0.19
LINC02048-201ENST00000440556 HSPA4P34932 840 aa16.24■□□□□ 0.19
LINC02048-201ENST00000440556 ELF2Q15723 593 aa16.24■□□□□ 0.19
LINC02048-201ENST00000440556 GGT6Q6P531 493 aa16.24■□□□□ 0.19
LINC02048-201ENST00000440556 RBM43Q6ZSC3 357 aaKnown RBP16.24■□□□□ 0.19
LINC02048-201ENST00000440556 GOLGA6L1Q8N7Z2 621 aa16.24■□□□□ 0.19
LINC02048-201ENST00000440556 CACTINQ8WUQ7 758 aaKnown RBP16.24■□□□□ 0.19
LINC02048-201ENST00000440556 RTF1Q92541 710 aaKnown RBP16.24■□□□□ 0.19
LINC02048-201ENST00000440556 MRFAP1L1Q96HT8 127 aa16.24■□□□□ 0.19
LINC02048-201ENST00000440556 ANO2Q9NQ90 1003 aa16.24■□□□□ 0.19
LINC02048-201ENST00000440556 TRAK1Q9UPV9 953 aa16.24■□□□□ 0.19
LINC02048-201ENST00000440556 PTPRCP08575 1304 aa16.24■□□□□ 0.19
LINC02048-201ENST00000440556 MMP14P50281 582 aa16.23■□□□□ 0.19
LINC02048-201ENST00000440556 ZSCAN31Q96LW9 406 aaPredicted RBP16.23■□□□□ 0.19
LINC02048-201ENST00000440556 L2HGDHQ9H9P8 463 aa16.23■□□□□ 0.19
LINC02048-201ENST00000440556 ZNF446Q9NWS9 450 aa16.23■□□□□ 0.19
LINC02048-201ENST00000440556 FHOD1Q9Y613 1164 aa16.23■□□□□ 0.19
LINC02048-201ENST00000440556 KIAA0232Q92628 1395 aa16.23■□□□□ 0.19
LINC02048-201ENST00000440556 ARHGEF28Q8N1W1 1705 aaKnown RBP16.23■□□□□ 0.19
LINC02048-201ENST00000440556 TSPYL6Q8N831 410 aa16.23■□□□□ 0.19
LINC02048-201ENST00000440556 MBIPQ9NS73 344 aa16.23■□□□□ 0.19
LINC02048-201ENST00000440556 PIK3C2BO00750 1634 aa16.23■□□□□ 0.19
LINC02048-201ENST00000440556 UGGT1Q9NYU2 1555 aa16.22■□□□□ 0.19
LINC02048-201ENST00000440556 NOP2P46087 812 aaKnown RBP16.22■□□□□ 0.19
LINC02048-201ENST00000440556 MLECQ14165 292 aa16.22■□□□□ 0.19
LINC02048-201ENST00000440556 NOM1Q5C9Z4 860 aaKnown RBP16.22■□□□□ 0.19
LINC02048-201ENST00000440556 ZFP91Q96JP5 570 aaPredicted RBP16.22■□□□□ 0.19
LINC02048-201ENST00000440556 TNMDQ9H2S6 317 aa16.22■□□□□ 0.19
LINC02048-201ENST00000440556 RSPH14Q9UHP6 348 aa16.22■□□□□ 0.19
LINC02048-201ENST00000440556 KIF20BQ96Q89 1820 aa16.22■□□□□ 0.19
LINC02048-201ENST00000440556 SALL3Q9BXA9 1300 aa16.22■□□□□ 0.19
LINC02048-201ENST00000440556 CFAP65Q6ZU64 1925 aaKnown RBP16.21■□□□□ 0.19
LINC02048-201ENST00000440556 PNMA6AP0CW24 399 aaPredicted RBP16.21■□□□□ 0.19
LINC02048-201ENST00000440556 CASQ1P31415 396 aa16.21■□□□□ 0.19
LINC02048-201ENST00000440556 KRT85P78386 507 aa16.21■□□□□ 0.19
LINC02048-201ENST00000440556 ANO6Q4KMQ2 910 aa16.21■□□□□ 0.19
LINC02048-201ENST00000440556 NOL8Q76FK4 1167 aaKnown RBP16.21■□□□□ 0.19
LINC02048-201ENST00000440556 LUZP1Q86V48 1076 aa16.21■□□□□ 0.19
LINC02048-201ENST00000440556 CHMP4AQ9BY43 222 aa16.21■□□□□ 0.19
LINC02048-201ENST00000440556 STAP2Q9UGK3 403 aa16.21■□□□□ 0.19
LINC02048-201ENST00000440556 NRBP1Q9UHY1 535 aa16.21■□□□□ 0.19
LINC02048-201ENST00000440556 CAMSAP1Q5T5Y3 1602 aa16.21■□□□□ 0.19
LINC02048-201ENST00000440556 TTC14Q96N46 770 aa16.21■□□□□ 0.18
LINC02048-201ENST00000440556 SH2B1Q9NRF2 756 aaPredicted RBP16.21■□□□□ 0.18
LINC02048-201ENST00000440556 TERF2IPQ9NYB0 399 aa16.21■□□□□ 0.18
LINC02048-201ENST00000440556 PSD3Q9NYI0 1048 aa16.21■□□□□ 0.18
LINC02048-201ENST00000440556 PRKAR2BP31323 418 aa16.2■□□□□ 0.18
LINC02048-201ENST00000440556 KCNJ6P48051 423 aa16.2■□□□□ 0.18
LINC02048-201ENST00000440556 GSDMDP57764 484 aa16.2■□□□□ 0.18
LINC02048-201ENST00000440556 AXDND1Q5T1B0 1012 aaPredicted RBP16.2■□□□□ 0.18
LINC02048-201ENST00000440556 TMCO3Q6UWJ1 677 aa16.2■□□□□ 0.18
LINC02048-201ENST00000440556 CCAR2Q8N163 923 aaKnown RBP16.2■□□□□ 0.18
LINC02048-201ENST00000440556 MTMR6Q9Y217 621 aa16.2■□□□□ 0.18
LINC02048-201ENST00000440556 A0A1W2PP64 1363 aa16.19■□□□□ 0.18
LINC02048-201ENST00000440556 AATKQ6ZMQ8 1374 aa16.19■□□□□ 0.18
LINC02048-201ENST00000440556 ZRANB2O95218 330 aaKnown RBP eCLIP16.19■□□□□ 0.18
LINC02048-201ENST00000440556 PLA2G4AP47712 749 aa16.19■□□□□ 0.18
LINC02048-201ENST00000440556 DNM1Q05193 864 aaKnown RBP16.19■□□□□ 0.18
LINC02048-201ENST00000440556 AK7Q96M32 723 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms