RNA–Protein interactions for RNA: ENST00000438661.2

KCNC4-204, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNC4, Length 2,953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-204ENST00000438661 RTL1A6NKG5 1358 aa21.62■■□□□ 1.05
KCNC4-204ENST00000438661 CCDC192P0DO97 292 aa21.62■■□□□ 1.05
KCNC4-204ENST00000438661 CPA1P15085 419 aa21.62■■□□□ 1.05
KCNC4-204ENST00000438661 HMMRO75330 724 aa21.61■■□□□ 1.05
KCNC4-204ENST00000438661 GABPB1Q06547 395 aaPredicted RBP21.61■■□□□ 1.05
KCNC4-204ENST00000438661 TRIM5Q9C035 493 aa21.61■■□□□ 1.05
KCNC4-204ENST00000438661 IL25Q9H293 177 aa21.61■■□□□ 1.05
KCNC4-204ENST00000438661 REREQ9P2R6 1566 aa21.61■■□□□ 1.05
KCNC4-204ENST00000438661 FUCA2Q9BTY2 467 aa21.61■■□□□ 1.05
KCNC4-204ENST00000438661 SMC3Q9UQE7 1217 aa21.61■■□□□ 1.05
KCNC4-204ENST00000438661 RPAP1Q9BWH6 1393 aaPredicted RBP21.61■■□□□ 1.05
KCNC4-204ENST00000438661 VPS37CA5D8V6 355 aaPredicted RBP21.6■■□□□ 1.05
KCNC4-204ENST00000438661 ST7Q9NRC1 585 aa21.6■■□□□ 1.05
KCNC4-204ENST00000438661 SMTNL1A8MU46 457 aa21.6■■□□□ 1.05
KCNC4-204ENST00000438661 TERF2Q15554 542 aa21.6■■□□□ 1.05
KCNC4-204ENST00000438661 KIF18AQ8NI77 898 aa21.6■■□□□ 1.05
KCNC4-204ENST00000438661 RTF1Q92541 710 aaKnown RBP21.6■■□□□ 1.05
KCNC4-204ENST00000438661 F13A1P00488 732 aa21.59■■□□□ 1.05
KCNC4-204ENST00000438661 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.59■■□□□ 1.05
KCNC4-204ENST00000438661 TMEM87AQ8NBN3 555 aa21.58■■□□□ 1.05
KCNC4-204ENST00000438661 COG3Q96JB2 828 aa21.58■■□□□ 1.05
KCNC4-204ENST00000438661 WASLO00401 505 aaPredicted RBP21.58■■□□□ 1.04
KCNC4-204ENST00000438661 SLC4A2P04920 1241 aa21.58■■□□□ 1.04
KCNC4-204ENST00000438661 ATP7BP35670 1465 aa21.58■■□□□ 1.04
KCNC4-204ENST00000438661 ANAPC15P60006 121 aa21.57■■□□□ 1.04
KCNC4-204ENST00000438661 LMOD3Q0VAK6 560 aa21.57■■□□□ 1.04
KCNC4-204ENST00000438661 TXNDC2Q86VQ3 553 aa21.57■■□□□ 1.04
KCNC4-204ENST00000438661 RGS12O14924 1447 aa21.57■■□□□ 1.04
KCNC4-204ENST00000438661 CCDC66A2RUB6 948 aa21.57■■□□□ 1.04
KCNC4-204ENST00000438661 AEBP1Q8IUX7 1158 aa21.57■■□□□ 1.04
KCNC4-204ENST00000438661 KRT222Q8N1A0 295 aa21.57■■□□□ 1.04
KCNC4-204ENST00000438661 DDX54Q8TDD1 881 aaKnown RBP21.57■■□□□ 1.04
KCNC4-204ENST00000438661 FAM173BQ6P4H8 233 aa21.57■■□□□ 1.04
KCNC4-204ENST00000438661 FERMT3Q86UX7 667 aa21.57■■□□□ 1.04
KCNC4-204ENST00000438661 RIMS2Q9UQ26 1411 aa21.57■■□□□ 1.04
KCNC4-204ENST00000438661 RICTORQ6R327 1708 aa21.56■■□□□ 1.04
KCNC4-204ENST00000438661 AK2P54819 239 aa21.56■■□□□ 1.04
KCNC4-204ENST00000438661 CCDC83Q8IWF9 413 aa21.56■■□□□ 1.04
KCNC4-204ENST00000438661 MIS18AQ9NYP9 233 aa21.56■■□□□ 1.04
KCNC4-204ENST00000438661 CHMP4AQ9BY43 222 aa21.56■■□□□ 1.04
KCNC4-204ENST00000438661 KMT5BQ4FZB7 885 aa21.55■■□□□ 1.04
KCNC4-204ENST00000438661 FAM200AQ8TCP9 573 aa21.55■■□□□ 1.04
KCNC4-204ENST00000438661 NUDT16Q96DE0 195 aaKnown RBP21.55■■□□□ 1.04
KCNC4-204ENST00000438661 TIGD1Q96MW7 591 aa21.55■■□□□ 1.04
KCNC4-204ENST00000438661 IL1RAPL2Q9NP60 686 aa21.55■■□□□ 1.04
KCNC4-204ENST00000438661 ATP6V1DQ9Y5K8 247 aa21.55■■□□□ 1.04
KCNC4-204ENST00000438661 MORC2Q9Y6X9 1032 aaPredicted RBP21.55■■□□□ 1.04
KCNC4-204ENST00000438661 LRRCC1Q9C099 1032 aa21.55■■□□□ 1.04
KCNC4-204ENST00000438661 ZSCAN25Q6NSZ9 544 aa21.54■■□□□ 1.04
KCNC4-204ENST00000438661 OSBPL3Q9H4L5 887 aa21.54■■□□□ 1.04
KCNC4-204ENST00000438661 ANO6Q4KMQ2 910 aa21.54■■□□□ 1.04
KCNC4-204ENST00000438661 CEP135Q66GS9 1140 aa21.54■■□□□ 1.04
KCNC4-204ENST00000438661 MCM10Q7L590 875 aa21.54■■□□□ 1.04
KCNC4-204ENST00000438661 IPO4Q8TEX9 1081 aaKnown RBP21.54■■□□□ 1.04
KCNC4-204ENST00000438661 ZNF215Q9UL58 517 aaPredicted RBP21.54■■□□□ 1.04
KCNC4-204ENST00000438661 CPSF1Q10570 1443 aaKnown RBP21.54■■□□□ 1.04
KCNC4-204ENST00000438661 EDC4Q6P2E9 1401 aaKnown RBP21.54■■□□□ 1.04
KCNC4-204ENST00000438661 DLG5Q8TDM6 1919 aa21.54■■□□□ 1.04
KCNC4-204ENST00000438661 TYRO3Q06418 890 aa21.54■■□□□ 1.04
KCNC4-204ENST00000438661 GJB2P29033 226 aa21.53■■□□□ 1.04
KCNC4-204ENST00000438661 SULT6B1Q6IMI4 303 aa21.53■■□□□ 1.04
KCNC4-204ENST00000438661 LARGE1O95461 756 aa21.53■■□□□ 1.04
KCNC4-204ENST00000438661 MAP3K11Q16584 847 aa21.53■■□□□ 1.04
KCNC4-204ENST00000438661 TRMT1Q9NXH9 659 aaKnown RBP21.53■■□□□ 1.04
KCNC4-204ENST00000438661 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.53■■□□□ 1.04
KCNC4-204ENST00000438661 LIG1P18858 919 aa21.52■■□□□ 1.04
KCNC4-204ENST00000438661 MLECQ14165 292 aa21.52■■□□□ 1.04
KCNC4-204ENST00000438661 RUFY3Q7L099 469 aa21.52■■□□□ 1.04
KCNC4-204ENST00000438661 CACTINQ8WUQ7 758 aaKnown RBP21.52■■□□□ 1.04
KCNC4-204ENST00000438661 MRVI1Q9Y6F6 885 aa21.52■■□□□ 1.04
KCNC4-204ENST00000438661 CDK12Q9NYV4 1490 aaPredicted RBP21.52■■□□□ 1.04
KCNC4-204ENST00000438661 NUTM1Q86Y26 1132 aa21.52■■□□□ 1.04
KCNC4-204ENST00000438661 NUP62CLQ9H1M0 184 aa21.52■■□□□ 1.04
KCNC4-204ENST00000438661 CBX8Q9HC52 389 aa21.52■■□□□ 1.04
KCNC4-204ENST00000438661 PAXBP1Q9Y5B6 917 aa21.52■■□□□ 1.04
KCNC4-204ENST00000438661 ELF2Q15723 593 aa21.51■■□□□ 1.03
KCNC4-204ENST00000438661 G2E3Q7L622 706 aa21.51■■□□□ 1.03
KCNC4-204ENST00000438661 RASEFQ8IZ41 740 aa21.51■■□□□ 1.03
KCNC4-204ENST00000438661 ARID5BQ14865 1188 aa21.51■■□□□ 1.03
KCNC4-204ENST00000438661 CLIP2Q9UDT6 1046 aa21.51■■□□□ 1.03
KCNC4-204ENST00000438661 LIMCH1Q9UPQ0 1083 aa21.51■■□□□ 1.03
KCNC4-204ENST00000438661 CPS1P31327 1500 aa21.51■■□□□ 1.03
KCNC4-204ENST00000438661 USP27XA6NNY8 438 aa21.51■■□□□ 1.03
KCNC4-204ENST00000438661 PNMA6EA0A0J9YXQ4 647 aa21.5■■□□□ 1.03
KCNC4-204ENST00000438661 GOLGA6L4A6NEF3 574 aa21.5■■□□□ 1.03
KCNC4-204ENST00000438661 AATKQ6ZMQ8 1374 aa21.5■■□□□ 1.03
KCNC4-204ENST00000438661 CASTP20810 708 aaKnown RBP21.5■■□□□ 1.03
KCNC4-204ENST00000438661 TNMDQ9H2S6 317 aa21.5■■□□□ 1.03
KCNC4-204ENST00000438661 SPG7Q9UQ90 795 aa21.5■■□□□ 1.03
KCNC4-204ENST00000438661 HSPA4P34932 840 aa21.49■■□□□ 1.03
KCNC4-204ENST00000438661 FBXO38Q6PIJ6 1188 aa21.49■■□□□ 1.03
KCNC4-204ENST00000438661 SNX14Q9Y5W7 946 aa21.49■■□□□ 1.03
KCNC4-204ENST00000438661 CCDC61Q9Y6R9 512 aa21.49■■□□□ 1.03
KCNC4-204ENST00000438661 KIF24Q5T7B8 1368 aa21.49■■□□□ 1.03
KCNC4-204ENST00000438661 CCDC144BQ3MJ40 725 aa21.49■■□□□ 1.03
KCNC4-204ENST00000438661 CCDC144CPQ8IYA2 1237 aa21.49■■□□□ 1.03
KCNC4-204ENST00000438661 DACT1Q9NYF0 836 aa21.49■■□□□ 1.03
KCNC4-204ENST00000438661 TFIP11Q9UBB9 837 aaKnown RBP21.49■■□□□ 1.03
KCNC4-204ENST00000438661 METP08581 1390 aa21.49■■□□□ 1.03
KCNC4-204ENST00000438661 EIF4A2Q14240 407 aaKnown RBP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms