RNA–Protein interactions for RNA: ENST00000439088.1

LINC00163-202, long intergenic non-protein coding RNA 163, humanhuman

TSL 1 (best)

Gene LINC00163, Length 2,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00163-202ENST00000439088 COL16A1Q07092 1604 aaPredicted RBP18.73■□□□□ 0.59
LINC00163-202ENST00000439088 SHANK3Q9BYB0 1731 aa18.72■□□□□ 0.59
LINC00163-202ENST00000439088 UBTFL1P0CB47 393 aaPredicted RBP18.72■□□□□ 0.59
LINC00163-202ENST00000439088 ATP8B2P98198 1209 aa18.72■□□□□ 0.59
LINC00163-202ENST00000439088 DDX58O95786 925 aaKnown RBP18.71■□□□□ 0.59
LINC00163-202ENST00000439088 C5P01031 1676 aa18.71■□□□□ 0.59
LINC00163-202ENST00000439088 ZBTB47Q9UFB7 747 aaPredicted RBP18.71■□□□□ 0.59
LINC00163-202ENST00000439088 MAP3K2Q9Y2U5 619 aa18.71■□□□□ 0.59
LINC00163-202ENST00000439088 USP16Q9Y5T5 823 aa18.71■□□□□ 0.59
LINC00163-202ENST00000439088 ALDH1L1O75891 902 aa18.7■□□□□ 0.58
LINC00163-202ENST00000439088 LRRFIP2Q9Y608 721 aaKnown RBP18.7■□□□□ 0.58
LINC00163-202ENST00000439088 DISP2A7MBM2 1401 aa18.69■□□□□ 0.58
LINC00163-202ENST00000439088 PIP4K2BP78356 416 aa18.69■□□□□ 0.58
LINC00163-202ENST00000439088 SEC24BO95487 1268 aa18.68■□□□□ 0.58
LINC00163-202ENST00000439088 BMP2KLQ5H9B9 411 aa18.68■□□□□ 0.58
LINC00163-202ENST00000439088 AIMP1Q12904 312 aaKnown RBP18.67■□□□□ 0.58
LINC00163-202ENST00000439088 PNMA6EA0A0J9YXQ4 647 aa18.66■□□□□ 0.58
LINC00163-202ENST00000439088 ADAMTS2O95450 1211 aa18.66■□□□□ 0.58
LINC00163-202ENST00000439088 NBPF7P0C2Y1 421 aaPredicted RBP18.66■□□□□ 0.58
LINC00163-202ENST00000439088 MYL6BP14649 208 aa18.66■□□□□ 0.58
LINC00163-202ENST00000439088 LRP10Q7Z4F1 713 aa18.66■□□□□ 0.58
LINC00163-202ENST00000439088 LINS1Q8NG48 757 aa18.66■□□□□ 0.58
LINC00163-202ENST00000439088 ERBB4Q15303 1308 aa18.65■□□□□ 0.58
LINC00163-202ENST00000439088 COPS6Q7L5N1 327 aa18.65■□□□□ 0.58
LINC00163-202ENST00000439088 PLEKHM2Q8IWE5 1019 aa18.65■□□□□ 0.58
LINC00163-202ENST00000439088 HDAC5Q9UQL6 1122 aa18.65■□□□□ 0.58
LINC00163-202ENST00000439088 RIC3Q7Z5B4 369 aa18.65■□□□□ 0.58
LINC00163-202ENST00000439088 SSH3Q8TE77 659 aa18.65■□□□□ 0.58
LINC00163-202ENST00000439088 XAGE3Q8WTP9 111 aa18.65■□□□□ 0.58
LINC00163-202ENST00000439088 DDRGK1Q96HY6 314 aa18.65■□□□□ 0.58
LINC00163-202ENST00000439088 TMOD3Q9NYL9 352 aa18.65■□□□□ 0.58
LINC00163-202ENST00000439088 UBR2Q8IWV8 1755 aa18.64■□□□□ 0.58
LINC00163-202ENST00000439088 IBTKQ9P2D0 1353 aaPredicted RBP18.64■□□□□ 0.58
LINC00163-202ENST00000439088 PLCH1Q4KWH8 1693 aa18.64■□□□□ 0.58
LINC00163-202ENST00000439088 PAPPAQ13219 1627 aa18.64■□□□□ 0.57
LINC00163-202ENST00000439088 EXOC5O00471 708 aa18.64■□□□□ 0.57
LINC00163-202ENST00000439088 CDCA7Q9BWT1 371 aaPredicted RBP18.64■□□□□ 0.57
LINC00163-202ENST00000439088 GLI3P10071 1580 aa18.64■□□□□ 0.57
LINC00163-202ENST00000439088 UBAP1LF5GYI3 381 aa18.64■□□□□ 0.57
LINC00163-202ENST00000439088 TNS2Q63HR2 1409 aa18.63■□□□□ 0.57
LINC00163-202ENST00000439088 LAMB4A4D0S4 1761 aa18.63■□□□□ 0.57
LINC00163-202ENST00000439088 KCPQ6ZWJ8 1503 aa18.63■□□□□ 0.57
LINC00163-202ENST00000439088 ANKRD13DQ6ZTN6 518 aa18.63■□□□□ 0.57
LINC00163-202ENST00000439088 C16orf71Q8IYS4 520 aaPredicted RBP18.63■□□□□ 0.57
LINC00163-202ENST00000439088 UPF2Q9HAU5 1272 aaKnown RBP18.63■□□□□ 0.57
LINC00163-202ENST00000439088 C9orf78Q9NZ63 289 aaPredicted RBP18.63■□□□□ 0.57
LINC00163-202ENST00000439088 THRAP3Q9Y2W1 955 aaKnown RBP18.63■□□□□ 0.57
LINC00163-202ENST00000439088 POLA2Q14181 598 aa18.62■□□□□ 0.57
LINC00163-202ENST00000439088 NUTM2BA6NNL0 878 aaPredicted RBP18.62■□□□□ 0.57
LINC00163-202ENST00000439088 NUTM2EB1AL46 878 aaPredicted RBP18.62■□□□□ 0.57
LINC00163-202ENST00000439088 SMARCA5O60264 1052 aaPredicted RBP18.62■□□□□ 0.57
LINC00163-202ENST00000439088 NEXNQ0ZGT2 675 aa18.62■□□□□ 0.57
LINC00163-202ENST00000439088 PPP1R42Q7Z4L9 355 aa18.62■□□□□ 0.57
LINC00163-202ENST00000439088 NUTM2AQ8IVF1 878 aaPredicted RBP18.62■□□□□ 0.57
LINC00163-202ENST00000439088 METTL22Q9BUU2 404 aaPredicted RBP18.62■□□□□ 0.57
LINC00163-202ENST00000439088 NOP58Q9Y2X3 529 aaKnown RBP18.62■□□□□ 0.57
LINC00163-202ENST00000439088 TOGARAM1Q9Y4F4 1720 aa18.62■□□□□ 0.57
LINC00163-202ENST00000439088 UTYO14607 1347 aa18.61■□□□□ 0.57
LINC00163-202ENST00000439088 SPATA31A1Q5TZJ5 1347 aa18.61■□□□□ 0.57
LINC00163-202ENST00000439088 APBB1O00213 710 aa18.61■□□□□ 0.57
LINC00163-202ENST00000439088 CWF19L2Q2TBE0 894 aaKnown RBP18.61■□□□□ 0.57
LINC00163-202ENST00000439088 EXOC6BQ9Y2D4 811 aa18.61■□□□□ 0.57
LINC00163-202ENST00000439088 LRRCC1Q9C099 1032 aa18.61■□□□□ 0.57
LINC00163-202ENST00000439088 GRM8O00222 908 aa18.6■□□□□ 0.57
LINC00163-202ENST00000439088 PTCD1O75127 700 aaKnown RBP18.6■□□□□ 0.57
LINC00163-202ENST00000439088 PIGBQ92521 554 aa18.6■□□□□ 0.57
LINC00163-202ENST00000439088 NRAPQ86VF7 1730 aa18.6■□□□□ 0.57
LINC00163-202ENST00000439088 IGKV5-2P06315 115 aa18.59■□□□□ 0.57
LINC00163-202ENST00000439088 MTX1Q13505 466 aa18.59■□□□□ 0.57
LINC00163-202ENST00000439088 NBPF26B4DH59 902 aa18.59■□□□□ 0.57
LINC00163-202ENST00000439088 SRGAP3O43295 1099 aa18.59■□□□□ 0.57
LINC00163-202ENST00000439088 PIP4K2AP48426 406 aaPredicted RBP18.59■□□□□ 0.57
LINC00163-202ENST00000439088 NBPF14Q5TI25 921 aa18.59■□□□□ 0.57
LINC00163-202ENST00000439088 NBPF10Q6P3W6 841 aaKnown RBP18.59■□□□□ 0.57
LINC00163-202ENST00000439088 NBPF15Q8N660 670 aa18.59■□□□□ 0.57
LINC00163-202ENST00000439088 WNK3Q9BYP7 1800 aa18.58■□□□□ 0.57
LINC00163-202ENST00000439088 RAB11FIP3O75154 756 aa18.58■□□□□ 0.57
LINC00163-202ENST00000439088 TTC22Q5TAA0 569 aa18.58■□□□□ 0.57
LINC00163-202ENST00000439088 VSIG10Q8N0Z9 540 aa18.58■□□□□ 0.57
LINC00163-202ENST00000439088 PLBD2Q8NHP8 589 aa18.58■□□□□ 0.57
LINC00163-202ENST00000439088 TEX13AQ9BXU3 409 aaPredicted RBP18.58■□□□□ 0.57
LINC00163-202ENST00000439088 LRP6O75581 1613 aa18.58■□□□□ 0.56
LINC00163-202ENST00000439088 NEURL1BA8MQ27 555 aa18.58■□□□□ 0.56
LINC00163-202ENST00000439088 OTUD7AQ8TE49 926 aaPredicted RBP18.58■□□□□ 0.56
LINC00163-202ENST00000439088 OSBPL3Q9H4L5 887 aa18.58■□□□□ 0.56
LINC00163-202ENST00000439088 SLIT2O94813 1529 aa18.57■□□□□ 0.56
LINC00163-202ENST00000439088 ERICH6Q7L0X2 663 aa18.57■□□□□ 0.56
LINC00163-202ENST00000439088 TBC1D32Q96NH3 1257 aa18.57■□□□□ 0.56
LINC00163-202ENST00000439088 MYD88Q99836 296 aa18.57■□□□□ 0.56
LINC00163-202ENST00000439088 ATG3Q9NT62 314 aa18.57■□□□□ 0.56
LINC00163-202ENST00000439088 ASAP1Q9ULH1 1129 aa18.57■□□□□ 0.56
LINC00163-202ENST00000439088 SPATA31A5Q5VU36 1347 aa18.57■□□□□ 0.56
LINC00163-202ENST00000439088 SPATA31A7Q8IWB4 1347 aa18.57■□□□□ 0.56
LINC00163-202ENST00000439088 GSPT1P15170 499 aaKnown RBP18.56■□□□□ 0.56
LINC00163-202ENST00000439088 GCKRQ14397 625 aa18.56■□□□□ 0.56
LINC00163-202ENST00000439088 NWD2Q9ULI1 1742 aa18.56■□□□□ 0.56
LINC00163-202ENST00000439088 SURF6O75683 361 aaKnown RBP18.56■□□□□ 0.56
LINC00163-202ENST00000439088 A1BGP04217 495 aa18.56■□□□□ 0.56
LINC00163-202ENST00000439088 BCL11AQ9H165 835 aa18.56■□□□□ 0.56
LINC00163-202ENST00000439088 BCL9O00512 1426 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms